RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 LINC01556Q5JQF7 62 aa12.37□□□□□ -0.43
CTSD-212ENST00000637815 Q6Q795 121 aa12.37□□□□□ -0.43
CTSD-212ENST00000637815 OBSCN-AS1Q96MR7 158 aa12.37□□□□□ -0.43
CTSD-212ENST00000637815 A0A1B0GV72 72 aa12.35□□□□□ -0.43
CTSD-212ENST00000637815 GAGE2BQ13066 116 aa12.35□□□□□ -0.43
CTSD-212ENST00000637815 GAGE2EQ4V326 116 aa12.35□□□□□ -0.43
CTSD-212ENST00000637815 GAGE2DQ9UEU5 116 aa12.35□□□□□ -0.43
CTSD-212ENST00000637815 COL6A5A8TX70 2615 aa12.35□□□□□ -0.43
CTSD-212ENST00000637815 TTC32Q5I0X7 151 aa12.35□□□□□ -0.43
CTSD-212ENST00000637815 ORMDL1Q9P0S3 153 aa12.35□□□□□ -0.43
CTSD-212ENST00000637815 S100A7L2Q5SY68 101 aa12.34□□□□□ -0.43
CTSD-212ENST00000637815 SLPIP03973 132 aa12.33□□□□□ -0.43
CTSD-212ENST00000637815 C9orf129Q5T035 196 aaKnown RBP12.33□□□□□ -0.43
CTSD-212ENST00000637815 SDIM1Q6ZPB5 146 aa12.33□□□□□ -0.43
CTSD-212ENST00000637815 Q8N814 137 aa12.33□□□□□ -0.43
CTSD-212ENST00000637815 ZNF561-AS1K7EIQ3 104 aa12.33□□□□□ -0.44
CTSD-212ENST00000637815 C15orf56Q8N910 161 aa12.33□□□□□ -0.44
CTSD-212ENST00000637815 IGLV6-57P01721 117 aa12.32□□□□□ -0.44
CTSD-212ENST00000637815 C6orf99Q4VX62 202 aa12.32□□□□□ -0.44
CTSD-212ENST00000637815 HIGD2BQ4VC39 106 aa12.32□□□□□ -0.44
CTSD-212ENST00000637815 NBEAL1Q6ZS30 2694 aa12.31□□□□□ -0.44
CTSD-212ENST00000637815 CAMK2N2Q96S95 79 aa12.31□□□□□ -0.44
CTSD-212ENST00000637815 C2orf48Q96LS8 159 aa12.3□□□□□ -0.44
CTSD-212ENST00000637815 C1orf43Q9BWL3 253 aa12.3□□□□□ -0.44
CTSD-212ENST00000637815 SMCR5Q8TEV8 140 aa12.3□□□□□ -0.44
CTSD-212ENST00000637815 RPL18AQ02543 176 aaKnown RBP12.29□□□□□ -0.44
CTSD-212ENST00000637815 TM2D3Q9BRN9 247 aa12.29□□□□□ -0.44
CTSD-212ENST00000637815 TRBV7-7A0A0K0K1E9 115 aa12.28□□□□□ -0.44
CTSD-212ENST00000637815 DNAH10OSP0CZ25 163 aa12.28□□□□□ -0.44
CTSD-212ENST00000637815 HUWE1Q7Z6Z7 4374 aaKnown RBP12.28□□□□□ -0.44
CTSD-212ENST00000637815 TRAV10A0A0B4J240 114 aa12.28□□□□□ -0.44
CTSD-212ENST00000637815 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
CTSD-212ENST00000637815 XAGE1AQ9HD64 81 aa12.28□□□□□ -0.44
CTSD-212ENST00000637815 C14orf132Q9NPU4 83 aa12.28□□□□□ -0.44
CTSD-212ENST00000637815 LINC00575Q6W349 94 aa12.27□□□□□ -0.44
CTSD-212ENST00000637815 Q6ZRU5 148 aa12.27□□□□□ -0.44
CTSD-212ENST00000637815 LINC00643Q86TS7 51 aa12.27□□□□□ -0.45
CTSD-212ENST00000637815 F8WDY8 70 aa12.26□□□□□ -0.45
CTSD-212ENST00000637815 TMEM256-PLSCR3K7ERE1 68 aa12.25□□□□□ -0.45
CTSD-212ENST00000637815 PRB2P02812 416 aaPredicted RBP12.25□□□□□ -0.45
CTSD-212ENST00000637815 IGKV2D-24A0A075B6R9 120 aa12.25□□□□□ -0.45
CTSD-212ENST00000637815 K7EIL1 84 aa12.24□□□□□ -0.45
CTSD-212ENST00000637815 TRBV10-3A0A0K0K1G6 114 aa12.23□□□□□ -0.45
CTSD-212ENST00000637815 NDUFC2-KCTD14E9PQ53 114 aa12.23□□□□□ -0.45
CTSD-212ENST00000637815 NDUFV3P56181 108 aaKnown RBP12.23□□□□□ -0.45
CTSD-212ENST00000637815 VPREB1P12018 145 aa12.23□□□□□ -0.45
CTSD-212ENST00000637815 ANAPC13Q9BS18 74 aa12.23□□□□□ -0.45
CTSD-212ENST00000637815 IMUPQ9GZP8 106 aa12.23□□□□□ -0.45
CTSD-212ENST00000637815 TRAV23DV6A0A075B6W5 121 aa12.21□□□□□ -0.45
CTSD-212ENST00000637815 JMJD7-PLA2G4BH0Y9G9 81 aa12.21□□□□□ -0.45
CTSD-212ENST00000637815 hADV29S1A0JD25 119 aa12.21□□□□□ -0.46
CTSD-212ENST00000637815 DNAH1Q9P2D7 4330 aa12.2□□□□□ -0.46
CTSD-212ENST00000637815 LINC00588Q9Y4M8 146 aa12.2□□□□□ -0.46
CTSD-212ENST00000637815 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
CTSD-212ENST00000637815 DIRC1Q969H9 104 aa12.19□□□□□ -0.46
CTSD-212ENST00000637815 SYCNQ0VAF6 134 aa12.18□□□□□ -0.46
CTSD-212ENST00000637815 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
CTSD-212ENST00000637815 M0R378 163 aa12.17□□□□□ -0.46
CTSD-212ENST00000637815 ZNF73O43830 326 aaPredicted RBP12.16□□□□□ -0.46
CTSD-212ENST00000637815 CCKP06307 115 aa12.16□□□□□ -0.46
CTSD-212ENST00000637815 Q6ZRP5 223 aa12.16□□□□□ -0.46
CTSD-212ENST00000637815 TRBV7-6A0A0J9YX20 115 aa12.16□□□□□ -0.46
CTSD-212ENST00000637815 LINC00846Q9NV44 126 aa12.15□□□□□ -0.46
CTSD-212ENST00000637815 ELOF1P60002 83 aaKnown RBP12.13□□□□□ -0.47
CTSD-212ENST00000637815 H3BQ85 93 aa12.13□□□□□ -0.47
CTSD-212ENST00000637815 MGAM2Q2M2H8 2515 aa12.13□□□□□ -0.47
CTSD-212ENST00000637815 COX7BP24311 80 aa12.12□□□□□ -0.47
CTSD-212ENST00000637815 Q6ZQY7 126 aa12.11□□□□□ -0.47
CTSD-212ENST00000637815 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
CTSD-212ENST00000637815 TLX1NBP0CAT3 122 aa12.1□□□□□ -0.47
CTSD-212ENST00000637815 Q6JHZ5 121 aa12.09□□□□□ -0.47
CTSD-212ENST00000637815 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.09□□□□□ -0.47
CTSD-212ENST00000637815 USP17L23D6RBM5 183 aa12.08□□□□□ -0.48
CTSD-212ENST00000637815 RMI2Q96E14 147 aa12.08□□□□□ -0.48
CTSD-212ENST00000637815 FAM236AA0A1B0GUQ0 79 aa12.08□□□□□ -0.48
CTSD-212ENST00000637815 FAM236BA0A1B0GV22 79 aa12.08□□□□□ -0.48
CTSD-212ENST00000637815 RBM3P98179 157 aaKnown RBP12.07□□□□□ -0.48
CTSD-212ENST00000637815 CASC10Q5T4H9 136 aa12.07□□□□□ -0.48
CTSD-212ENST00000637815 COL7A1Q02388 2944 aa12.07□□□□□ -0.48
CTSD-212ENST00000637815 LOC110117498A0A087WWA1 95 aa12.06□□□□□ -0.48
CTSD-212ENST00000637815 LAMTOR3Q9UHA4 124 aa12.06□□□□□ -0.48
CTSD-212ENST00000637815 DNAH9Q9NYC9 4486 aa12.06□□□□□ -0.48
CTSD-212ENST00000637815 Q6ZQT0 140 aa12.05□□□□□ -0.48
CTSD-212ENST00000637815 LINC00528Q8N1L1 170 aa12.05□□□□□ -0.48
CTSD-212ENST00000637815 PLA2G2DQ9UNK4 145 aa12.05□□□□□ -0.48
CTSD-212ENST00000637815 GHRHP01286 108 aa12.04□□□□□ -0.48
CTSD-212ENST00000637815 SERTAD4-AS1Q5TG53 156 aa12.04□□□□□ -0.48
CTSD-212ENST00000637815 STAB2Q8WWQ8 2551 aa12.03□□□□□ -0.48
CTSD-212ENST00000637815 NKAPP1Q8N9T2 125 aa12.03□□□□□ -0.48
CTSD-212ENST00000637815 KCNQ1DNQ9H478 68 aa12.03□□□□□ -0.48
CTSD-212ENST00000637815 IGKV3D-7A0A0C4DH55 119 aa12.01□□□□□ -0.49
CTSD-212ENST00000637815 C7orf33Q8WU49 177 aa12.01□□□□□ -0.49
CTSD-212ENST00000637815 CCDC179H3BU77 68 aa12□□□□□ -0.49
CTSD-212ENST00000637815 HIST1H4AP62805 103 aaKnown RBP12□□□□□ -0.49
CTSD-212ENST00000637815 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
CTSD-212ENST00000637815 PDE6GP18545 87 aa11.99□□□□□ -0.49
CTSD-212ENST00000637815 DSCR8Q96T75 97 aa11.99□□□□□ -0.49
CTSD-212ENST00000637815 DYNC2H1Q8NCM8 4307 aaKnown RBP11.99□□□□□ -0.49
CTSD-212ENST00000637815 ATP5EP2Q5VTU8 51 aa11.98□□□□□ -0.49
CTSD-212ENST00000637815 LYSTQ99698 3801 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms