RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 NDUFC2-KCTD14E9PQ53 114 aa4.94□□□□□ -1.62
PTP4A1-206ENST00000627002 M0R2N4 97 aa4.94□□□□□ -1.62
PTP4A1-206ENST00000627002 EIF4EBP3O60516 100 aaPredicted RBP4.94□□□□□ -1.62
PTP4A1-206ENST00000627002 NDUFC2O95298 119 aa4.94□□□□□ -1.62
PTP4A1-206ENST00000627002 Q6ZRN7 208 aaPredicted RBP4.94□□□□□ -1.62
PTP4A1-206ENST00000627002 CSMD3Q7Z407 3707 aa4.94□□□□□ -1.62
PTP4A1-206ENST00000627002 A0A1B0GV90 55 aa4.93□□□□□ -1.62
PTP4A1-206ENST00000627002 H3BUT2 72 aa4.93□□□□□ -1.62
PTP4A1-206ENST00000627002 LECT2O14960 151 aa4.93□□□□□ -1.62
PTP4A1-206ENST00000627002 TLX1NBP0CAT3 122 aa4.93□□□□□ -1.62
PTP4A1-206ENST00000627002 CNBPP62633 177 aaKnown RBP4.93□□□□□ -1.62
PTP4A1-206ENST00000627002 KRTAP17-1Q9BYP8 105 aa4.93□□□□□ -1.62
PTP4A1-206ENST00000627002 A0A1W2PPM0 123 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 LRCOL1A6NCL2 159 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 TSPAN13O95857 204 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 FABP2P12104 132 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 RPL13AP40429 203 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 C1orf134Q5TEV5 83 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 LYRM7Q5U5X0 104 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 PKIGQ9Y2B9 76 aa4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 EPPK1P58107 5090 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-206ENST00000627002 IGKV2-28A0A075B6P5 120 aa4.91□□□□□ -1.62
PTP4A1-206ENST00000627002 LOC107984640A0A0U1RRK4 108 aa4.91□□□□□ -1.62
PTP4A1-206ENST00000627002 IGKV2D-28P01615 120 aa4.91□□□□□ -1.62
PTP4A1-206ENST00000627002 SLPIP03973 132 aa4.91□□□□□ -1.62
PTP4A1-206ENST00000627002 WFDC2Q14508 124 aa4.91□□□□□ -1.62
PTP4A1-206ENST00000627002 VAMP3Q15836 100 aa4.91□□□□□ -1.62
PTP4A1-206ENST00000627002 Q1RN00 199 aa4.91□□□□□ -1.62
PTP4A1-206ENST00000627002 TRBV10-2A0A0K0K1G8 114 aa4.9□□□□□ -1.63
PTP4A1-206ENST00000627002 H7C2G1 150 aa4.9□□□□□ -1.63
PTP4A1-206ENST00000627002 PSMB2P49721 201 aa4.9□□□□□ -1.63
PTP4A1-206ENST00000627002 RPL18AQ02543 176 aaKnown RBP4.9□□□□□ -1.63
PTP4A1-206ENST00000627002 Q6ZRP5 223 aa4.9□□□□□ -1.63
PTP4A1-206ENST00000627002 NAA38Q9BRA0 125 aaKnown RBP4.9□□□□□ -1.63
PTP4A1-206ENST00000627002 TENM2Q9NT68 2774 aa4.9□□□□□ -1.63
PTP4A1-206ENST00000627002 RYR2Q92736 4967 aa4.9□□□□□ -1.63
PTP4A1-206ENST00000627002 STARD9Q9P2P6 4700 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 A0A087WTM6 91 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 COX6CP09669 75 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 GAGE2EQ4V326 116 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 GTF2H5Q6ZYL4 71 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 LINC00337Q8N6G1 96 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 Q8N814 137 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 OR13C6PQ8NH95 151 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 LYSTQ99698 3801 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 XAGE1AQ9HD64 81 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 GAGE2DQ9UEU5 116 aa4.89□□□□□ -1.63
PTP4A1-206ENST00000627002 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.88□□□□□ -1.63
PTP4A1-206ENST00000627002 GAGE10A6NGK3 116 aa4.88□□□□□ -1.63
PTP4A1-206ENST00000627002 SCGB1C2P0DMR2 95 aa4.88□□□□□ -1.63
PTP4A1-206ENST00000627002 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
PTP4A1-206ENST00000627002 PLA2G2DQ9UNK4 145 aa4.88□□□□□ -1.63
PTP4A1-206ENST00000627002 SPCS1Q9Y6A9 102 aa4.88□□□□□ -1.63
PTP4A1-206ENST00000627002 TRBV20-1A0A075B6N2 111 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 K7EP34 96 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 NCR3O14931 201 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 TRIAP1O43715 76 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 VPREB1P12018 145 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 RPL28P46779 137 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 PRR3P79522 188 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 GAGE2BQ13066 116 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 S100A7L2Q5SY68 101 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 C9orf129Q5T035 196 aaKnown RBP4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 C9orf163Q8N9P6 203 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 CBY1Q9Y3M2 126 aa4.87□□□□□ -1.63
PTP4A1-206ENST00000627002 DNAH1Q9P2D7 4330 aa4.86□□□□□ -1.63
PTP4A1-206ENST00000627002 C16orf90A8MZG2 172 aa4.86□□□□□ -1.63
PTP4A1-206ENST00000627002 M0R378 163 aa4.86□□□□□ -1.63
PTP4A1-206ENST00000627002 UBE2V1Q13404 147 aa4.86□□□□□ -1.63
PTP4A1-206ENST00000627002 NKAPP1Q8N9T2 125 aa4.86□□□□□ -1.63
PTP4A1-206ENST00000627002 Q8NDZ9 215 aa4.86□□□□□ -1.63
PTP4A1-206ENST00000627002 IGLV5-37A0A075B6J1 123 aa4.85□□□□□ -1.63
PTP4A1-206ENST00000627002 IGLV6-57P01721 117 aa4.85□□□□□ -1.63
PTP4A1-206ENST00000627002 SMIM11BQ8TCY0 68 aa4.85□□□□□ -1.63
PTP4A1-206ENST00000627002 LINC00474Q9P2X8 69 aa4.85□□□□□ -1.63
PTP4A1-206ENST00000627002 PLECQ15149 4684 aaKnown RBP4.85□□□□□ -1.63
PTP4A1-206ENST00000627002 SACSQ9NZJ4 4579 aa4.84□□□□□ -1.63
PTP4A1-206ENST00000627002 A0A096LNI7 61 aa4.84□□□□□ -1.63
PTP4A1-206ENST00000627002 H0YGX0 51 aa4.84□□□□□ -1.63
PTP4A1-206ENST00000627002 ATXN8Q156A1 80 aa4.84□□□□□ -1.63
PTP4A1-206ENST00000627002 TRAV23DV6A0A075B6W5 121 aa4.83□□□□□ -1.64
PTP4A1-206ENST00000627002 RTL8CO15255 209 aa4.83□□□□□ -1.64
PTP4A1-206ENST00000627002 TCL1BO95988 128 aa4.83□□□□□ -1.64
PTP4A1-206ENST00000627002 SERTAD4-AS1Q5TG53 156 aa4.83□□□□□ -1.64
PTP4A1-206ENST00000627002 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
PTP4A1-206ENST00000627002 VPS13DQ5THJ4 4388 aa4.83□□□□□ -1.64
PTP4A1-206ENST00000627002 ALMS1Q8TCU4 4167 aa4.82□□□□□ -1.64
PTP4A1-206ENST00000627002 IGLV5-52A0A0A0MRZ9 124 aa4.82□□□□□ -1.64
PTP4A1-206ENST00000627002 IGKV2-24A0A0C4DH68 120 aa4.82□□□□□ -1.64
PTP4A1-206ENST00000627002 TRBV10-3A0A0K0K1G6 114 aa4.82□□□□□ -1.64
PTP4A1-206ENST00000627002 H3BMG7 143 aa4.82□□□□□ -1.64
PTP4A1-206ENST00000627002 LST1O00453 97 aa4.82□□□□□ -1.64
PTP4A1-206ENST00000627002 FAM19A5Q7Z5A7 132 aaPredicted RBP4.82□□□□□ -1.64
PTP4A1-206ENST00000627002 TRBV7-6A0A0J9YX20 115 aa4.81□□□□□ -1.64
PTP4A1-206ENST00000627002 FAM168BA1KXE4 195 aa4.81□□□□□ -1.64
PTP4A1-206ENST00000627002 SNCGO76070 127 aa4.81□□□□□ -1.64
PTP4A1-206ENST00000627002 MRPL55Q7Z7F7 128 aaKnown RBP4.81□□□□□ -1.64
PTP4A1-206ENST00000627002 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms