RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
SCN1B-206ENST00000638536 SMIM13P0DJ93 91 aa13.29□□□□□ -0.28
SCN1B-206ENST00000638536 MT1HL1P0DM35 61 aa13.29□□□□□ -0.28
SCN1B-206ENST00000638536 LINC00158P58513 81 aa13.29□□□□□ -0.28
SCN1B-206ENST00000638536 LINC00167Q96N53 147 aa13.29□□□□□ -0.28
SCN1B-206ENST00000638536 TP73-AS1Q9UF72 201 aa13.29□□□□□ -0.28
SCN1B-206ENST00000638536 GAGE10A6NGK3 116 aa13.28□□□□□ -0.28
SCN1B-206ENST00000638536 IGLV5-37A0A075B6J1 123 aa13.28□□□□□ -0.28
SCN1B-206ENST00000638536 RPL37AP8A6NKH3 93 aa13.28□□□□□ -0.28
SCN1B-206ENST00000638536 C3orf79P0CE67 100 aa13.28□□□□□ -0.28
SCN1B-206ENST00000638536 LBHQ53QV2 105 aaPredicted RBP13.28□□□□□ -0.28
SCN1B-206ENST00000638536 VPREB1P12018 145 aa13.27□□□□□ -0.29
SCN1B-206ENST00000638536 LINC01545Q5VT33 79 aa13.27□□□□□ -0.29
SCN1B-206ENST00000638536 J3QQQ9 107 aa13.26□□□□□ -0.29
SCN1B-206ENST00000638536 MEIG1Q5JSS6 88 aa13.25□□□□□ -0.29
SCN1B-206ENST00000638536 PLEKHB2Q96CS7 222 aa13.25□□□□□ -0.29
SCN1B-206ENST00000638536 PET117Q6UWS5 81 aa13.24□□□□□ -0.29
SCN1B-206ENST00000638536 MYMXA0A1B0GTQ4 84 aa13.24□□□□□ -0.29
SCN1B-206ENST00000638536 HERVK_113P61574 105 aa13.24□□□□□ -0.29
SCN1B-206ENST00000638536 HERV-K104P63124 156 aa13.24□□□□□ -0.29
SCN1B-206ENST00000638536 LINC00518Q8N0U6 118 aa13.24□□□□□ -0.29
SCN1B-206ENST00000638536 NKAPP1Q8N9T2 125 aa13.24□□□□□ -0.29
SCN1B-206ENST00000638536 S100A6P06703 90 aa13.23□□□□□ -0.29
SCN1B-206ENST00000638536 KRTDAPP60985 99 aa13.23□□□□□ -0.29
SCN1B-206ENST00000638536 MIR7-3HGQ8N6C7 128 aa13.23□□□□□ -0.29
SCN1B-206ENST00000638536 LINC01600Q96MT4 127 aa13.21□□□□□ -0.29
SCN1B-206ENST00000638536 E9PLD3 99 aa13.21□□□□□ -0.3
SCN1B-206ENST00000638536 DAND5Q8N907 189 aa13.21□□□□□ -0.3
SCN1B-206ENST00000638536 IGKV2-28A0A075B6P5 120 aa13.2□□□□□ -0.3
SCN1B-206ENST00000638536 C5orf52A6NGY3 159 aa13.2□□□□□ -0.3
SCN1B-206ENST00000638536 IGKV2D-28P01615 120 aa13.2□□□□□ -0.3
SCN1B-206ENST00000638536 LGALS3P17931 250 aaKnown RBP13.19□□□□□ -0.3
SCN1B-206ENST00000638536 REG3GQ6UW15 175 aa13.18□□□□□ -0.3
SCN1B-206ENST00000638536 AKR1D1P51857 326 aa13.17□□□□□ -0.3
SCN1B-206ENST00000638536 RPL24P83731 157 aaKnown RBP13.17□□□□□ -0.3
SCN1B-206ENST00000638536 IGKV2D-26A0A0A0MRZ7 120 aa13.17□□□□□ -0.3
SCN1B-206ENST00000638536 H0Y9J4 135 aa13.17□□□□□ -0.3
SCN1B-206ENST00000638536 HIST3H2BBQ8N257 126 aa13.17□□□□□ -0.3
SCN1B-206ENST00000638536 IGLV1-50A0A075B6I6 118 aa13.16□□□□□ -0.3
SCN1B-206ENST00000638536 NMUP48645 174 aa13.16□□□□□ -0.3
SCN1B-206ENST00000638536 SNRPEP62304 92 aaKnown RBP13.16□□□□□ -0.3
SCN1B-206ENST00000638536 DIRC1Q969H9 104 aa13.16□□□□□ -0.3
SCN1B-206ENST00000638536 BOD1L2Q8IYS8 172 aa13.15□□□□□ -0.3
SCN1B-206ENST00000638536 ZNF861PO60384 105 aa13.14□□□□□ -0.31
SCN1B-206ENST00000638536 BCE1O60756 84 aa13.14□□□□□ -0.31
SCN1B-206ENST00000638536 TTTY13Q9BZ97 58 aa13.14□□□□□ -0.31
SCN1B-206ENST00000638536 LINC00587B1AMM8 73 aa13.13□□□□□ -0.31
SCN1B-206ENST00000638536 KRTAP10-8P60410 259 aa13.13□□□□□ -0.31
SCN1B-206ENST00000638536 A0A0J9YXY3 114 aa13.13□□□□□ -0.31
SCN1B-206ENST00000638536 TMEM238C9JI98 176 aa13.13□□□□□ -0.31
SCN1B-206ENST00000638536 SMIM6P0DI80 62 aa13.13□□□□□ -0.31
SCN1B-206ENST00000638536 ATOH7Q8N100 152 aa13.13□□□□□ -0.31
SCN1B-206ENST00000638536 HIST1H2BLQ99880 126 aa13.13□□□□□ -0.31
SCN1B-206ENST00000638536 ADAMTSL4-AS1Q5T5F5 129 aa13.12□□□□□ -0.31
SCN1B-206ENST00000638536 EIF4EBP3O60516 100 aaPredicted RBP13.11□□□□□ -0.31
SCN1B-206ENST00000638536 KRTAP1-4P0C5Y4 121 aa13.11□□□□□ -0.31
SCN1B-206ENST00000638536 C12orf57Q99622 126 aa13.11□□□□□ -0.31
SCN1B-206ENST00000638536 HMCN2Q8NDA2 5059 aa13.11□□□□□ -0.31
SCN1B-206ENST00000638536 NCR3O14931 201 aa13.1□□□□□ -0.31
SCN1B-206ENST00000638536 S100A12P80511 92 aa13.1□□□□□ -0.31
SCN1B-206ENST00000638536 KRTAP13-1Q8IUC0 172 aa13.1□□□□□ -0.31
SCN1B-206ENST00000638536 LOC107984156A0A0G2JMH3 177 aa13.09□□□□□ -0.31
SCN1B-206ENST00000638536 M0R378 163 aa13.09□□□□□ -0.31
SCN1B-206ENST00000638536 ANKRD39Q53RE8 183 aa13.09□□□□□ -0.31
SCN1B-206ENST00000638536 ARL17AQ8IVW1 177 aa13.09□□□□□ -0.31
SCN1B-206ENST00000638536 TMEM126AQ9H061 195 aa13.09□□□□□ -0.31
SCN1B-206ENST00000638536 SOSTDC1Q6X4U4 206 aa13.08□□□□□ -0.32
SCN1B-206ENST00000638536 NPC2P61916 151 aa13.07□□□□□ -0.32
SCN1B-206ENST00000638536 LITAFQ99732 161 aa13.07□□□□□ -0.32
SCN1B-206ENST00000638536 C20orf202A1L168 122 aa13.06□□□□□ -0.32
SCN1B-206ENST00000638536 S100A2P29034 98 aa13.06□□□□□ -0.32
SCN1B-206ENST00000638536 PRR26Q8N8Z3 221 aa13.06□□□□□ -0.32
SCN1B-206ENST00000638536 RPL28P46779 137 aaKnown RBP13.06□□□□□ -0.32
SCN1B-206ENST00000638536 ZNF815PA8K554 130 aa13.05□□□□□ -0.32
SCN1B-206ENST00000638536 PRLHP81277 87 aa13.05□□□□□ -0.32
SCN1B-206ENST00000638536 UBE2AP49459 152 aa13.03□□□□□ -0.32
SCN1B-206ENST00000638536 FAM19A1Q7Z5A9 133 aa13.02□□□□□ -0.32
SCN1B-206ENST00000638536 TRBV10-3A0A0K0K1G6 114 aa13.02□□□□□ -0.33
SCN1B-206ENST00000638536 PCP2Q8IVA1 136 aa12.99□□□□□ -0.33
SCN1B-206ENST00000638536 MIEN1Q9BRT3 115 aa12.99□□□□□ -0.33
SCN1B-206ENST00000638536 KCNQ1DNQ9H478 68 aa12.98□□□□□ -0.33
SCN1B-206ENST00000638536 ANAPC11Q9NYG5 84 aa12.98□□□□□ -0.33
SCN1B-206ENST00000638536 TIMM17BO60830 172 aa12.97□□□□□ -0.33
SCN1B-206ENST00000638536 LINC00308Q8TCZ7 52 aa12.97□□□□□ -0.33
SCN1B-206ENST00000638536 PCP4L1A6NKN8 68 aa12.96□□□□□ -0.33
SCN1B-206ENST00000638536 PRYO14603 147 aa12.95□□□□□ -0.34
SCN1B-206ENST00000638536 NDUFC2O95298 119 aa12.95□□□□□ -0.34
SCN1B-206ENST00000638536 SPRR1AP35321 89 aa12.95□□□□□ -0.34
SCN1B-206ENST00000638536 SPANXB1Q9NS25 103 aaPredicted RBP12.95□□□□□ -0.34
SCN1B-206ENST00000638536 TRBV10-2A0A0K0K1G8 114 aa12.95□□□□□ -0.34
SCN1B-206ENST00000638536 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
SCN1B-206ENST00000638536 A0A087X002 238 aa12.94□□□□□ -0.34
SCN1B-206ENST00000638536 DDTP30046 118 aa12.94□□□□□ -0.34
SCN1B-206ENST00000638536 IGLV6-57P01721 117 aa12.91□□□□□ -0.34
SCN1B-206ENST00000638536 SCGB1D4Q6XE38 83 aa12.91□□□□□ -0.34
SCN1B-206ENST00000638536 LINC00337Q8N6G1 96 aa12.91□□□□□ -0.34
SCN1B-206ENST00000638536 HIGD2AQ9BW72 106 aa12.91□□□□□ -0.34
SCN1B-206ENST00000638536 S100A7L2Q5SY68 101 aa12.88□□□□□ -0.35
SCN1B-206ENST00000638536 SPANXCQ9NY87 97 aa12.88□□□□□ -0.35
SCN1B-206ENST00000638536 SCGB1D1O95968 90 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms