RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 A0A1B0GX51 115 aa3.69□□□□□ -1.82
NEK3-211ENST00000629912 BAALC-AS2P0C853 105 aa3.69□□□□□ -1.82
NEK3-211ENST00000629912 NHLRC4P0CG21 123 aaPredicted RBP3.69□□□□□ -1.82
NEK3-211ENST00000629912 OR13C6PQ8NH95 151 aa3.69□□□□□ -1.82
NEK3-211ENST00000629912 LINC00526Q96FQ7 95 aa3.69□□□□□ -1.82
NEK3-211ENST00000629912 IGKV2D-24A0A075B6R9 120 aa3.68□□□□□ -1.82
NEK3-211ENST00000629912 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
NEK3-211ENST00000629912 RMI2Q96E14 147 aa3.68□□□□□ -1.82
NEK3-211ENST00000629912 FAM218AQ96MZ4 157 aa3.68□□□□□ -1.82
NEK3-211ENST00000629912 CAMK2N2Q96S95 79 aa3.68□□□□□ -1.82
NEK3-211ENST00000629912 MGAM2Q2M2H8 2515 aa3.68□□□□□ -1.82
NEK3-211ENST00000629912 NDUFC2-KCTD14E9PQ53 114 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 IGLV6-57P01721 117 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 TLX1NBP0CAT3 122 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 HIGD2BQ4VC39 106 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 Q6ZRU5 148 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 Q8NDZ9 215 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 LINC00167Q96N53 147 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 SIGMAR1Q99720 223 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 APLNQ9ULZ1 77 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 C22orf24Q9Y442 160 aa3.67□□□□□ -1.82
NEK3-211ENST00000629912 A0A087WYN8 130 aa3.66□□□□□ -1.82
NEK3-211ENST00000629912 TEX49A0A1B0GTD5 131 aa3.66□□□□□ -1.82
NEK3-211ENST00000629912 SNCGO76070 127 aa3.66□□□□□ -1.82
NEK3-211ENST00000629912 S100A7L2Q5SY68 101 aa3.66□□□□□ -1.82
NEK3-211ENST00000629912 CDIP1Q9H305 208 aa3.66□□□□□ -1.82
NEK3-211ENST00000629912 TRBV7-6A0A0J9YX20 115 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 FAM240AA0A1B0GVK7 77 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 M0R378 163 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 NCR3O14931 201 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 LECT2O14960 151 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 DNAL4O96015 105 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 VPREB1P12018 145 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 Q8N814 137 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 Q9HAA7 133 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 PLA2G2DQ9UNK4 145 aa3.65□□□□□ -1.83
NEK3-211ENST00000629912 USP17L23D6RBM5 183 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 H3BQ85 93 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 SLPIP03973 132 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 ACYP1P07311 99 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 SCGB1A1P11684 91 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
NEK3-211ENST00000629912 C6orf99Q4VX62 202 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 LINC00575Q6W349 94 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 Q6ZRP5 223 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 OBSCN-AS1Q96MR7 158 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 XAGE1AQ9HD64 81 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 PLECQ15149 4684 aaKnown RBP3.64□□□□□ -1.83
NEK3-211ENST00000629912 COL7A1Q02388 2944 aa3.64□□□□□ -1.83
NEK3-211ENST00000629912 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
NEK3-211ENST00000629912 TRBV10-3A0A0K0K1G6 114 aa3.63□□□□□ -1.83
NEK3-211ENST00000629912 TMEM256-PLSCR3K7ERE1 68 aa3.63□□□□□ -1.83
NEK3-211ENST00000629912 INAFM2P0DMQ5 153 aa3.63□□□□□ -1.83
NEK3-211ENST00000629912 CASC10Q5T4H9 136 aa3.63□□□□□ -1.83
NEK3-211ENST00000629912 ORMDL1Q9P0S3 153 aa3.63□□□□□ -1.83
NEK3-211ENST00000629912 IGLV5-37A0A075B6J1 123 aa3.62□□□□□ -1.83
NEK3-211ENST00000629912 TRAV23DV6A0A075B6W5 121 aa3.62□□□□□ -1.83
NEK3-211ENST00000629912 hADV29S1A0JD25 119 aa3.62□□□□□ -1.83
NEK3-211ENST00000629912 NUPR2A6NF83 97 aa3.62□□□□□ -1.83
NEK3-211ENST00000629912 PCP4P48539 62 aa3.62□□□□□ -1.83
NEK3-211ENST00000629912 GAGE2EQ4V326 116 aa3.62□□□□□ -1.83
NEK3-211ENST00000629912 C9orf129Q5T035 196 aaKnown RBP3.62□□□□□ -1.83
NEK3-211ENST00000629912 GAGE2DQ9UEU5 116 aa3.62□□□□□ -1.83
NEK3-211ENST00000629912 LOC107984640A0A0U1RRK4 108 aa3.61□□□□□ -1.83
NEK3-211ENST00000629912 JMJD7-PLA2G4BH0Y9G9 81 aa3.61□□□□□ -1.83
NEK3-211ENST00000629912 ZNF73O43830 326 aaPredicted RBP3.61□□□□□ -1.83
NEK3-211ENST00000629912 GHRHP01286 108 aa3.61□□□□□ -1.83
NEK3-211ENST00000629912 COX7BP24311 80 aa3.61□□□□□ -1.83
NEK3-211ENST00000629912 SDIM1Q6ZPB5 146 aa3.61□□□□□ -1.83
NEK3-211ENST00000629912 UBE2DNLQ8IWF7 75 aa3.61□□□□□ -1.83
NEK3-211ENST00000629912 DIRC1Q969H9 104 aa3.61□□□□□ -1.83
NEK3-211ENST00000629912 KCNQ1DNQ9H478 68 aa3.61□□□□□ -1.83
NEK3-211ENST00000629912 DNAH7Q8WXX0 4024 aa3.6□□□□□ -1.83
NEK3-211ENST00000629912 XGP55808 180 aa3.6□□□□□ -1.83
NEK3-211ENST00000629912 ELOF1P60002 83 aaKnown RBP3.6□□□□□ -1.83
NEK3-211ENST00000629912 CNBPP62633 177 aaKnown RBP3.6□□□□□ -1.83
NEK3-211ENST00000629912 KRTAP21-3Q3LHN1 58 aa3.6□□□□□ -1.83
NEK3-211ENST00000629912 C14orf177Q52M58 125 aa3.6□□□□□ -1.83
NEK3-211ENST00000629912 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.6□□□□□ -1.83
NEK3-211ENST00000629912 KRTAP1-5Q9BYS1 174 aa3.6□□□□□ -1.83
NEK3-211ENST00000629912 STAB2Q8WWQ8 2551 aa3.6□□□□□ -1.83
NEK3-211ENST00000629912 MT-ATP8P03928 68 aa3.59□□□□□ -1.83
NEK3-211ENST00000629912 TTC32Q5I0X7 151 aa3.59□□□□□ -1.83
NEK3-211ENST00000629912 SERTAD4-AS1Q5TG53 156 aa3.59□□□□□ -1.83
NEK3-211ENST00000629912 Q6Q795 121 aa3.59□□□□□ -1.83
NEK3-211ENST00000629912 LINC00528Q8N1L1 170 aa3.59□□□□□ -1.83
NEK3-211ENST00000629912 NKAPP1Q8N9T2 125 aa3.59□□□□□ -1.83
NEK3-211ENST00000629912 C7orf33Q8WU49 177 aa3.59□□□□□ -1.83
NEK3-211ENST00000629912 DNAH10Q8IVF4 4471 aa3.59□□□□□ -1.84
NEK3-211ENST00000629912 IGLV1-50A0A075B6I6 118 aa3.58□□□□□ -1.84
NEK3-211ENST00000629912 NBDYA0A0U1RRE5 68 aa3.58□□□□□ -1.84
NEK3-211ENST00000629912 CCKP06307 115 aa3.58□□□□□ -1.84
NEK3-211ENST00000629912 SPRR1AP35321 89 aa3.58□□□□□ -1.84
NEK3-211ENST00000629912 LINC00643Q86TS7 51 aa3.58□□□□□ -1.84
NEK3-211ENST00000629912 KRTAP7-1Q8IUC3 87 aa3.58□□□□□ -1.84
NEK3-211ENST00000629912 LRCOL1A6NCL2 159 aa3.57□□□□□ -1.84
NEK3-211ENST00000629912 C16orf90A8MZG2 172 aa3.57□□□□□ -1.84
NEK3-211ENST00000629912 KRTAP4-16G5E9R7 235 aaPredicted RBP3.57□□□□□ -1.84
NEK3-211ENST00000629912 PRYO14603 147 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms