RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	FHL3	Q13643	280 aa		11.51	□□□□□ -0.57
CACNA1A-238	ENST00000637276	ACAN	P16112	2415 aa		11.51	□□□□□ -0.57
CACNA1A-238	ENST00000637276	YPEL4	Q96NS1	127 aa		11.51	□□□□□ -0.57
CACNA1A-238	ENST00000637276	ZNF575	Q86XF7	245 aa		11.49	□□□□□ -0.57
CACNA1A-238	ENST00000637276	C4orf26	Q17RF5	130 aa		11.49	□□□□□ -0.57
CACNA1A-238	ENST00000637276	CDIP1	Q9H305	208 aa		11.48	□□□□□ -0.57
CACNA1A-238	ENST00000637276		Q8N6K4	173 aa		11.48	□□□□□ -0.57
CACNA1A-238	ENST00000637276	ST20-AS1	Q8NBB2	130 aa		11.47	□□□□□ -0.57
CACNA1A-238	ENST00000637276	GOLGB1	Q14789	3259 aa	Known RBP	11.45	□□□□□ -0.58
CACNA1A-238	ENST00000637276	LINC00846	Q9NV44	126 aa		11.44	□□□□□ -0.58
CACNA1A-238	ENST00000637276	URB1-AS1	Q96HZ7	61 aa		11.44	□□□□□ -0.58
CACNA1A-238	ENST00000637276	ZNF462	Q96JM2	2506 aa		11.44	□□□□□ -0.58
CACNA1A-238	ENST00000637276		M0R2T5	61 aa		11.43	□□□□□ -0.58
CACNA1A-238	ENST00000637276	LINC00167	Q96N53	147 aa		11.43	□□□□□ -0.58
CACNA1A-238	ENST00000637276	LTBP2	Q14767	1821 aa		11.43	□□□□□ -0.58
CACNA1A-238	ENST00000637276	FAM168B	A1KXE4	195 aa		11.42	□□□□□ -0.58
CACNA1A-238	ENST00000637276	LINC00315	P59091	139 aa		11.42	□□□□□ -0.58
CACNA1A-238	ENST00000637276	DSCR10	P59022	87 aa		11.42	□□□□□ -0.58
CACNA1A-238	ENST00000637276	CRIPT	Q9P021	101 aa		11.41	□□□□□ -0.58
CACNA1A-238	ENST00000637276	MUC7	Q8TAX7	377 aa		11.39	□□□□□ -0.59
CACNA1A-238	ENST00000637276	SPATA3	Q8NHX4	192 aa		11.39	□□□□□ -0.59
CACNA1A-238	ENST00000637276	IGLV1-51	P01701	117 aa		11.38	□□□□□ -0.59
CACNA1A-238	ENST00000637276	OBSCN-AS1	Q96MR7	158 aa		11.38	□□□□□ -0.59
CACNA1A-238	ENST00000637276	PKD1L2	Q7Z442	2459 aa		11.38	□□□□□ -0.59
CACNA1A-238	ENST00000637276	EPM2A	B3EWF7	344 aa		11.37	□□□□□ -0.59
CACNA1A-238	ENST00000637276		K7EQZ3	153 aa		11.37	□□□□□ -0.59
CACNA1A-238	ENST00000637276	CSNK1G2-AS1	Q8NCQ2	148 aa		11.37	□□□□□ -0.59
CACNA1A-238	ENST00000637276	ANAPC11	Q9NYG5	84 aa		11.36	□□□□□ -0.59
CACNA1A-238	ENST00000637276	C8orf87	E5RJ46	101 aa		11.36	□□□□□ -0.59
CACNA1A-238	ENST00000637276	LINC01600	Q96MT4	127 aa		11.36	□□□□□ -0.59
CACNA1A-238	ENST00000637276	LINC00310	P59036	64 aa		11.36	□□□□□ -0.59
CACNA1A-238	ENST00000637276	VPREB1	P12018	145 aa		11.34	□□□□□ -0.59
CACNA1A-238	ENST00000637276		A0A0G2JQZ4	141 aa		11.34	□□□□□ -0.59
CACNA1A-238	ENST00000637276		A0A1W2PNN7	141 aa		11.34	□□□□□ -0.59
CACNA1A-238	ENST00000637276	IGLV5-37	A0A075B6J1	123 aa		11.33	□□□□□ -0.6
CACNA1A-238	ENST00000637276	LINC00476	Q8WZB0	136 aa		11.33	□□□□□ -0.6
CACNA1A-238	ENST00000637276	NHLRC4	P0CG21	123 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1A-238	ENST00000637276		A0A1W2PPR1	153 aa		11.31	□□□□□ -0.6
CACNA1A-238	ENST00000637276	WIPF1	O43516	503 aa		11.31	□□□□□ -0.6
CACNA1A-238	ENST00000637276	USP9X	Q93008	2570 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNA1A-238	ENST00000637276	DNAH10OS	P0CZ25	163 aa		11.29	□□□□□ -0.6
CACNA1A-238	ENST00000637276	PIEZO1	Q92508	2521 aa		11.29	□□□□□ -0.6
CACNA1A-238	ENST00000637276	AMELX	Q99217	191 aa		11.28	□□□□□ -0.6
CACNA1A-238	ENST00000637276		Q6ZRP5	223 aa		11.27	□□□□□ -0.6
CACNA1A-238	ENST00000637276	IGLV5-39	A0A0G2JS06	123 aa		11.26	□□□□□ -0.61
CACNA1A-238	ENST00000637276	CNFN	Q9BYD5	112 aa		11.26	□□□□□ -0.61
CACNA1A-238	ENST00000637276		Q8N2B8	174 aa		11.25	□□□□□ -0.61
CACNA1A-238	ENST00000637276	TRAV22	A0A0B4J277	110 aa		11.23	□□□□□ -0.61
CACNA1A-238	ENST00000637276	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1A-238	ENST00000637276	IGLV5-45	A0A087WSX0	123 aa		11.21	□□□□□ -0.61
CACNA1A-238	ENST00000637276	TM2D3	Q9BRN9	247 aa		11.21	□□□□□ -0.61
CACNA1A-238	ENST00000637276		A0A096LNJ9	63 aa		11.21	□□□□□ -0.62
CACNA1A-238	ENST00000637276	IGLV5-48	A0A075B6I7	105 aa		11.21	□□□□□ -0.62
CACNA1A-238	ENST00000637276		Q8N1X5	172 aa		11.21	□□□□□ -0.62
CACNA1A-238	ENST00000637276		Q8NBF4	154 aa		11.2	□□□□□ -0.62
CACNA1A-238	ENST00000637276	SPTBN4	Q9H254	2564 aa		11.2	□□□□□ -0.62
CACNA1A-238	ENST00000637276	FAM218A	Q96MZ4	157 aa		11.19	□□□□□ -0.62
CACNA1A-238	ENST00000637276	NBDY	A0A0U1RRE5	68 aa		11.19	□□□□□ -0.62
CACNA1A-238	ENST00000637276		Q6ZQT0	140 aa		11.18	□□□□□ -0.62
CACNA1A-238	ENST00000637276	CXCL6	P80162	114 aa		11.18	□□□□□ -0.62
CACNA1A-238	ENST00000637276	KRTAP24-1	Q3LI83	254 aa		11.18	□□□□□ -0.62
CACNA1A-238	ENST00000637276	POLQ	O75417	2590 aa		11.18	□□□□□ -0.62
CACNA1A-238	ENST00000637276	C16orf95	Q9H693	158 aa		11.17	□□□□□ -0.62
CACNA1A-238	ENST00000637276	LINC00588	Q9Y4M8	146 aa		11.16	□□□□□ -0.62
CACNA1A-238	ENST00000637276		A0A1B0GUV1	79 aa		11.16	□□□□□ -0.62
CACNA1A-238	ENST00000637276	IGLV1-50	A0A075B6I6	118 aa		11.16	□□□□□ -0.62
CACNA1A-238	ENST00000637276	RBM12B-AS1	Q9P1G2	102 aa		11.15	□□□□□ -0.62
CACNA1A-238	ENST00000637276	KIF25-AS1	Q9Y6Z4	181 aa		11.14	□□□□□ -0.63
CACNA1A-238	ENST00000637276	TP53AIP1	Q9HCN2	124 aa		11.14	□□□□□ -0.63
CACNA1A-238	ENST00000637276		A8MUN3	132 aa		11.13	□□□□□ -0.63
CACNA1A-238	ENST00000637276	COA5	Q86WW8	74 aa		11.13	□□□□□ -0.63
CACNA1A-238	ENST00000637276	LINC00304	Q8N9R0	145 aa		11.13	□□□□□ -0.63
CACNA1A-238	ENST00000637276	MUC22	E2RYF6	1773 aa	Predicted RBP	11.12	□□□□□ -0.63
CACNA1A-238	ENST00000637276	LUZP6	Q538Z0	58 aa		11.11	□□□□□ -0.63
CACNA1A-238	ENST00000637276	MTOR	P42345	2549 aa		11.11	□□□□□ -0.63
CACNA1A-238	ENST00000637276	USP9Y	O00507	2555 aa	Predicted RBP	11.11	□□□□□ -0.63
CACNA1A-238	ENST00000637276	MIR22HG	Q0VDD5	57 aa		11.11	□□□□□ -0.63
CACNA1A-238	ENST00000637276	PLA2G2D	Q9UNK4	145 aa		11.1	□□□□□ -0.63
CACNA1A-238	ENST00000637276	EP400	Q96L91	3159 aa		11.09	□□□□□ -0.63
CACNA1A-238	ENST00000637276	WWC2-AS2	Q96NR7	200 aa		11.09	□□□□□ -0.63
CACNA1A-238	ENST00000637276	BPTF	Q12830	3046 aa		11.09	□□□□□ -0.63
CACNA1A-238	ENST00000637276	TRBV7-4	A0A0J9YYF1	115 aa		11.08	□□□□□ -0.64
CACNA1A-238	ENST00000637276	BCE1	O60756	84 aa		11.07	□□□□□ -0.64
CACNA1A-238	ENST00000637276	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.07	□□□□□ -0.64
CACNA1A-238	ENST00000637276	CAMK2N1	Q7Z7J9	78 aa		11.06	□□□□□ -0.64
CACNA1A-238	ENST00000637276	USP24	Q9UPU5	2620 aa		11.06	□□□□□ -0.64
CACNA1A-238	ENST00000637276	PRO3102	Q9H379	93 aa		11.06	□□□□□ -0.64
CACNA1A-238	ENST00000637276	C11orf72	Q8NBR9	251 aa		11.05	□□□□□ -0.64
CACNA1A-238	ENST00000637276	CHD8	Q9HCK8	2581 aa		11.04	□□□□□ -0.64
CACNA1A-238	ENST00000637276		Q6ZRX8	168 aa		11.04	□□□□□ -0.64
CACNA1A-238	ENST00000637276	C15orf56	Q8N910	161 aa		11.04	□□□□□ -0.64
CACNA1A-238	ENST00000637276	PRO0628	Q9UI54	55 aa		11.03	□□□□□ -0.64
CACNA1A-238	ENST00000637276	ANKRD17	O75179	2603 aa	Known RBP	11.03	□□□□□ -0.64
CACNA1A-238	ENST00000637276	SMCP	P49901	116 aa	Predicted RBP	11.02	□□□□□ -0.64
CACNA1A-238	ENST00000637276	MRPL34	Q9BQ48	92 aa	Known RBP	11.02	□□□□□ -0.64
CACNA1A-238	ENST00000637276		F8WDY8	70 aa		11.02	□□□□□ -0.65
CACNA1A-238	ENST00000637276	ELOF1	P60002	83 aa	Known RBP	11.02	□□□□□ -0.65
CACNA1A-238	ENST00000637276	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.01	□□□□□ -0.65
CACNA1A-238	ENST00000637276	FASN	P49327	2511 aa	Known RBP	11	□□□□□ -0.65
CACNA1A-238	ENST00000637276	UQCR11	O14957	56 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms