RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CHTOPQ9Y3Y2 248 aaKnown RBP3.93□□□□□ -1.78
TCF4-249ENST00000625716 A0A096LNJ9 63 aa3.92□□□□□ -1.78
TCF4-249ENST00000625716 HSBP1O75506 76 aa3.92□□□□□ -1.78
TCF4-249ENST00000625716 IFI27L1Q96BM0 104 aa3.92□□□□□ -1.78
TCF4-249ENST00000625716 C22orf24Q9Y442 160 aa3.92□□□□□ -1.78
TCF4-249ENST00000625716 MYCBP2O75592 4640 aa3.91□□□□□ -1.78
TCF4-249ENST00000625716 TRGC2P03986 189 aa3.91□□□□□ -1.78
TCF4-249ENST00000625716 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
TCF4-249ENST00000625716 ZNF22P17026 224 aaPredicted RBP3.91□□□□□ -1.78
TCF4-249ENST00000625716 PFN2P35080 140 aa3.91□□□□□ -1.78
TCF4-249ENST00000625716 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
TCF4-249ENST00000625716 SFTA2Q6UW10 78 aa3.91□□□□□ -1.78
TCF4-249ENST00000625716 NKAPP1Q8N9T2 125 aa3.91□□□□□ -1.78
TCF4-249ENST00000625716 TRAV12-1A0A0B4J245 112 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 C11orf86A6NJI1 115 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 H0Y8G0 127 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 NUPR1O60356 82 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 SCO1O75880 301 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 COX17Q14061 63 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 MRPL55Q7Z7F7 128 aaKnown RBP3.9□□□□□ -1.79
TCF4-249ENST00000625716 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 FAM19A2Q8N3H0 131 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 TP73-AS1Q9UF72 201 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 ERG28Q9UKR5 140 aa3.9□□□□□ -1.79
TCF4-249ENST00000625716 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
TCF4-249ENST00000625716 H0Y9J4 135 aa3.89□□□□□ -1.79
TCF4-249ENST00000625716 LEPROTL1O95214 131 aa3.89□□□□□ -1.79
TCF4-249ENST00000625716 RPL24P83731 157 aaKnown RBP3.89□□□□□ -1.79
TCF4-249ENST00000625716 KRTAP11-1Q8IUC1 163 aa3.89□□□□□ -1.79
TCF4-249ENST00000625716 ZNF625Q96I27 306 aaPredicted RBP3.89□□□□□ -1.79
TCF4-249ENST00000625716 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
TCF4-249ENST00000625716 GAGE10A6NGK3 116 aa3.88□□□□□ -1.79
TCF4-249ENST00000625716 RPL37AP8A6NKH3 93 aa3.88□□□□□ -1.79
TCF4-249ENST00000625716 ZNF861PO60384 105 aa3.88□□□□□ -1.79
TCF4-249ENST00000625716 RPL28P46779 137 aaKnown RBP3.88□□□□□ -1.79
TCF4-249ENST00000625716 LINC00158P58513 81 aa3.88□□□□□ -1.79
TCF4-249ENST00000625716 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
TCF4-249ENST00000625716 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
TCF4-249ENST00000625716 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
TCF4-249ENST00000625716 LINC00167Q96N53 147 aa3.88□□□□□ -1.79
TCF4-249ENST00000625716 HSPB8Q9UJY1 196 aa3.88□□□□□ -1.79
TCF4-249ENST00000625716 HERC1Q15751 4861 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 IGLV5-37A0A075B6J1 123 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 LINC00587B1AMM8 73 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 BCE1O60756 84 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BKO60814 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 SERF1AO75920 110 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BJP06899 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 FABP4P15090 132 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BOP23527 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BBP33778 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 UBE2AP49459 152 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BDP58876 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BCP62807 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST2H2BEQ16778 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 MEIG1Q5JSS6 88 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 COA6Q5JTJ3 125 aaKnown RBP3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BHQ93079 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BNQ99877 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 HIST1H2BMQ99879 126 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 SND1-IT1Q9HBX3 110 aa3.87□□□□□ -1.79
TCF4-249ENST00000625716 IGLV1-50A0A075B6I6 118 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 IGKV2-28A0A075B6P5 120 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 A0A0U1RRA0 63 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 MYMXA0A1B0GTQ4 84 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 IGKV2D-28P01615 120 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 PLNP26678 52 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 RPL13AP40429 203 aaKnown RBP3.86□□□□□ -1.79
TCF4-249ENST00000625716 HERV-K104P63124 156 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 PRR26Q8N8Z3 221 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 MAP1LC3CQ9BXW4 147 aa3.86□□□□□ -1.79
TCF4-249ENST00000625716 HERVK_113P61574 105 aa3.85□□□□□ -1.79
TCF4-249ENST00000625716 PLEKHB2Q96CS7 222 aa3.85□□□□□ -1.79
TCF4-249ENST00000625716 NDUFA12Q9UI09 145 aa3.85□□□□□ -1.79
TCF4-249ENST00000625716 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
TCF4-249ENST00000625716 LEPROTO15243 131 aa3.84□□□□□ -1.79
TCF4-249ENST00000625716 DPM2O94777 84 aa3.84□□□□□ -1.79
TCF4-249ENST00000625716 IGKCP01834 107 aa3.84□□□□□ -1.79
TCF4-249ENST00000625716 SMIM13P0DJ93 91 aa3.84□□□□□ -1.79
TCF4-249ENST00000625716 VPREB1P12018 145 aa3.84□□□□□ -1.79
TCF4-249ENST00000625716 AKR1D1P51857 326 aa3.84□□□□□ -1.79
TCF4-249ENST00000625716 FAM19A1Q7Z5A9 133 aa3.84□□□□□ -1.79
TCF4-249ENST00000625716 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
TCF4-249ENST00000625716 M0R378 163 aa3.83□□□□□ -1.8
TCF4-249ENST00000625716 LGALS3P17931 250 aaKnown RBP3.83□□□□□ -1.8
TCF4-249ENST00000625716 S100A12P80511 92 aa3.83□□□□□ -1.8
TCF4-249ENST00000625716 BOD1L2Q8IYS8 172 aa3.83□□□□□ -1.8
TCF4-249ENST00000625716 MIR7-3HGQ8N6C7 128 aa3.83□□□□□ -1.8
TCF4-249ENST00000625716 PMCHL2Q9BQD1 86 aa3.83□□□□□ -1.8
TCF4-249ENST00000625716 TMEM126AQ9H061 195 aa3.83□□□□□ -1.8
TCF4-249ENST00000625716 TMEM238C9JI98 176 aa3.82□□□□□ -1.8
TCF4-249ENST00000625716 J3QQQ9 107 aa3.82□□□□□ -1.8
TCF4-249ENST00000625716 S100A6P06703 90 aa3.82□□□□□ -1.8
TCF4-249ENST00000625716 KRTAP1-4P0C5Y4 121 aa3.82□□□□□ -1.8
TCF4-249ENST00000625716 CRYGAP11844 174 aa3.82□□□□□ -1.8
TCF4-249ENST00000625716 NMUP48645 174 aa3.82□□□□□ -1.8
TCF4-249ENST00000625716 NCR3O14931 201 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms