RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
HNRNPU-228ENST00000640306 SPAG11BQ08648 103 aa11.25□□□□□ -0.61
HNRNPU-228ENST00000640306 BAHCC1Q9P281 2608 aa11.24□□□□□ -0.61
HNRNPU-228ENST00000640306 LOC107984640A0A0U1RRK4 108 aa11.23□□□□□ -0.61
HNRNPU-228ENST00000640306 SMIM9A6NGZ8 99 aa11.23□□□□□ -0.61
HNRNPU-228ENST00000640306 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
HNRNPU-228ENST00000640306 USP17L23D6RBM5 183 aa11.23□□□□□ -0.61
HNRNPU-228ENST00000640306 TMEM256-PLSCR3K7ERE1 68 aa11.23□□□□□ -0.61
HNRNPU-228ENST00000640306 CYSRT1A8MQ03 144 aa11.22□□□□□ -0.61
HNRNPU-228ENST00000640306 XAGE1AQ9HD64 81 aa11.22□□□□□ -0.61
HNRNPU-228ENST00000640306 PKD1L1Q8TDX9 2849 aa11.22□□□□□ -0.61
HNRNPU-228ENST00000640306 NDUFC2O95298 119 aa11.22□□□□□ -0.61
HNRNPU-228ENST00000640306 FAM19A1Q7Z5A9 133 aa11.22□□□□□ -0.61
HNRNPU-228ENST00000640306 COX17Q14061 63 aa11.22□□□□□ -0.61
HNRNPU-228ENST00000640306 JMJD7-PLA2G4BH0Y9G9 81 aa11.21□□□□□ -0.62
HNRNPU-228ENST00000640306 ENHOQ6UWT2 76 aa11.21□□□□□ -0.62
HNRNPU-228ENST00000640306 LINC00167Q96N53 147 aa11.21□□□□□ -0.62
HNRNPU-228ENST00000640306 TRAV23DV6A0A075B6W5 121 aa11.2□□□□□ -0.62
HNRNPU-228ENST00000640306 LAMTOR3Q9UHA4 124 aa11.2□□□□□ -0.62
HNRNPU-228ENST00000640306 M0R2N4 97 aa11.2□□□□□ -0.62
HNRNPU-228ENST00000640306 LINC00575Q6W349 94 aa11.19□□□□□ -0.62
HNRNPU-228ENST00000640306 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
HNRNPU-228ENST00000640306 Q8NAQ8 132 aa11.17□□□□□ -0.62
HNRNPU-228ENST00000640306 CRYGAP11844 174 aa11.16□□□□□ -0.62
HNRNPU-228ENST00000640306 Q6ZQY7 126 aa11.16□□□□□ -0.62
HNRNPU-228ENST00000640306 SERP2Q8N6R1 65 aa11.16□□□□□ -0.62
HNRNPU-228ENST00000640306 APOC4P55056 127 aa11.15□□□□□ -0.62
HNRNPU-228ENST00000640306 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
HNRNPU-228ENST00000640306 RBM3P98179 157 aaKnown RBP11.15□□□□□ -0.63
HNRNPU-228ENST00000640306 TRBV10-3A0A0K0K1G6 114 aa11.14□□□□□ -0.63
HNRNPU-228ENST00000640306 UBL5Q9BZL1 73 aa11.14□□□□□ -0.63
HNRNPU-228ENST00000640306 SPART-AS1P0CW21 52 aa11.13□□□□□ -0.63
HNRNPU-228ENST00000640306 LELP1Q5T871 98 aa11.13□□□□□ -0.63
HNRNPU-228ENST00000640306 GHRHP01286 108 aa11.13□□□□□ -0.63
HNRNPU-228ENST00000640306 C6orf48Q9UBA6 75 aa11.12□□□□□ -0.63
HNRNPU-228ENST00000640306 HAMPP81172 84 aa11.12□□□□□ -0.63
HNRNPU-228ENST00000640306 Q6ZQT0 140 aa11.11□□□□□ -0.63
HNRNPU-228ENST00000640306 UPK3BQ9BT76 320 aa11.11□□□□□ -0.63
HNRNPU-228ENST00000640306 IGHV4-30-4P0DP06 118 aa11.1□□□□□ -0.63
HNRNPU-228ENST00000640306 IGLV6-57P01721 117 aa11.09□□□□□ -0.63
HNRNPU-228ENST00000640306 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
HNRNPU-228ENST00000640306 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
HNRNPU-228ENST00000640306 MIFP14174 115 aa11.09□□□□□ -0.63
HNRNPU-228ENST00000640306 WFDC10BQ8IUB3 73 aa11.09□□□□□ -0.63
HNRNPU-228ENST00000640306 DSCR8Q96T75 97 aa11.08□□□□□ -0.63
HNRNPU-228ENST00000640306 RETNQ9HD89 108 aa11.08□□□□□ -0.63
HNRNPU-228ENST00000640306 FBN1P35555 2871 aaKnown RBP11.08□□□□□ -0.64
HNRNPU-228ENST00000640306 PRR34Q9NV39 138 aa11.08□□□□□ -0.64
HNRNPU-228ENST00000640306 LYPD5Q6UWN5 251 aa11.07□□□□□ -0.64
HNRNPU-228ENST00000640306 SCXQ7RTU7 201 aa11.07□□□□□ -0.64
HNRNPU-228ENST00000640306 DIRC1Q969H9 104 aa11.06□□□□□ -0.64
HNRNPU-228ENST00000640306 CAMK2N2Q96S95 79 aa11.05□□□□□ -0.64
HNRNPU-228ENST00000640306 J3KT08 172 aa11.05□□□□□ -0.64
HNRNPU-228ENST00000640306 C20orf197Q8N268 126 aa11.05□□□□□ -0.64
HNRNPU-228ENST00000640306 ZNF73O43830 326 aaPredicted RBP11.04□□□□□ -0.64
HNRNPU-228ENST00000640306 ATP5EP2Q5VTU8 51 aa11.04□□□□□ -0.64
HNRNPU-228ENST00000640306 Q6ZVQ6 151 aa11.04□□□□□ -0.64
HNRNPU-228ENST00000640306 TENM3Q9P273 2699 aa11.03□□□□□ -0.64
HNRNPU-228ENST00000640306 FAM19A5Q7Z5A7 132 aaPredicted RBP11.03□□□□□ -0.64
HNRNPU-228ENST00000640306 LINC01547P58512 204 aaPredicted RBP11.03□□□□□ -0.64
HNRNPU-228ENST00000640306 STAB1Q9NY15 2570 aa11.02□□□□□ -0.64
HNRNPU-228ENST00000640306 Q6ZRU5 148 aa11.02□□□□□ -0.65
HNRNPU-228ENST00000640306 COX7BP24311 80 aa11.01□□□□□ -0.65
HNRNPU-228ENST00000640306 MAST4O15021 2626 aa11.01□□□□□ -0.65
HNRNPU-228ENST00000640306 KPRPQ5T749 579 aaPredicted RBP11.01□□□□□ -0.65
HNRNPU-228ENST00000640306 LOC110117498A0A087WWA1 95 aa11□□□□□ -0.65
HNRNPU-228ENST00000640306 MUC7Q8TAX7 377 aa11□□□□□ -0.65
HNRNPU-228ENST00000640306 KRTAP24-1Q3LI83 254 aa11□□□□□ -0.65
HNRNPU-228ENST00000640306 DPH3Q96FX2 82 aa11□□□□□ -0.65
HNRNPU-228ENST00000640306 TRAV10A0A0B4J240 114 aa10.99□□□□□ -0.65
HNRNPU-228ENST00000640306 TMEM258P61165 79 aa10.99□□□□□ -0.65
HNRNPU-228ENST00000640306 OXLD1Q5BKU9 147 aa10.99□□□□□ -0.65
HNRNPU-228ENST00000640306 Q6ZTC4 211 aa10.99□□□□□ -0.65
HNRNPU-228ENST00000640306 OXTP01178 125 aa10.98□□□□□ -0.65
HNRNPU-228ENST00000640306 GVQW2A0A096LPI5 108 aaPredicted RBP10.98□□□□□ -0.65
HNRNPU-228ENST00000640306 VPREB1P12018 145 aa10.98□□□□□ -0.65
HNRNPU-228ENST00000640306 ANK2Q01484 3957 aa10.95□□□□□ -0.66
HNRNPU-228ENST00000640306 ELOF1P60002 83 aaKnown RBP10.95□□□□□ -0.66
HNRNPU-228ENST00000640306 C15orf56Q8N910 161 aa10.95□□□□□ -0.66
HNRNPU-228ENST00000640306 IGKV2D-24A0A075B6R9 120 aa10.94□□□□□ -0.66
HNRNPU-228ENST00000640306 SNURFQ9Y675 71 aa10.94□□□□□ -0.66
HNRNPU-228ENST00000640306 COL6A5A8TX70 2615 aa10.94□□□□□ -0.66
HNRNPU-228ENST00000640306 ESRGQ1W209 222 aa10.93□□□□□ -0.66
HNRNPU-228ENST00000640306 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.93□□□□□ -0.66
HNRNPU-228ENST00000640306 Q6ZRP5 223 aa10.93□□□□□ -0.66
HNRNPU-228ENST00000640306 Q8N9L7 120 aa10.93□□□□□ -0.66
HNRNPU-228ENST00000640306 DEFB105AQ8NG35 78 aa10.93□□□□□ -0.66
HNRNPU-228ENST00000640306 NOTCH1P46531 2555 aa10.93□□□□□ -0.66
HNRNPU-228ENST00000640306 KRTAP26-1Q6PEX3 210 aa10.92□□□□□ -0.66
HNRNPU-228ENST00000640306 TRBV7-4A0A0J9YYF1 115 aa10.91□□□□□ -0.66
HNRNPU-228ENST00000640306 M0R378 163 aa10.91□□□□□ -0.66
HNRNPU-228ENST00000640306 NDUFC2-KCTD14E9PQ53 114 aa10.91□□□□□ -0.66
HNRNPU-228ENST00000640306 EGFEM1PQ0D2K5 195 aa10.91□□□□□ -0.66
HNRNPU-228ENST00000640306 C1orf43Q9BWL3 253 aa10.91□□□□□ -0.66
HNRNPU-228ENST00000640306 RPS28P62857 69 aaKnown RBP10.89□□□□□ -0.67
HNRNPU-228ENST00000640306 PDE6GP18545 87 aa10.88□□□□□ -0.67
HNRNPU-228ENST00000640306 KRTAP10-11P60412 298 aa10.88□□□□□ -0.67
HNRNPU-228ENST00000640306 LINC00528Q8N1L1 170 aa10.88□□□□□ -0.67
HNRNPU-228ENST00000640306 RMI2Q96E14 147 aa10.88□□□□□ -0.67
HNRNPU-228ENST00000640306 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms