RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 ARL17AQ8IVW1 177 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 LINC00526Q96FQ7 95 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 A0A096LNI7 61 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 LOC105371267A0A1B0GV96 52 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 EPM2AB3EWF7 344 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 IFITM1P13164 125 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 SPATA45Q537H7 98 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 SCGB1D4Q6XE38 83 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 Q6ZRP5 223 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 MIEN1Q9BRT3 115 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 SPANXDQ9BXN6 97 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 SPANXB1Q9NS25 103 aaPredicted RBP4.29□□□□□ -1.72
UPF3B-205ENST00000636792 SPANXCQ9NY87 97 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 TP73-AS1Q9UF72 201 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 DNAH10Q8IVF4 4471 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 HECTD4Q9Y4D8 3996 aa4.29□□□□□ -1.72
UPF3B-205ENST00000636792 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
UPF3B-205ENST00000636792 NDUFC2O95298 119 aa4.28□□□□□ -1.72
UPF3B-205ENST00000636792 LINC00158P58513 81 aa4.28□□□□□ -1.72
UPF3B-205ENST00000636792 RPL24P83731 157 aaKnown RBP4.28□□□□□ -1.72
UPF3B-205ENST00000636792 SLC25A34Q6PIV7 304 aa4.28□□□□□ -1.72
UPF3B-205ENST00000636792 HIGD1BQ9P298 99 aa4.28□□□□□ -1.72
UPF3B-205ENST00000636792 PAM16Q9Y3D7 125 aa4.28□□□□□ -1.72
UPF3B-205ENST00000636792 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
UPF3B-205ENST00000636792 PFN2P35080 140 aa4.27□□□□□ -1.73
UPF3B-205ENST00000636792 MAJINQ3KP22 176 aa4.27□□□□□ -1.73
UPF3B-205ENST00000636792 MIR7-3HGQ8N6C7 128 aa4.27□□□□□ -1.73
UPF3B-205ENST00000636792 LITAFQ99732 161 aa4.27□□□□□ -1.73
UPF3B-205ENST00000636792 SND1-IT1Q9HBX3 110 aa4.27□□□□□ -1.73
UPF3B-205ENST00000636792 CBY1Q9Y3M2 126 aa4.27□□□□□ -1.73
UPF3B-205ENST00000636792 IGKV2-24A0A0C4DH68 120 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 TRBV10-2A0A0K0K1G8 114 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 SMIM13P0DJ93 91 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 TAL2Q16559 108 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 C9orf116Q5BN46 136 aaPredicted RBP4.26□□□□□ -1.73
UPF3B-205ENST00000636792 PCP2Q8IVA1 136 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 UQCR10Q9UDW1 63 aa4.26□□□□□ -1.73
UPF3B-205ENST00000636792 A0A087WYN8 130 aa4.25□□□□□ -1.73
UPF3B-205ENST00000636792 GAGE2EQ4V326 116 aa4.25□□□□□ -1.73
UPF3B-205ENST00000636792 LBHQ53QV2 105 aaPredicted RBP4.25□□□□□ -1.73
UPF3B-205ENST00000636792 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
UPF3B-205ENST00000636792 SCXQ7RTU7 201 aa4.25□□□□□ -1.73
UPF3B-205ENST00000636792 LINC00518Q8N0U6 118 aa4.25□□□□□ -1.73
UPF3B-205ENST00000636792 NKAPP1Q8N9T2 125 aa4.25□□□□□ -1.73
UPF3B-205ENST00000636792 TTTY13Q9BZ97 58 aa4.25□□□□□ -1.73
UPF3B-205ENST00000636792 GAGE2DQ9UEU5 116 aa4.25□□□□□ -1.73
UPF3B-205ENST00000636792 PKD1P98161 4303 aa4.25□□□□□ -1.73
UPF3B-205ENST00000636792 TSTD3H0UI37 97 aa4.24□□□□□ -1.73
UPF3B-205ENST00000636792 M0QXV9 152 aa4.24□□□□□ -1.73
UPF3B-205ENST00000636792 VPREB1P12018 145 aa4.24□□□□□ -1.73
UPF3B-205ENST00000636792 LINC01620Q4KN68 170 aa4.24□□□□□ -1.73
UPF3B-205ENST00000636792 LINC00308Q8TCZ7 52 aa4.24□□□□□ -1.73
UPF3B-205ENST00000636792 C7orf33Q8WU49 177 aa4.24□□□□□ -1.73
UPF3B-205ENST00000636792 PKHD1P08F94 4074 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 M0R378 163 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 CHTF8P0CG12 524 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
UPF3B-205ENST00000636792 ADAMTSL4-AS1Q5T5F5 129 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 MRPL55Q7Z7F7 128 aaKnown RBP4.23□□□□□ -1.73
UPF3B-205ENST00000636792 CIRBP-AS1Q8TBR5 109 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 C14orf144Q96I85 54 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 C12orf57Q99622 126 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 CDIP1Q9H305 208 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
UPF3B-205ENST00000636792 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 DNAH5Q8TE73 4624 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 A0A0U1RRA0 63 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 PANO1I0J062 215 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 FUSP35637 526 aaKnown RBP eCLIP4.22□□□□□ -1.73
UPF3B-205ENST00000636792 XGP55808 180 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 HSD52Q0P140 79 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 C2orf91Q6ZV80 131 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 FAM19A5Q7Z5A7 132 aaPredicted RBP4.22□□□□□ -1.73
UPF3B-205ENST00000636792 DPH3Q96FX2 82 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 HIST1H4GQ99525 98 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 FAM30AQ9NZY2 134 aa4.22□□□□□ -1.73
UPF3B-205ENST00000636792 A0A1W2PNN7 141 aa4.21□□□□□ -1.74
UPF3B-205ENST00000636792 HNRNPA3P51991 378 aaKnown RBP4.21□□□□□ -1.74
UPF3B-205ENST00000636792 SERTAD4-AS1Q5TG53 156 aa4.21□□□□□ -1.74
UPF3B-205ENST00000636792 SOSTDC1Q6X4U4 206 aa4.21□□□□□ -1.74
UPF3B-205ENST00000636792 DAND5Q8N907 189 aa4.21□□□□□ -1.74
UPF3B-205ENST00000636792 TMEM126AQ9H061 195 aa4.21□□□□□ -1.74
UPF3B-205ENST00000636792 C22orf24Q9Y442 160 aa4.21□□□□□ -1.74
UPF3B-205ENST00000636792 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.74
UPF3B-205ENST00000636792 TRAV13-2A0A0B4J235 113 aa4.2□□□□□ -1.74
UPF3B-205ENST00000636792 PRYO14603 147 aa4.2□□□□□ -1.74
UPF3B-205ENST00000636792 UBE2BP63146 152 aa4.2□□□□□ -1.74
UPF3B-205ENST00000636792 IGLV1-50A0A075B6I6 118 aa4.19□□□□□ -1.74
UPF3B-205ENST00000636792 A0A0B4J2C4 111 aa4.19□□□□□ -1.74
UPF3B-205ENST00000636792 FAM168BA1KXE4 195 aa4.19□□□□□ -1.74
UPF3B-205ENST00000636792 M0R143 59 aa4.19□□□□□ -1.74
UPF3B-205ENST00000636792 IGLV6-57P01721 117 aa4.19□□□□□ -1.74
UPF3B-205ENST00000636792 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
UPF3B-205ENST00000636792 MUSTN1Q8IVN3 82 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms