RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 C15orf53Q8NAA6 179 aa13.22□□□□□ -0.29
PCDHB11-202ENST00000624887 NBEAL1Q6ZS30 2694 aa13.2□□□□□ -0.3
PCDHB11-202ENST00000624887 PRR3P79522 188 aaKnown RBP13.2□□□□□ -0.3
PCDHB11-202ENST00000624887 TRAV10A0A0B4J240 114 aa13.2□□□□□ -0.3
PCDHB11-202ENST00000624887 BAALC-AS2P0C853 105 aa13.19□□□□□ -0.3
PCDHB11-202ENST00000624887 A0A087WYN8 130 aa13.18□□□□□ -0.3
PCDHB11-202ENST00000624887 TRBV7-7A0A0K0K1E9 115 aa13.18□□□□□ -0.3
PCDHB11-202ENST00000624887 B5MCH6 92 aa13.18□□□□□ -0.3
PCDHB11-202ENST00000624887 TMEM126AQ9H061 195 aa13.18□□□□□ -0.3
PCDHB11-202ENST00000624887 SS18L2Q9UHA2 77 aa13.18□□□□□ -0.3
PCDHB11-202ENST00000624887 Q8NDZ9 215 aa13.17□□□□□ -0.3
PCDHB11-202ENST00000624887 MRAPQ8TCY5 172 aa13.17□□□□□ -0.3
PCDHB11-202ENST00000624887 C6orf48Q9UBA6 75 aa13.17□□□□□ -0.3
PCDHB11-202ENST00000624887 Q9HAA7 133 aa13.16□□□□□ -0.3
PCDHB11-202ENST00000624887 ZNF561-AS1K7EIQ3 104 aa13.15□□□□□ -0.3
PCDHB11-202ENST00000624887 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
PCDHB11-202ENST00000624887 C1orf43Q9BWL3 253 aa13.15□□□□□ -0.3
PCDHB11-202ENST00000624887 DNAL4O96015 105 aa13.14□□□□□ -0.31
PCDHB11-202ENST00000624887 ACYP1P07311 99 aa13.14□□□□□ -0.31
PCDHB11-202ENST00000624887 C22orf24Q9Y442 160 aa13.14□□□□□ -0.31
PCDHB11-202ENST00000624887 HIGD2BQ4VC39 106 aa13.14□□□□□ -0.31
PCDHB11-202ENST00000624887 CCDC179H3BU77 68 aa13.13□□□□□ -0.31
PCDHB11-202ENST00000624887 C15orf56Q8N910 161 aa13.13□□□□□ -0.31
PCDHB11-202ENST00000624887 NCR3O14931 201 aa13.12□□□□□ -0.31
PCDHB11-202ENST00000624887 CAMK2N2Q96S95 79 aa13.12□□□□□ -0.31
PCDHB11-202ENST00000624887 IMUPQ9GZP8 106 aa13.12□□□□□ -0.31
PCDHB11-202ENST00000624887 LECT2O14960 151 aa13.11□□□□□ -0.31
PCDHB11-202ENST00000624887 HUWE1Q7Z6Z7 4374 aaKnown RBP13.11□□□□□ -0.31
PCDHB11-202ENST00000624887 C2orf48Q96LS8 159 aa13.11□□□□□ -0.31
PCDHB11-202ENST00000624887 MGAM2Q2M2H8 2515 aa13.1□□□□□ -0.31
PCDHB11-202ENST00000624887 IGKV2D-24A0A075B6R9 120 aa13.1□□□□□ -0.31
PCDHB11-202ENST00000624887 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
PCDHB11-202ENST00000624887 LINC00588Q9Y4M8 146 aa13.09□□□□□ -0.31
PCDHB11-202ENST00000624887 A0A1B0GX51 115 aa13.08□□□□□ -0.32
PCDHB11-202ENST00000624887 Q6ZRU5 148 aa13.07□□□□□ -0.32
PCDHB11-202ENST00000624887 F8WDY8 70 aa13.06□□□□□ -0.32
PCDHB11-202ENST00000624887 IGLV6-57P01721 117 aa13.05□□□□□ -0.32
PCDHB11-202ENST00000624887 SDIM1Q6ZPB5 146 aa13.05□□□□□ -0.32
PCDHB11-202ENST00000624887 XAGE1AQ9HD64 81 aa13.05□□□□□ -0.32
PCDHB11-202ENST00000624887 RPL18AQ02543 176 aaKnown RBP13.05□□□□□ -0.32
PCDHB11-202ENST00000624887 C6orf99Q4VX62 202 aa13.05□□□□□ -0.32
PCDHB11-202ENST00000624887 LINC00167Q96N53 147 aa13.05□□□□□ -0.32
PCDHB11-202ENST00000624887 INAFM2P0DMQ5 153 aa13.03□□□□□ -0.32
PCDHB11-202ENST00000624887 Q8N814 137 aa13.03□□□□□ -0.32
PCDHB11-202ENST00000624887 SLPIP03973 132 aa13.02□□□□□ -0.32
PCDHB11-202ENST00000624887 ORMDL1Q9P0S3 153 aa13.02□□□□□ -0.32
PCDHB11-202ENST00000624887 NDUFC2-KCTD14E9PQ53 114 aa13.01□□□□□ -0.33
PCDHB11-202ENST00000624887 LINC00643Q86TS7 51 aa13.01□□□□□ -0.33
PCDHB11-202ENST00000624887 OBSCN-AS1Q96MR7 158 aa13□□□□□ -0.33
PCDHB11-202ENST00000624887 UPK3BQ9BT76 320 aa13□□□□□ -0.33
PCDHB11-202ENST00000624887 SYCNQ0VAF6 134 aa12.99□□□□□ -0.33
PCDHB11-202ENST00000624887 B9D2Q9BPU9 175 aa12.99□□□□□ -0.33
PCDHB11-202ENST00000624887 VPREB1P12018 145 aa12.98□□□□□ -0.33
PCDHB11-202ENST00000624887 TRBV10-3A0A0K0K1G6 114 aa12.98□□□□□ -0.33
PCDHB11-202ENST00000624887 KRTAP21-3Q3LHN1 58 aa12.98□□□□□ -0.33
PCDHB11-202ENST00000624887 C9orf129Q5T035 196 aaKnown RBP12.98□□□□□ -0.33
PCDHB11-202ENST00000624887 LINC00575Q6W349 94 aa12.98□□□□□ -0.33
PCDHB11-202ENST00000624887 Q6ZRP5 223 aa12.96□□□□□ -0.34
PCDHB11-202ENST00000624887 DNHD1Q96M86 4753 aa12.95□□□□□ -0.34
PCDHB11-202ENST00000624887 TRAV23DV6A0A075B6W5 121 aa12.95□□□□□ -0.34
PCDHB11-202ENST00000624887 SMCR5Q8TEV8 140 aa12.94□□□□□ -0.34
PCDHB11-202ENST00000624887 RMI2Q96E14 147 aa12.94□□□□□ -0.34
PCDHB11-202ENST00000624887 FAM236AA0A1B0GUQ0 79 aa12.93□□□□□ -0.34
PCDHB11-202ENST00000624887 FAM236BA0A1B0GV22 79 aa12.93□□□□□ -0.34
PCDHB11-202ENST00000624887 TMEM256-PLSCR3K7ERE1 68 aa12.93□□□□□ -0.34
PCDHB11-202ENST00000624887 M0R378 163 aa12.93□□□□□ -0.34
PCDHB11-202ENST00000624887 hADV29S1A0JD25 119 aa12.92□□□□□ -0.34
PCDHB11-202ENST00000624887 DIRC1Q969H9 104 aa12.92□□□□□ -0.34
PCDHB11-202ENST00000624887 C14orf132Q9NPU4 83 aa12.92□□□□□ -0.34
PCDHB11-202ENST00000624887 DNAH1Q9P2D7 4330 aa12.91□□□□□ -0.34
PCDHB11-202ENST00000624887 USP17L23D6RBM5 183 aa12.91□□□□□ -0.34
PCDHB11-202ENST00000624887 CASC10Q5T4H9 136 aa12.91□□□□□ -0.34
PCDHB11-202ENST00000624887 GAGE2AQ6NT46 116 aa12.91□□□□□ -0.34
PCDHB11-202ENST00000624887 DNAH9Q9NYC9 4486 aa12.91□□□□□ -0.34
PCDHB11-202ENST00000624887 COL7A1Q02388 2944 aa12.9□□□□□ -0.34
PCDHB11-202ENST00000624887 ZNF73O43830 326 aaPredicted RBP12.9□□□□□ -0.34
PCDHB11-202ENST00000624887 SMIM20Q8N5G0 67 aa12.9□□□□□ -0.34
PCDHB11-202ENST00000624887 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
PCDHB11-202ENST00000624887 JMJD7-PLA2G4BH0Y9G9 81 aa12.88□□□□□ -0.35
PCDHB11-202ENST00000624887 C3orf22Q8N5N4 141 aa12.88□□□□□ -0.35
PCDHB11-202ENST00000624887 STAB2Q8WWQ8 2551 aa12.88□□□□□ -0.35
PCDHB11-202ENST00000624887 TRBV7-6A0A0J9YX20 115 aa12.87□□□□□ -0.35
PCDHB11-202ENST00000624887 UQCRQO14949 82 aa12.87□□□□□ -0.35
PCDHB11-202ENST00000624887 HIST1H4AP62805 103 aaKnown RBP12.85□□□□□ -0.35
PCDHB11-202ENST00000624887 COX7BP24311 80 aa12.85□□□□□ -0.35
PCDHB11-202ENST00000624887 ELOF1P60002 83 aaKnown RBP12.85□□□□□ -0.35
PCDHB11-202ENST00000624887 APLNQ9ULZ1 77 aa12.83□□□□□ -0.36
PCDHB11-202ENST00000624887 Q6ZQY7 126 aa12.81□□□□□ -0.36
PCDHB11-202ENST00000624887 PLA2G2DQ9UNK4 145 aa12.81□□□□□ -0.36
PCDHB11-202ENST00000624887 H3BQ85 93 aa12.81□□□□□ -0.36
PCDHB11-202ENST00000624887 C9orf153Q5TBE3 101 aa12.81□□□□□ -0.36
PCDHB11-202ENST00000624887 SERTAD4-AS1Q5TG53 156 aa12.81□□□□□ -0.36
PCDHB11-202ENST00000624887 CCKP06307 115 aa12.8□□□□□ -0.36
PCDHB11-202ENST00000624887 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
PCDHB11-202ENST00000624887 KRTAP1-5Q9BYS1 174 aa12.8□□□□□ -0.36
PCDHB11-202ENST00000624887 COX7CP15954 63 aa12.79□□□□□ -0.36
PCDHB11-202ENST00000624887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.79□□□□□ -0.36
PCDHB11-202ENST00000624887 ATOX1O00244 68 aa12.78□□□□□ -0.36
PCDHB11-202ENST00000624887 LINC00528Q8N1L1 170 aa12.78□□□□□ -0.36
PCDHB11-202ENST00000624887 DYNC2H1Q8NCM8 4307 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms