RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 SMIM29Q86T20 159 aa11.27□□□□□ -0.61
CACNA1A-221ENST00000636012 SMCR5Q8TEV8 140 aa11.27□□□□□ -0.61
CACNA1A-221ENST00000636012 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
CACNA1A-221ENST00000636012 Q96NJ1 140 aa11.26□□□□□ -0.61
CACNA1A-221ENST00000636012 YPEL4Q96NS1 127 aa11.26□□□□□ -0.61
CACNA1A-221ENST00000636012 FAM229AH3BQW9 127 aa11.25□□□□□ -0.61
CACNA1A-221ENST00000636012 CR1P17927 2039 aa11.24□□□□□ -0.61
CACNA1A-221ENST00000636012 F8WDY8 70 aa11.24□□□□□ -0.61
CACNA1A-221ENST00000636012 A0A1B0GUV1 79 aa11.24□□□□□ -0.61
CACNA1A-221ENST00000636012 CRIPTQ9P021 101 aa11.23□□□□□ -0.61
CACNA1A-221ENST00000636012 LINC00313P59037 77 aa11.23□□□□□ -0.61
CACNA1A-221ENST00000636012 C9orf129Q5T035 196 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-221ENST00000636012 TYMSOSQ8TAI1 123 aa11.22□□□□□ -0.61
CACNA1A-221ENST00000636012 C4orf26Q17RF5 130 aa11.21□□□□□ -0.62
CACNA1A-221ENST00000636012 A0A1W2PPR1 153 aa11.2□□□□□ -0.62
CACNA1A-221ENST00000636012 AMELXQ99217 191 aa11.2□□□□□ -0.62
CACNA1A-221ENST00000636012 KIAA0087Q14695 138 aa11.2□□□□□ -0.62
CACNA1A-221ENST00000636012 C16orf90A8MZG2 172 aa11.18□□□□□ -0.62
CACNA1A-221ENST00000636012 NCOR2Q9Y618 2525 aa11.17□□□□□ -0.62
CACNA1A-221ENST00000636012 SETD2Q9BYW2 2564 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-221ENST00000636012 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-221ENST00000636012 IGLV6-57P01721 117 aa11.16□□□□□ -0.62
CACNA1A-221ENST00000636012 A0A0D9SG42 100 aa11.16□□□□□ -0.62
CACNA1A-221ENST00000636012 Q8N2B8 174 aa11.16□□□□□ -0.62
CACNA1A-221ENST00000636012 FAM19A4Q96LR4 140 aa11.14□□□□□ -0.63
CACNA1A-221ENST00000636012 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
CACNA1A-221ENST00000636012 PHF5AQ7RTV0 110 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-221ENST00000636012 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
CACNA1A-221ENST00000636012 CXCL6P80162 114 aa11.1□□□□□ -0.63
CACNA1A-221ENST00000636012 LINC01561Q8N1V8 128 aa11.1□□□□□ -0.63
CACNA1A-221ENST00000636012 LINC00846Q9NV44 126 aa11.09□□□□□ -0.63
CACNA1A-221ENST00000636012 LINC01600Q96MT4 127 aa11.09□□□□□ -0.63
CACNA1A-221ENST00000636012 LINC00167Q96N53 147 aa11.09□□□□□ -0.63
CACNA1A-221ENST00000636012 RTL8CO15255 209 aa11.08□□□□□ -0.63
CACNA1A-221ENST00000636012 BPTFQ12830 3046 aa11.08□□□□□ -0.64
CACNA1A-221ENST00000636012 LUZP6Q538Z0 58 aa11.06□□□□□ -0.64
CACNA1A-221ENST00000636012 ZNF462Q96JM2 2506 aa11.06□□□□□ -0.64
CACNA1A-221ENST00000636012 DNAH12Q6ZR08 3092 aa11.05□□□□□ -0.64
CACNA1A-221ENST00000636012 UTRNP46939 3433 aa11.05□□□□□ -0.64
CACNA1A-221ENST00000636012 LINC00315P59091 139 aa11.04□□□□□ -0.64
CACNA1A-221ENST00000636012 ZNF575Q86XF7 245 aa11.04□□□□□ -0.64
CACNA1A-221ENST00000636012 ANKRD11Q6UB99 2663 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-221ENST00000636012 CSNK1G2-AS1Q8NCQ2 148 aa11.03□□□□□ -0.64
CACNA1A-221ENST00000636012 USP9XQ93008 2570 aaPredicted RBP11.02□□□□□ -0.64
CACNA1A-221ENST00000636012 SPATA3Q8NHX4 192 aa11.02□□□□□ -0.65
CACNA1A-221ENST00000636012 SPTBN4Q9H254 2564 aa11.02□□□□□ -0.65
CACNA1A-221ENST00000636012 PKD1L2Q7Z442 2459 aa11.02□□□□□ -0.65
CACNA1A-221ENST00000636012 LINC00310P59036 64 aa11.02□□□□□ -0.65
CACNA1A-221ENST00000636012 WIPF1O43516 503 aa11.01□□□□□ -0.65
CACNA1A-221ENST00000636012 KIF25-AS1Q9Y6Z4 181 aa11.01□□□□□ -0.65
CACNA1A-221ENST00000636012 TP53AIP1Q9HCN2 124 aa11□□□□□ -0.65
CACNA1A-221ENST00000636012 Q6ZRP5 223 aa11□□□□□ -0.65
CACNA1A-221ENST00000636012 C11orf72Q8NBR9 251 aa11□□□□□ -0.65
CACNA1A-221ENST00000636012 EPM2AB3EWF7 344 aa10.99□□□□□ -0.65
CACNA1A-221ENST00000636012 COL4A2P08572 1712 aa10.99□□□□□ -0.65
CACNA1A-221ENST00000636012 CDIP1Q9H305 208 aa10.98□□□□□ -0.65
CACNA1A-221ENST00000636012 TRAV22A0A0B4J277 110 aa10.98□□□□□ -0.65
CACNA1A-221ENST00000636012 PRO0628Q9UI54 55 aa10.96□□□□□ -0.65
CACNA1A-221ENST00000636012 COX8CQ7Z4L0 72 aa10.96□□□□□ -0.65
CACNA1A-221ENST00000636012 LINC00476Q8WZB0 136 aa10.96□□□□□ -0.65
CACNA1A-221ENST00000636012 NBDYA0A0U1RRE5 68 aa10.96□□□□□ -0.66
CACNA1A-221ENST00000636012 A0A096LNJ9 63 aa10.95□□□□□ -0.66
CACNA1A-221ENST00000636012 KRTAP24-1Q3LI83 254 aa10.95□□□□□ -0.66
CACNA1A-221ENST00000636012 PLA2G2DQ9UNK4 145 aa10.95□□□□□ -0.66
CACNA1A-221ENST00000636012 IGHV3OR16-9A0A0B4J2B5 98 aa10.93□□□□□ -0.66
CACNA1A-221ENST00000636012 K7EQZ3 153 aa10.93□□□□□ -0.66
CACNA1A-221ENST00000636012 Q8NBF4 154 aa10.92□□□□□ -0.66
CACNA1A-221ENST00000636012 LINC00588Q9Y4M8 146 aa10.92□□□□□ -0.66
CACNA1A-221ENST00000636012 ST20-AS1Q8NBB2 130 aa10.91□□□□□ -0.66
CACNA1A-221ENST00000636012 IGLV5-37A0A075B6J1 123 aa10.9□□□□□ -0.66
CACNA1A-221ENST00000636012 M0R2T5 61 aa10.89□□□□□ -0.67
CACNA1A-221ENST00000636012 FAM168BA1KXE4 195 aa10.88□□□□□ -0.67
CACNA1A-221ENST00000636012 ELOF1P60002 83 aaKnown RBP10.88□□□□□ -0.67
CACNA1A-221ENST00000636012 MIR22HGQ0VDD5 57 aa10.88□□□□□ -0.67
CACNA1A-221ENST00000636012 OBSCN-AS1Q96MR7 158 aa10.88□□□□□ -0.67
CACNA1A-221ENST00000636012 WWC2-AS2Q96NR7 200 aa10.87□□□□□ -0.67
CACNA1A-221ENST00000636012 Q6ZRX8 168 aa10.87□□□□□ -0.67
CACNA1A-221ENST00000636012 Q6ZQT0 140 aa10.87□□□□□ -0.67
CACNA1A-221ENST00000636012 IGLV5-39A0A0G2JS06 123 aa10.87□□□□□ -0.67
CACNA1A-221ENST00000636012 BCE1O60756 84 aa10.86□□□□□ -0.67
CACNA1A-221ENST00000636012 SMR3BP02814 79 aaPredicted RBP10.86□□□□□ -0.67
CACNA1A-221ENST00000636012 DSCR10P59022 87 aa10.86□□□□□ -0.67
CACNA1A-221ENST00000636012 H3BNG1 76 aa10.86□□□□□ -0.67
CACNA1A-221ENST00000636012 POLQO75417 2590 aa10.85□□□□□ -0.67
CACNA1A-221ENST00000636012 C5orf42Q9H799 3197 aa10.85□□□□□ -0.67
CACNA1A-221ENST00000636012 FAM218AQ96MZ4 157 aa10.84□□□□□ -0.67
CACNA1A-221ENST00000636012 TM2D3Q9BRN9 247 aa10.84□□□□□ -0.67
CACNA1A-221ENST00000636012 IGLV5-48A0A075B6I7 105 aa10.83□□□□□ -0.68
CACNA1A-221ENST00000636012 UQCR11O14957 56 aa10.83□□□□□ -0.68
CACNA1A-221ENST00000636012 COA5Q86WW8 74 aa10.81□□□□□ -0.68
CACNA1A-221ENST00000636012 Q8NAQ8 132 aa10.81□□□□□ -0.68
CACNA1A-221ENST00000636012 USP9YO00507 2555 aaPredicted RBP10.81□□□□□ -0.68
CACNA1A-221ENST00000636012 A8MUN3 132 aa10.81□□□□□ -0.68
CACNA1A-221ENST00000636012 IGLV5-45A0A087WSX0 123 aa10.81□□□□□ -0.68
CACNA1A-221ENST00000636012 PRRC2CQ9Y520 2896 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-221ENST00000636012 MTORP42345 2549 aa10.8□□□□□ -0.68
CACNA1A-221ENST00000636012 RBM12B-AS1Q9P1G2 102 aa10.79□□□□□ -0.68
CACNA1A-221ENST00000636012 USP24Q9UPU5 2620 aa10.78□□□□□ -0.68
CACNA1A-221ENST00000636012 LINC01546A6NGU7 62 aa10.76□□□□□ -0.69
CACNA1A-221ENST00000636012 GVQW2A0A096LPI5 108 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms