RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
SRGAP2-217ENST00000624873 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
SRGAP2-217ENST00000624873 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
SRGAP2-217ENST00000624873 TEX49A0A1B0GTD5 131 aa6.95□□□□□ -1.3
SRGAP2-217ENST00000624873 B5MCH6 92 aa6.95□□□□□ -1.3
SRGAP2-217ENST00000624873 LST1O00453 97 aa6.95□□□□□ -1.3
SRGAP2-217ENST00000624873 NDUFV3P56181 108 aaKnown RBP6.94□□□□□ -1.3
SRGAP2-217ENST00000624873 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
SRGAP2-217ENST00000624873 Q8N3U1 123 aa6.94□□□□□ -1.3
SRGAP2-217ENST00000624873 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
SRGAP2-217ENST00000624873 MAP1AP78559 2803 aaPredicted RBP6.94□□□□□ -1.3
SRGAP2-217ENST00000624873 C6orf48Q9UBA6 75 aa6.93□□□□□ -1.3
SRGAP2-217ENST00000624873 IGLV5-45A0A087WSX0 123 aa6.93□□□□□ -1.3
SRGAP2-217ENST00000624873 Q6JHZ5 121 aa6.93□□□□□ -1.3
SRGAP2-217ENST00000624873 SZT2Q5T011 3432 aa6.92□□□□□ -1.3
SRGAP2-217ENST00000624873 CFAP54Q96N23 3096 aa6.92□□□□□ -1.3
SRGAP2-217ENST00000624873 NOTCH1P46531 2555 aa6.92□□□□□ -1.3
SRGAP2-217ENST00000624873 GVQW2A0A096LPI5 108 aaPredicted RBP6.92□□□□□ -1.3
SRGAP2-217ENST00000624873 Q8N814 137 aa6.91□□□□□ -1.3
SRGAP2-217ENST00000624873 VPS13AQ96RL7 3174 aa6.9□□□□□ -1.3
SRGAP2-217ENST00000624873 LINC00643Q86TS7 51 aa6.9□□□□□ -1.3
SRGAP2-217ENST00000624873 PRLHP81277 87 aa6.9□□□□□ -1.3
SRGAP2-217ENST00000624873 LINC00336Q6ZUF6 198 aa6.9□□□□□ -1.31
SRGAP2-217ENST00000624873 Q9BRP9 147 aa6.9□□□□□ -1.31
SRGAP2-217ENST00000624873 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
SRGAP2-217ENST00000624873 Q6ZRP5 223 aa6.89□□□□□ -1.31
SRGAP2-217ENST00000624873 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
SRGAP2-217ENST00000624873 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
SRGAP2-217ENST00000624873 SMCR5Q8TEV8 140 aa6.88□□□□□ -1.31
SRGAP2-217ENST00000624873 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
SRGAP2-217ENST00000624873 ATP5EP2Q5VTU8 51 aa6.88□□□□□ -1.31
SRGAP2-217ENST00000624873 COL6A3P12111 3177 aa6.87□□□□□ -1.31
SRGAP2-217ENST00000624873 ATOX1O00244 68 aa6.86□□□□□ -1.31
SRGAP2-217ENST00000624873 PRR34Q9NV39 138 aa6.86□□□□□ -1.31
SRGAP2-217ENST00000624873 FRYLO94915 3013 aa6.86□□□□□ -1.31
SRGAP2-217ENST00000624873 UBR5O95071 2799 aaPredicted RBP6.86□□□□□ -1.31
SRGAP2-217ENST00000624873 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
SRGAP2-217ENST00000624873 LIMD2Q9BT23 127 aa6.85□□□□□ -1.31
SRGAP2-217ENST00000624873 CHKB-CPT1BH3BT56 60 aa6.85□□□□□ -1.31
SRGAP2-217ENST00000624873 SCXQ7RTU7 201 aa6.85□□□□□ -1.31
SRGAP2-217ENST00000624873 LINC00337Q8N6G1 96 aa6.85□□□□□ -1.31
SRGAP2-217ENST00000624873 XGP55808 180 aa6.85□□□□□ -1.31
SRGAP2-217ENST00000624873 A0A087WTM6 91 aa6.84□□□□□ -1.31
SRGAP2-217ENST00000624873 LINC00575Q6W349 94 aa6.84□□□□□ -1.31
SRGAP2-217ENST00000624873 PHF5AQ7RTV0 110 aaKnown RBP6.84□□□□□ -1.31
SRGAP2-217ENST00000624873 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
SRGAP2-217ENST00000624873 CRYGAP11844 174 aa6.82□□□□□ -1.32
SRGAP2-217ENST00000624873 ITPR2Q14571 2701 aa6.82□□□□□ -1.32
SRGAP2-217ENST00000624873 A0A087WYN8 130 aa6.82□□□□□ -1.32
SRGAP2-217ENST00000624873 FAM236AA0A1B0GUQ0 79 aa6.82□□□□□ -1.32
SRGAP2-217ENST00000624873 FAM236BA0A1B0GV22 79 aa6.82□□□□□ -1.32
SRGAP2-217ENST00000624873 FAM19A3Q7Z5A8 133 aa6.82□□□□□ -1.32
SRGAP2-217ENST00000624873 LINC00476Q8WZB0 136 aa6.82□□□□□ -1.32
SRGAP2-217ENST00000624873 NBEAL1Q6ZS30 2694 aa6.81□□□□□ -1.32
SRGAP2-217ENST00000624873 RPL37AP61513 92 aaKnown RBP6.8□□□□□ -1.32
SRGAP2-217ENST00000624873 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
SRGAP2-217ENST00000624873 TRBV7-6A0A0J9YX20 115 aa6.79□□□□□ -1.32
SRGAP2-217ENST00000624873 TMEM258P61165 79 aa6.79□□□□□ -1.32
SRGAP2-217ENST00000624873 CASC10Q5T4H9 136 aa6.79□□□□□ -1.32
SRGAP2-217ENST00000624873 CASC2Q6XLA1 102 aa6.79□□□□□ -1.32
SRGAP2-217ENST00000624873 C9orf163Q8N9P6 203 aa6.79□□□□□ -1.32
SRGAP2-217ENST00000624873 A0A087WSZ3 146 aa6.79□□□□□ -1.32
SRGAP2-217ENST00000624873 SDIM1Q6ZPB5 146 aa6.78□□□□□ -1.32
SRGAP2-217ENST00000624873 BCE1O60756 84 aa6.78□□□□□ -1.32
SRGAP2-217ENST00000624873 J3QL48 77 aa6.78□□□□□ -1.32
SRGAP2-217ENST00000624873 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
SRGAP2-217ENST00000624873 J3KT08 172 aa6.77□□□□□ -1.33
SRGAP2-217ENST00000624873 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
SRGAP2-217ENST00000624873 DMXL2Q8TDJ6 3036 aa6.77□□□□□ -1.33
SRGAP2-217ENST00000624873 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
SRGAP2-217ENST00000624873 Q6ZRX8 168 aa6.76□□□□□ -1.33
SRGAP2-217ENST00000624873 MOBPQ13875 183 aa6.76□□□□□ -1.33
SRGAP2-217ENST00000624873 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
SRGAP2-217ENST00000624873 TYMSOSQ8TAI1 123 aa6.76□□□□□ -1.33
SRGAP2-217ENST00000624873 ITPR1Q14643 2758 aa6.75□□□□□ -1.33
SRGAP2-217ENST00000624873 HIVEP1P15822 2718 aa6.75□□□□□ -1.33
SRGAP2-217ENST00000624873 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
SRGAP2-217ENST00000624873 VPREB1P12018 145 aa6.74□□□□□ -1.33
SRGAP2-217ENST00000624873 IGHV6-1A0A0B4J1U7 121 aa6.74□□□□□ -1.33
SRGAP2-217ENST00000624873 ELOF1P60002 83 aaKnown RBP6.74□□□□□ -1.33
SRGAP2-217ENST00000624873 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
SRGAP2-217ENST00000624873 ATMQ13315 3056 aa6.73□□□□□ -1.33
SRGAP2-217ENST00000624873 V9GYY9 64 aa6.73□□□□□ -1.33
SRGAP2-217ENST00000624873 COL12A1Q99715 3063 aa6.73□□□□□ -1.33
SRGAP2-217ENST00000624873 SPACA4Q8TDM5 124 aa6.73□□□□□ -1.33
SRGAP2-217ENST00000624873 LAMA1P25391 3075 aa6.72□□□□□ -1.33
SRGAP2-217ENST00000624873 Q8NBF4 154 aa6.72□□□□□ -1.33
SRGAP2-217ENST00000624873 FRYQ5TBA9 3013 aa6.71□□□□□ -1.33
SRGAP2-217ENST00000624873 CNBPP62633 177 aaKnown RBP6.71□□□□□ -1.34
SRGAP2-217ENST00000624873 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
SRGAP2-217ENST00000624873 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
SRGAP2-217ENST00000624873 SEC61GP60059 68 aa6.7□□□□□ -1.34
SRGAP2-217ENST00000624873 KRTAP21-3Q3LHN1 58 aa6.7□□□□□ -1.34
SRGAP2-217ENST00000624873 SERTAD4-AS1Q5TG53 156 aa6.69□□□□□ -1.34
SRGAP2-217ENST00000624873 NSD1Q96L73 2696 aaPredicted RBP6.69□□□□□ -1.34
SRGAP2-217ENST00000624873 SMR3BP02814 79 aaPredicted RBP6.69□□□□□ -1.34
SRGAP2-217ENST00000624873 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
SRGAP2-217ENST00000624873 IGLV1-50A0A075B6I6 118 aa6.69□□□□□ -1.34
SRGAP2-217ENST00000624873 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
SRGAP2-217ENST00000624873 TNP2Q05952 138 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 470.8 ms