RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 LIMD2Q9BT23 127 aa5.76□□□□□ -1.49
PTP4A1-207ENST00000639568 SND1-IT1Q9HBX3 110 aa5.76□□□□□ -1.49
PTP4A1-207ENST00000639568 CYSLTR1Q9Y271 337 aa5.76□□□□□ -1.49
PTP4A1-207ENST00000639568 LOC389332A0A1B0GUA5 103 aa5.75□□□□□ -1.49
PTP4A1-207ENST00000639568 SMIM1B2RUZ4 78 aa5.75□□□□□ -1.49
PTP4A1-207ENST00000639568 ZNF345Q14585 488 aa5.75□□□□□ -1.49
PTP4A1-207ENST00000639568 ETDCA0A1B0GVM5 59 aa5.74□□□□□ -1.49
PTP4A1-207ENST00000639568 CEBPGP53567 150 aa5.74□□□□□ -1.49
PTP4A1-207ENST00000639568 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
PTP4A1-207ENST00000639568 NAT8BQ9UHF3 227 aa5.74□□□□□ -1.49
PTP4A1-207ENST00000639568 PPBPP02775 128 aa5.73□□□□□ -1.49
PTP4A1-207ENST00000639568 MT2AP02795 61 aa5.73□□□□□ -1.49
PTP4A1-207ENST00000639568 A0A1B0GW15 77 aa5.72□□□□□ -1.49
PTP4A1-207ENST00000639568 F8W036 122 aa5.72□□□□□ -1.49
PTP4A1-207ENST00000639568 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
PTP4A1-207ENST00000639568 OSTCQ9NRP0 149 aa5.72□□□□□ -1.49
PTP4A1-207ENST00000639568 TMEM250H0YL14 139 aa5.71□□□□□ -1.5
PTP4A1-207ENST00000639568 PRYO14603 147 aa5.71□□□□□ -1.5
PTP4A1-207ENST00000639568 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
PTP4A1-207ENST00000639568 SMLR1H3BR10 107 aa5.7□□□□□ -1.5
PTP4A1-207ENST00000639568 SPINK8P0C7L1 97 aa5.7□□□□□ -1.5
PTP4A1-207ENST00000639568 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
PTP4A1-207ENST00000639568 ORMDL3Q8N138 153 aa5.7□□□□□ -1.5
PTP4A1-207ENST00000639568 Q8NDZ9 215 aa5.7□□□□□ -1.5
PTP4A1-207ENST00000639568 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
PTP4A1-207ENST00000639568 IGIPA6NJ69 53 aa5.69□□□□□ -1.5
PTP4A1-207ENST00000639568 S100A8P05109 93 aa5.69□□□□□ -1.5
PTP4A1-207ENST00000639568 COX17Q14061 63 aa5.69□□□□□ -1.5
PTP4A1-207ENST00000639568 TMEM136Q6ZRR5 245 aa5.69□□□□□ -1.5
PTP4A1-207ENST00000639568 PRELID3AQ96N28 172 aa5.69□□□□□ -1.5
PTP4A1-207ENST00000639568 ERG28Q9UKR5 140 aa5.69□□□□□ -1.5
PTP4A1-207ENST00000639568 V9GYV3 84 aa5.69□□□□□ -1.5
PTP4A1-207ENST00000639568 C20orf202A1L168 122 aa5.68□□□□□ -1.5
PTP4A1-207ENST00000639568 MT1FP04733 61 aa5.68□□□□□ -1.5
PTP4A1-207ENST00000639568 FAM74A3Q4VXF1 159 aa5.68□□□□□ -1.5
PTP4A1-207ENST00000639568 SMIM7Q9BQ49 75 aa5.68□□□□□ -1.5
PTP4A1-207ENST00000639568 TINCRA0A1B0GVN0 87 aa5.67□□□□□ -1.5
PTP4A1-207ENST00000639568 HMSDA8MTL9 139 aa5.67□□□□□ -1.5
PTP4A1-207ENST00000639568 S100A12P80511 92 aa5.67□□□□□ -1.5
PTP4A1-207ENST00000639568 ORMDL2Q53FV1 153 aa5.67□□□□□ -1.5
PTP4A1-207ENST00000639568 TRAV9-1A0A075B6T8 112 aa5.66□□□□□ -1.5
PTP4A1-207ENST00000639568 PRSS47A8MTI9 375 aa5.66□□□□□ -1.5
PTP4A1-207ENST00000639568 ERC2-IT1O76042 136 aa5.66□□□□□ -1.5
PTP4A1-207ENST00000639568 SPRR1AP35321 89 aa5.66□□□□□ -1.5
PTP4A1-207ENST00000639568 KCNQ1DNQ9H478 68 aa5.66□□□□□ -1.5
PTP4A1-207ENST00000639568 MAP1LC3AQ9H492 121 aa5.66□□□□□ -1.5
PTP4A1-207ENST00000639568 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.5
PTP4A1-207ENST00000639568 H3BRM9 83 aa5.65□□□□□ -1.5
PTP4A1-207ENST00000639568 MRPL54Q6P161 138 aaKnown RBP5.65□□□□□ -1.5
PTP4A1-207ENST00000639568 ZNF625Q96I27 306 aaPredicted RBP5.65□□□□□ -1.5
PTP4A1-207ENST00000639568 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
PTP4A1-207ENST00000639568 G0S2P27469 103 aa5.64□□□□□ -1.51
PTP4A1-207ENST00000639568 Q8N8P6 123 aa5.64□□□□□ -1.51
PTP4A1-207ENST00000639568 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
PTP4A1-207ENST00000639568 ATP11AUNQ6ZP68 121 aa5.63□□□□□ -1.51
PTP4A1-207ENST00000639568 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
PTP4A1-207ENST00000639568 K7EMI3 77 aa5.62□□□□□ -1.51
PTP4A1-207ENST00000639568 NCR3O14931 201 aa5.62□□□□□ -1.51
PTP4A1-207ENST00000639568 LINC00158P58513 81 aa5.62□□□□□ -1.51
PTP4A1-207ENST00000639568 RPL23P62829 140 aaKnown RBP5.62□□□□□ -1.51
PTP4A1-207ENST00000639568 LAMTOR2Q9Y2Q5 125 aa5.62□□□□□ -1.51
PTP4A1-207ENST00000639568 KIAA1644Q3SXP7 199 aa5.61□□□□□ -1.51
PTP4A1-207ENST00000639568 BATF3Q9NR55 127 aa5.61□□□□□ -1.51
PTP4A1-207ENST00000639568 LGALS3P17931 250 aaKnown RBP5.6□□□□□ -1.51
PTP4A1-207ENST00000639568 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
PTP4A1-207ENST00000639568 Q9BRP9 147 aa5.6□□□□□ -1.51
PTP4A1-207ENST00000639568 TRBV20-1A0A075B6N2 111 aa5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 TRIAP1O43715 76 aa5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 ATP6V1G1O75348 118 aa5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 SFTA2Q6UW10 78 aa5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 ERASQ7Z444 233 aa5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 BOD1L2Q8IYS8 172 aa5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 TOMM6Q96B49 74 aa5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 CHTOPQ9Y3Y2 248 aaKnown RBP5.59□□□□□ -1.51
PTP4A1-207ENST00000639568 A0A1B0GXF2 115 aa5.58□□□□□ -1.52
PTP4A1-207ENST00000639568 PMVKQ15126 192 aa5.58□□□□□ -1.52
PTP4A1-207ENST00000639568 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
PTP4A1-207ENST00000639568 Q6ZRX8 168 aa5.58□□□□□ -1.52
PTP4A1-207ENST00000639568 CST9LQ9H4G1 147 aa5.58□□□□□ -1.52
PTP4A1-207ENST00000639568 IGLV5-39A0A0G2JS06 123 aa5.57□□□□□ -1.52
PTP4A1-207ENST00000639568 A0A0U1RRA0 63 aa5.57□□□□□ -1.52
PTP4A1-207ENST00000639568 H7C2G1 150 aa5.57□□□□□ -1.52
PTP4A1-207ENST00000639568 JOSD1Q15040 202 aaPredicted RBP5.57□□□□□ -1.52
PTP4A1-207ENST00000639568 C1orf195Q5TG92 126 aa5.57□□□□□ -1.52
PTP4A1-207ENST00000639568 SLC25A34Q6PIV7 304 aa5.57□□□□□ -1.52
PTP4A1-207ENST00000639568 NXT2Q9NPJ8 142 aaKnown RBP5.57□□□□□ -1.52
PTP4A1-207ENST00000639568 ADIRFQ15847 76 aa5.56□□□□□ -1.52
PTP4A1-207ENST00000639568 ADCYAP1P18509 176 aa5.55□□□□□ -1.52
PTP4A1-207ENST00000639568 ALKAL2Q6UX46 152 aa5.55□□□□□ -1.52
PTP4A1-207ENST00000639568 CD164Q04900 197 aa5.54□□□□□ -1.52
PTP4A1-207ENST00000639568 ST20-AS1Q8NBB2 130 aa5.54□□□□□ -1.52
PTP4A1-207ENST00000639568 BLOC1S1P78537 153 aa5.53□□□□□ -1.52
PTP4A1-207ENST00000639568 ATP5L2Q7Z4Y8 100 aa5.53□□□□□ -1.52
PTP4A1-207ENST00000639568 C20orf166-AS1Q96NR2 134 aa5.53□□□□□ -1.52
PTP4A1-207ENST00000639568 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
PTP4A1-207ENST00000639568 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
PTP4A1-207ENST00000639568 DDTP30046 118 aa5.52□□□□□ -1.53
PTP4A1-207ENST00000639568 C10orf91Q5T1B1 145 aa5.52□□□□□ -1.53
PTP4A1-207ENST00000639568 Q5XG85 94 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms