RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PRO1854Q9UHT4 67 aa11.57□□□□□ -0.56
PTCHD3-202ENST00000622555 RYR2Q92736 4967 aa11.56□□□□□ -0.56
PTCHD3-202ENST00000622555 IFITM1P13164 125 aa11.56□□□□□ -0.56
PTCHD3-202ENST00000622555 COX17Q14061 63 aa11.56□□□□□ -0.56
PTCHD3-202ENST00000622555 DAND5Q8N907 189 aa11.56□□□□□ -0.56
PTCHD3-202ENST00000622555 FRAS1Q86XX4 4008 aa11.54□□□□□ -0.56
PTCHD3-202ENST00000622555 MIR7-3HGQ8N6C7 128 aa11.54□□□□□ -0.56
PTCHD3-202ENST00000622555 DNAH17Q9UFH2 4485 aa11.54□□□□□ -0.56
PTCHD3-202ENST00000622555 LINC00336Q6ZUF6 198 aa11.53□□□□□ -0.56
PTCHD3-202ENST00000622555 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.56
PTCHD3-202ENST00000622555 NDUFC2-KCTD14E9PQ53 114 aa11.52□□□□□ -0.57
PTCHD3-202ENST00000622555 FUSP35637 526 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTCHD3-202ENST00000622555 NPC2P61916 151 aa11.52□□□□□ -0.57
PTCHD3-202ENST00000622555 CBY1Q9Y3M2 126 aa11.52□□□□□ -0.57
PTCHD3-202ENST00000622555 RPL18AQ02543 176 aaKnown RBP11.51□□□□□ -0.57
PTCHD3-202ENST00000622555 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
PTCHD3-202ENST00000622555 IGLV5-52A0A0A0MRZ9 124 aa11.5□□□□□ -0.57
PTCHD3-202ENST00000622555 LOC107984640A0A0U1RRK4 108 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 LINC01620Q4KN68 170 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 GAGE2EQ4V326 116 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 Q6ZRP5 223 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 GAGE2DQ9UEU5 116 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 LINC00308Q8TCZ7 52 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 PRO0461Q9UI25 63 aa11.49□□□□□ -0.57
PTCHD3-202ENST00000622555 LYRM7Q5U5X0 104 aa11.48□□□□□ -0.57
PTCHD3-202ENST00000622555 F8W1H4 67 aa11.47□□□□□ -0.57
PTCHD3-202ENST00000622555 H3BMG7 143 aa11.47□□□□□ -0.57
PTCHD3-202ENST00000622555 KRTAP10-2P60368 255 aa11.47□□□□□ -0.57
PTCHD3-202ENST00000622555 GAGE2BQ13066 116 aa11.47□□□□□ -0.57
PTCHD3-202ENST00000622555 OCIAD2Q56VL3 154 aa11.46□□□□□ -0.57
PTCHD3-202ENST00000622555 COPS9Q8WXC6 57 aa11.46□□□□□ -0.57
PTCHD3-202ENST00000622555 XAGE1AQ9HD64 81 aa11.46□□□□□ -0.57
PTCHD3-202ENST00000622555 TRBV20-1A0A075B6N2 111 aa11.46□□□□□ -0.58
PTCHD3-202ENST00000622555 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.58
PTCHD3-202ENST00000622555 SOSTDC1Q6X4U4 206 aa11.46□□□□□ -0.58
PTCHD3-202ENST00000622555 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.58
PTCHD3-202ENST00000622555 PKIGQ9Y2B9 76 aa11.46□□□□□ -0.58
PTCHD3-202ENST00000622555 A0A096LNI7 61 aa11.43□□□□□ -0.58
PTCHD3-202ENST00000622555 SDIM1Q6ZPB5 146 aa11.43□□□□□ -0.58
PTCHD3-202ENST00000622555 TCL1BO95988 128 aa11.43□□□□□ -0.58
PTCHD3-202ENST00000622555 FAT2Q9NYQ8 4349 aa11.42□□□□□ -0.58
PTCHD3-202ENST00000622555 IGKV2-24A0A0C4DH68 120 aa11.42□□□□□ -0.58
PTCHD3-202ENST00000622555 C16orf90A8MZG2 172 aa11.42□□□□□ -0.58
PTCHD3-202ENST00000622555 PSMB2P49721 201 aa11.42□□□□□ -0.58
PTCHD3-202ENST00000622555 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
PTCHD3-202ENST00000622555 HECTD4Q9Y4D8 3996 aa11.4□□□□□ -0.58
PTCHD3-202ENST00000622555 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
PTCHD3-202ENST00000622555 SCGB1C2P0DMR2 95 aa11.39□□□□□ -0.59
PTCHD3-202ENST00000622555 H7C2G1 150 aa11.38□□□□□ -0.59
PTCHD3-202ENST00000622555 K7ERU9 68 aa11.38□□□□□ -0.59
PTCHD3-202ENST00000622555 TRIAP1O43715 76 aa11.38□□□□□ -0.59
PTCHD3-202ENST00000622555 SMCPP49901 116 aaPredicted RBP11.38□□□□□ -0.59
PTCHD3-202ENST00000622555 A0A1B0GVY2 172 aa11.38□□□□□ -0.59
PTCHD3-202ENST00000622555 RYR3Q15413 4870 aa11.37□□□□□ -0.59
PTCHD3-202ENST00000622555 DNAH11Q96DT5 4516 aa11.37□□□□□ -0.59
PTCHD3-202ENST00000622555 LINC00474Q9P2X8 69 aa11.37□□□□□ -0.59
PTCHD3-202ENST00000622555 RPL13AP40429 203 aaKnown RBP11.36□□□□□ -0.59
PTCHD3-202ENST00000622555 Q1RN00 199 aa11.36□□□□□ -0.59
PTCHD3-202ENST00000622555 Q8NDZ9 215 aa11.36□□□□□ -0.59
PTCHD3-202ENST00000622555 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
PTCHD3-202ENST00000622555 PCP4P48539 62 aa11.35□□□□□ -0.59
PTCHD3-202ENST00000622555 LINC01600Q96MT4 127 aa11.35□□□□□ -0.59
PTCHD3-202ENST00000622555 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.35□□□□□ -0.59
PTCHD3-202ENST00000622555 PKD1P98161 4303 aa11.34□□□□□ -0.59
PTCHD3-202ENST00000622555 PANO1I0J062 215 aa11.34□□□□□ -0.59
PTCHD3-202ENST00000622555 M0QXV9 152 aa11.34□□□□□ -0.59
PTCHD3-202ENST00000622555 NDUFC2O95298 119 aa11.34□□□□□ -0.59
PTCHD3-202ENST00000622555 PRR3P79522 188 aaKnown RBP11.34□□□□□ -0.59
PTCHD3-202ENST00000622555 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
PTCHD3-202ENST00000622555 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
PTCHD3-202ENST00000622555 NCR3O14931 201 aa11.33□□□□□ -0.6
PTCHD3-202ENST00000622555 VPREB1P12018 145 aa11.33□□□□□ -0.6
PTCHD3-202ENST00000622555 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
PTCHD3-202ENST00000622555 MTURNQ8N3F0 131 aa11.33□□□□□ -0.6
PTCHD3-202ENST00000622555 PLA2G2DQ9UNK4 145 aa11.33□□□□□ -0.6
PTCHD3-202ENST00000622555 ATXN8Q156A1 80 aa11.32□□□□□ -0.6
PTCHD3-202ENST00000622555 SPACA4Q8TDM5 124 aa11.32□□□□□ -0.6
PTCHD3-202ENST00000622555 IGKV2-28A0A075B6P5 120 aa11.32□□□□□ -0.6
PTCHD3-202ENST00000622555 IGKV2D-28P01615 120 aa11.32□□□□□ -0.6
PTCHD3-202ENST00000622555 KRTAP10-1P60331 282 aa11.32□□□□□ -0.6
PTCHD3-202ENST00000622555 ETDBQ3ZM63 59 aa11.32□□□□□ -0.6
PTCHD3-202ENST00000622555 COX6CP09669 75 aa11.31□□□□□ -0.6
PTCHD3-202ENST00000622555 C21orf62-AS1Q17RA5 79 aa11.31□□□□□ -0.6
PTCHD3-202ENST00000622555 NKAPP1Q8N9T2 125 aa11.31□□□□□ -0.6
PTCHD3-202ENST00000622555 A0A1W2PNN7 141 aa11.3□□□□□ -0.6
PTCHD3-202ENST00000622555 DNAH5Q8TE73 4624 aa11.29□□□□□ -0.6
PTCHD3-202ENST00000622555 TRAV13-2A0A0B4J235 113 aa11.29□□□□□ -0.6
PTCHD3-202ENST00000622555 KRTAP7-1Q8IUC3 87 aa11.29□□□□□ -0.6
PTCHD3-202ENST00000622555 IGLV5-37A0A075B6J1 123 aa11.28□□□□□ -0.6
PTCHD3-202ENST00000622555 LINC00337Q8N6G1 96 aa11.28□□□□□ -0.6
PTCHD3-202ENST00000622555 TRBV10-2A0A0K0K1G8 114 aa11.27□□□□□ -0.61
PTCHD3-202ENST00000622555 LST1O00453 97 aa11.27□□□□□ -0.61
PTCHD3-202ENST00000622555 OR13C6PQ8NH95 151 aa11.27□□□□□ -0.61
PTCHD3-202ENST00000622555 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
PTCHD3-202ENST00000622555 A0A087WYN8 130 aa11.26□□□□□ -0.61
PTCHD3-202ENST00000622555 M0R378 163 aa11.26□□□□□ -0.61
PTCHD3-202ENST00000622555 FAM30AQ9NZY2 134 aa11.26□□□□□ -0.61
PTCHD3-202ENST00000622555 C9JAW5 83 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms