RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 FAM30AQ9NZY2 134 aa11.53□□□□□ -0.56
SCARB2-210ENST00000638567 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
SCARB2-210ENST00000638567 Q6ZRU5 148 aa11.53□□□□□ -0.56
SCARB2-210ENST00000638567 ITPR3Q14573 2671 aa11.52□□□□□ -0.56
SCARB2-210ENST00000638567 FSHBP01225 129 aa11.52□□□□□ -0.57
SCARB2-210ENST00000638567 ATP5EP56381 51 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-210ENST00000638567 LINC01547P58512 204 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-210ENST00000638567 IGKV4-1P06312 121 aa11.51□□□□□ -0.57
SCARB2-210ENST00000638567 FRYLO94915 3013 aa11.51□□□□□ -0.57
SCARB2-210ENST00000638567 MGAM2Q2M2H8 2515 aa11.5□□□□□ -0.57
SCARB2-210ENST00000638567 ATRQ13535 2644 aa11.5□□□□□ -0.57
SCARB2-210ENST00000638567 A0A0U1RQV1 116 aa11.5□□□□□ -0.57
SCARB2-210ENST00000638567 C10orf25Q5T742 122 aa11.5□□□□□ -0.57
SCARB2-210ENST00000638567 COL6A3P12111 3177 aa11.5□□□□□ -0.57
SCARB2-210ENST00000638567 X6R8D5 127 aa11.49□□□□□ -0.57
SCARB2-210ENST00000638567 CHKB-CPT1BH3BT56 60 aa11.49□□□□□ -0.57
SCARB2-210ENST00000638567 SMIM26A0A096LP01 95 aa11.47□□□□□ -0.57
SCARB2-210ENST00000638567 FREM2Q5SZK8 3169 aa11.47□□□□□ -0.57
SCARB2-210ENST00000638567 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
SCARB2-210ENST00000638567 EYSQ5T1H1 3165 aa11.46□□□□□ -0.57
SCARB2-210ENST00000638567 BOD1L1Q8NFC6 3051 aa11.46□□□□□ -0.57
SCARB2-210ENST00000638567 SERP1Q9Y6X1 66 aa11.46□□□□□ -0.58
SCARB2-210ENST00000638567 Q8N9L7 120 aa11.45□□□□□ -0.58
SCARB2-210ENST00000638567 HELZ2Q9BYK8 2649 aaKnown RBP11.45□□□□□ -0.58
SCARB2-210ENST00000638567 C6orf48Q9UBA6 75 aa11.44□□□□□ -0.58
SCARB2-210ENST00000638567 CRYGAP11844 174 aa11.43□□□□□ -0.58
SCARB2-210ENST00000638567 SPATA3Q8NHX4 192 aa11.43□□□□□ -0.58
SCARB2-210ENST00000638567 SMCR5Q8TEV8 140 aa11.42□□□□□ -0.58
SCARB2-210ENST00000638567 LRCOL1A6NCL2 159 aa11.42□□□□□ -0.58
SCARB2-210ENST00000638567 MAST4O15021 2626 aa11.41□□□□□ -0.58
SCARB2-210ENST00000638567 TMEM254Q8TBM7 123 aa11.41□□□□□ -0.58
SCARB2-210ENST00000638567 SPTSSBQ8NFR3 76 aa11.41□□□□□ -0.58
SCARB2-210ENST00000638567 M0R2N4 97 aa11.4□□□□□ -0.58
SCARB2-210ENST00000638567 REG3GQ6UW15 175 aa11.4□□□□□ -0.58
SCARB2-210ENST00000638567 PLAC8L1A1L4L8 177 aa11.4□□□□□ -0.59
SCARB2-210ENST00000638567 PRYO14603 147 aa11.4□□□□□ -0.59
SCARB2-210ENST00000638567 CXCL6P80162 114 aa11.38□□□□□ -0.59
SCARB2-210ENST00000638567 SPINK6Q6UWN8 80 aa11.38□□□□□ -0.59
SCARB2-210ENST00000638567 MRPL55Q7Z7F7 128 aaKnown RBP11.38□□□□□ -0.59
SCARB2-210ENST00000638567 IGLV9-49A0A0B4J1Y8 123 aa11.37□□□□□ -0.59
SCARB2-210ENST00000638567 NHLRC4P0CG21 123 aaPredicted RBP11.37□□□□□ -0.59
SCARB2-210ENST00000638567 LINC00208Q96KT6 92 aa11.37□□□□□ -0.59
SCARB2-210ENST00000638567 A0A087WSZ3 146 aa11.37□□□□□ -0.59
SCARB2-210ENST00000638567 A0A096LNT2 108 aa11.36□□□□□ -0.59
SCARB2-210ENST00000638567 ESRGQ1W209 222 aa11.36□□□□□ -0.59
SCARB2-210ENST00000638567 DEFB116Q30KQ4 102 aa11.36□□□□□ -0.59
SCARB2-210ENST00000638567 C4orf48Q5BLP8 95 aa11.36□□□□□ -0.59
SCARB2-210ENST00000638567 C7orf33Q8WU49 177 aa11.36□□□□□ -0.59
SCARB2-210ENST00000638567 Q6ZQT0 140 aa11.35□□□□□ -0.59
SCARB2-210ENST00000638567 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
SCARB2-210ENST00000638567 CSNK1G2-AS1Q8NCQ2 148 aa11.34□□□□□ -0.59
SCARB2-210ENST00000638567 REV3LO60673 3130 aa11.34□□□□□ -0.59
SCARB2-210ENST00000638567 ADGRG4Q8IZF6 3080 aa11.34□□□□□ -0.59
SCARB2-210ENST00000638567 IL17DQ8TAD2 202 aa11.34□□□□□ -0.59
SCARB2-210ENST00000638567 F8WDY8 70 aa11.34□□□□□ -0.59
SCARB2-210ENST00000638567 GIG44P09565 113 aaPredicted RBP11.33□□□□□ -0.6
SCARB2-210ENST00000638567 CHD6Q8TD26 2715 aa11.32□□□□□ -0.6
SCARB2-210ENST00000638567 PRLHP81277 87 aa11.32□□□□□ -0.6
SCARB2-210ENST00000638567 C22orf24Q9Y442 160 aa11.32□□□□□ -0.6
SCARB2-210ENST00000638567 Q8NAQ8 132 aa11.31□□□□□ -0.6
SCARB2-210ENST00000638567 LINC01556Q5JQF7 62 aa11.31□□□□□ -0.6
SCARB2-210ENST00000638567 ELOF1P60002 83 aaKnown RBP11.3□□□□□ -0.6
SCARB2-210ENST00000638567 Q9BRP9 147 aa11.3□□□□□ -0.6
SCARB2-210ENST00000638567 V9GYY9 64 aa11.3□□□□□ -0.6
SCARB2-210ENST00000638567 ATMQ13315 3056 aa11.29□□□□□ -0.6
SCARB2-210ENST00000638567 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
SCARB2-210ENST00000638567 LINC00167Q96N53 147 aa11.27□□□□□ -0.6
SCARB2-210ENST00000638567 TRBV7-6A0A0J9YX20 115 aa11.27□□□□□ -0.61
SCARB2-210ENST00000638567 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
SCARB2-210ENST00000638567 C19orf73Q9NVV2 129 aa11.26□□□□□ -0.61
SCARB2-210ENST00000638567 TEP1Q99973 2627 aaKnown RBP11.25□□□□□ -0.61
SCARB2-210ENST00000638567 CASC2Q6XLA1 102 aa11.25□□□□□ -0.61
SCARB2-210ENST00000638567 DMXL2Q8TDJ6 3036 aa11.25□□□□□ -0.61
SCARB2-210ENST00000638567 ZNF706Q9Y5V0 76 aaPredicted RBP11.25□□□□□ -0.61
SCARB2-210ENST00000638567 SMIM29Q86T20 159 aa11.25□□□□□ -0.61
SCARB2-210ENST00000638567 RPS28P62857 69 aaKnown RBP11.24□□□□□ -0.61
SCARB2-210ENST00000638567 IGLV6-57P01721 117 aa11.23□□□□□ -0.61
SCARB2-210ENST00000638567 A6NED7 52 aa11.23□□□□□ -0.61
SCARB2-210ENST00000638567 HCG22E2RYF7 251 aa11.23□□□□□ -0.61
SCARB2-210ENST00000638567 BCE1O60756 84 aa11.23□□□□□ -0.61
SCARB2-210ENST00000638567 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
SCARB2-210ENST00000638567 SVIPQ8NHG7 77 aa11.22□□□□□ -0.61
SCARB2-210ENST00000638567 TM2D3Q9BRN9 247 aa11.22□□□□□ -0.61
SCARB2-210ENST00000638567 FLNCQ14315 2725 aa11.22□□□□□ -0.61
SCARB2-210ENST00000638567 KALRNO60229 2985 aa11.22□□□□□ -0.61
SCARB2-210ENST00000638567 H3BNG1 76 aa11.21□□□□□ -0.61
SCARB2-210ENST00000638567 VPREB1P12018 145 aa11.21□□□□□ -0.62
SCARB2-210ENST00000638567 IGSF10Q6WRI0 2623 aa11.21□□□□□ -0.62
SCARB2-210ENST00000638567 GVQW2A0A096LPI5 108 aaPredicted RBP11.21□□□□□ -0.62
SCARB2-210ENST00000638567 PSPHP1O15172 72 aa11.19□□□□□ -0.62
SCARB2-210ENST00000638567 C4orf26Q17RF5 130 aa11.19□□□□□ -0.62
SCARB2-210ENST00000638567 C1orf195Q5TG92 126 aa11.19□□□□□ -0.62
SCARB2-210ENST00000638567 Q6ZRP5 223 aa11.19□□□□□ -0.62
SCARB2-210ENST00000638567 FAM104AQ969W3 186 aa11.19□□□□□ -0.62
SCARB2-210ENST00000638567 H0Y9P7 68 aa11.17□□□□□ -0.62
SCARB2-210ENST00000638567 Q6ZRX8 168 aa11.17□□□□□ -0.62
SCARB2-210ENST00000638567 CFAP47Q6ZTR5 3102 aa11.17□□□□□ -0.62
SCARB2-210ENST00000638567 IGHV6-1A0A0B4J1U7 121 aa11.17□□□□□ -0.62
SCARB2-210ENST00000638567 PCOTHQ58A44 107 aa11.17□□□□□ -0.62
SCARB2-210ENST00000638567 ST20-AS1Q8NBB2 130 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms