RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	7.62	□□□□□ -1.19
CLN6-223	ENST00000637823	NDUFC2	O95298	119 aa		7.62	□□□□□ -1.19
CLN6-223	ENST00000637823		Q6ZRP5	223 aa		7.62	□□□□□ -1.19
CLN6-223	ENST00000637823	PRO1854	Q9UHT4	67 aa		7.62	□□□□□ -1.19
CLN6-223	ENST00000637823		K7ERJ3	54 aa		7.61	□□□□□ -1.19
CLN6-223	ENST00000637823	TAX1BP3	O14907	124 aa		7.61	□□□□□ -1.19
CLN6-223	ENST00000637823	GAGE2E	Q4V326	116 aa		7.61	□□□□□ -1.19
CLN6-223	ENST00000637823	C9orf163	Q8N9P6	203 aa		7.61	□□□□□ -1.19
CLN6-223	ENST00000637823	GAGE2D	Q9UEU5	116 aa		7.61	□□□□□ -1.19
CLN6-223	ENST00000637823	PKIG	Q9Y2B9	76 aa		7.61	□□□□□ -1.19
CLN6-223	ENST00000637823	RTL8C	O15255	209 aa		7.6	□□□□□ -1.19
CLN6-223	ENST00000637823	RPL18A	Q02543	176 aa	Known RBP	7.6	□□□□□ -1.19
CLN6-223	ENST00000637823	XAGE1A	Q9HD64	81 aa		7.6	□□□□□ -1.19
CLN6-223	ENST00000637823	IGKV2-28	A0A075B6P5	120 aa		7.58	□□□□□ -1.2
CLN6-223	ENST00000637823	TRAV13-2	A0A0B4J235	113 aa		7.58	□□□□□ -1.2
CLN6-223	ENST00000637823	C9orf118	A6NHY6	69 aa		7.58	□□□□□ -1.2
CLN6-223	ENST00000637823	IGKV2D-28	P01615	120 aa		7.58	□□□□□ -1.2
CLN6-223	ENST00000637823	TNP2	Q05952	138 aa		7.58	□□□□□ -1.2
CLN6-223	ENST00000637823	GAGE2B	Q13066	116 aa		7.57	□□□□□ -1.2
CLN6-223	ENST00000637823	C9orf129	Q5T035	196 aa	Known RBP	7.57	□□□□□ -1.2
CLN6-223	ENST00000637823	PLA2G2D	Q9UNK4	145 aa		7.57	□□□□□ -1.2
CLN6-223	ENST00000637823	DNAH2	Q9P225	4427 aa		7.57	□□□□□ -1.2
CLN6-223	ENST00000637823	TRBV10-2	A0A0K0K1G8	114 aa		7.56	□□□□□ -1.2
CLN6-223	ENST00000637823	C16orf90	A8MZG2	172 aa		7.56	□□□□□ -1.2
CLN6-223	ENST00000637823	RPL13A	P40429	203 aa	Known RBP	7.56	□□□□□ -1.2
CLN6-223	ENST00000637823	PRR3	P79522	188 aa	Known RBP	7.56	□□□□□ -1.2
CLN6-223	ENST00000637823	SDIM1	Q6ZPB5	146 aa		7.56	□□□□□ -1.2
CLN6-223	ENST00000637823	LINC00337	Q8N6G1	96 aa		7.56	□□□□□ -1.2
CLN6-223	ENST00000637823		Q8NDZ9	215 aa		7.56	□□□□□ -1.2
CLN6-223	ENST00000637823	KRTAP17-1	Q9BYP8	105 aa		7.56	□□□□□ -1.2
CLN6-223	ENST00000637823	TSPAN13	O95857	204 aa		7.55	□□□□□ -1.2
CLN6-223	ENST00000637823	VPREB1	P12018	145 aa		7.55	□□□□□ -1.2
CLN6-223	ENST00000637823	FRAS1	Q86XX4	4008 aa		7.55	□□□□□ -1.2
CLN6-223	ENST00000637823		A0A096LNI7	61 aa		7.54	□□□□□ -1.2
CLN6-223	ENST00000637823		H3BUT2	72 aa		7.54	□□□□□ -1.2
CLN6-223	ENST00000637823		H7C2G1	150 aa		7.54	□□□□□ -1.2
CLN6-223	ENST00000637823		M0R378	163 aa		7.54	□□□□□ -1.2
CLN6-223	ENST00000637823	NCR3	O14931	201 aa		7.54	□□□□□ -1.2
CLN6-223	ENST00000637823	OR13C6P	Q8NH95	151 aa		7.54	□□□□□ -1.2
CLN6-223	ENST00000637823	IGLV5-37	A0A075B6J1	123 aa		7.53	□□□□□ -1.2
CLN6-223	ENST00000637823	IGLV5-52	A0A0A0MRZ9	124 aa		7.53	□□□□□ -1.2
CLN6-223	ENST00000637823		Q1RN00	199 aa		7.53	□□□□□ -1.2
CLN6-223	ENST00000637823	TMEM126A	Q9H061	195 aa		7.53	□□□□□ -1.2
CLN6-223	ENST00000637823	LINC00474	Q9P2X8	69 aa		7.53	□□□□□ -1.2
CLN6-223	ENST00000637823	DNAH17	Q9UFH2	4485 aa		7.52	□□□□□ -1.2
CLN6-223	ENST00000637823	PSMB2	P49721	201 aa		7.52	□□□□□ -1.21
CLN6-223	ENST00000637823	S100A7L2	Q5SY68	101 aa		7.52	□□□□□ -1.21
CLN6-223	ENST00000637823	LINC00336	Q6ZUF6	198 aa		7.52	□□□□□ -1.21
CLN6-223	ENST00000637823	NKAPP1	Q8N9T2	125 aa		7.52	□□□□□ -1.21
CLN6-223	ENST00000637823	NAA38	Q9BRA0	125 aa	Known RBP	7.52	□□□□□ -1.21
CLN6-223	ENST00000637823	IGKV2-24	A0A0C4DH68	120 aa		7.51	□□□□□ -1.21
CLN6-223	ENST00000637823		A0A1W2PPM0	123 aa		7.51	□□□□□ -1.21
CLN6-223	ENST00000637823	LINC01620	Q4KN68	170 aa		7.51	□□□□□ -1.21
CLN6-223	ENST00000637823	SERTAD4-AS1	Q5TG53	156 aa		7.51	□□□□□ -1.21
CLN6-223	ENST00000637823	BIRC6	Q9NR09	4857 aa		7.51	□□□□□ -1.21
CLN6-223	ENST00000637823	HECTD4	Q9Y4D8	3996 aa		7.51	□□□□□ -1.21
CLN6-223	ENST00000637823	HYDIN	Q4G0P3	5121 aa		7.5	□□□□□ -1.21
CLN6-223	ENST00000637823		A0A1B0GV90	55 aa		7.5	□□□□□ -1.21
CLN6-223	ENST00000637823	FAM168B	A1KXE4	195 aa		7.5	□□□□□ -1.21
CLN6-223	ENST00000637823	IGLV6-57	P01721	117 aa		7.5	□□□□□ -1.21
CLN6-223	ENST00000637823	FABP2	P12104	132 aa		7.5	□□□□□ -1.21
CLN6-223	ENST00000637823	RPL28	P46779	137 aa	Known RBP	7.5	□□□□□ -1.21
CLN6-223	ENST00000637823	EPPK1	P58107	5090 aa	Known RBP	7.5	□□□□□ -1.21
CLN6-223	ENST00000637823	SACS	Q9NZJ4	4579 aa		7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	COX6C	P09669	75 aa		7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	SCGB1C2	P0DMR2	95 aa		7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	FUS	P35637	526 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	LYRM7	Q5U5X0	104 aa		7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	KRTAP7-1	Q8IUC3	87 aa		7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	SMIM11B	Q8TCY0	68 aa		7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	CBY1	Q9Y3M2	126 aa		7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	C22orf24	Q9Y442	160 aa		7.49	□□□□□ -1.21
CLN6-223	ENST00000637823	TRBV10-3	A0A0K0K1G6	114 aa		7.48	□□□□□ -1.21
CLN6-223	ENST00000637823	TRIAP1	O43715	76 aa		7.48	□□□□□ -1.21
CLN6-223	ENST00000637823	CHTF8	P0CG12	524 aa		7.48	□□□□□ -1.21
CLN6-223	ENST00000637823	KRTAP10-2	P60368	255 aa		7.48	□□□□□ -1.21
CLN6-223	ENST00000637823	VAMP3	Q15836	100 aa		7.48	□□□□□ -1.21
CLN6-223	ENST00000637823	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	7.48	□□□□□ -1.21
CLN6-223	ENST00000637823	DPH3	Q96FX2	82 aa		7.48	□□□□□ -1.21
CLN6-223	ENST00000637823		A0A1W2PNN7	141 aa		7.47	□□□□□ -1.21
CLN6-223	ENST00000637823	C7orf33	Q8WU49	177 aa		7.47	□□□□□ -1.21
CLN6-223	ENST00000637823	MRPL55	Q7Z7F7	128 aa	Known RBP	7.46	□□□□□ -1.22
CLN6-223	ENST00000637823	SPACA4	Q8TDM5	124 aa		7.46	□□□□□ -1.22
CLN6-223	ENST00000637823	LINC00167	Q96N53	147 aa		7.46	□□□□□ -1.22
CLN6-223	ENST00000637823	TRBV20-1	A0A075B6N2	111 aa		7.45	□□□□□ -1.22
CLN6-223	ENST00000637823	EPM2A	B3EWF7	344 aa		7.45	□□□□□ -1.22
CLN6-223	ENST00000637823	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.45	□□□□□ -1.22
CLN6-223	ENST00000637823	IGLV1-50	A0A075B6I6	118 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823	TRAV23DV6	A0A075B6W5	121 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823	GAGE10	A6NGK3	116 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823		H0YGX0	51 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823	PANO1	I0J062	215 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823		M0QXV9	152 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823	GTF2H5	Q6ZYL4	71 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823	KCNQ1DN	Q9H478	68 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823	SPCS1	Q9Y6A9	102 aa		7.44	□□□□□ -1.22
CLN6-223	ENST00000637823		K7EP34	96 aa		7.43	□□□□□ -1.22
CLN6-223	ENST00000637823		A0A087WYN8	130 aa		7.42	□□□□□ -1.22
CLN6-223	ENST00000637823	TRBV7-6	A0A0J9YX20	115 aa		7.42	□□□□□ -1.22
CLN6-223	ENST00000637823	RPL37AP8	A6NKH3	93 aa		7.42	□□□□□ -1.22

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