RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
TNFAIP3-210ENST00000620204 IGHV4-28A0A0C4DH34 117 aa6.81□□□□□ -1.32
TNFAIP3-210ENST00000620204 NREPQ16612 68 aa6.81□□□□□ -1.32
TNFAIP3-210ENST00000620204 LINC00959A0A1B0GUT2 108 aa6.8□□□□□ -1.32
TNFAIP3-210ENST00000620204 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
TNFAIP3-210ENST00000620204 TRBV6-8A0A0A6YYG3 113 aa6.8□□□□□ -1.32
TNFAIP3-210ENST00000620204 TMEM254Q8TBM7 123 aa6.79□□□□□ -1.32
TNFAIP3-210ENST00000620204 NBPF19A0A087WUL8 3843 aa6.79□□□□□ -1.32
TNFAIP3-210ENST00000620204 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
TNFAIP3-210ENST00000620204 BPY2O14599 106 aa6.79□□□□□ -1.32
TNFAIP3-210ENST00000620204 ANGP03950 147 aaKnown RBP6.79□□□□□ -1.32
TNFAIP3-210ENST00000620204 CELA1Q9UNI1 258 aa6.78□□□□□ -1.32
TNFAIP3-210ENST00000620204 Q6ZQT0 140 aa6.78□□□□□ -1.32
TNFAIP3-210ENST00000620204 XAGE1AQ9HD64 81 aa6.78□□□□□ -1.32
TNFAIP3-210ENST00000620204 ZNF561-AS1K7EIQ3 104 aa6.78□□□□□ -1.32
TNFAIP3-210ENST00000620204 GYPEP15421 78 aa6.78□□□□□ -1.32
TNFAIP3-210ENST00000620204 KLKP1Q107X0 134 aa6.78□□□□□ -1.32
TNFAIP3-210ENST00000620204 A0A096LNT2 108 aa6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 DEFB114Q30KQ6 69 aa6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 LINC00482Q8N8I6 264 aa6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 KMT2BQ9UMN6 2715 aaPredicted RBP6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 C3orf84H3BNL1 204 aa6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
TNFAIP3-210ENST00000620204 ATRQ13535 2644 aa6.76□□□□□ -1.33
TNFAIP3-210ENST00000620204 FAM229BQ4G0N7 80 aa6.76□□□□□ -1.33
TNFAIP3-210ENST00000620204 PSPHP1O15172 72 aa6.76□□□□□ -1.33
TNFAIP3-210ENST00000620204 SPATA3Q8NHX4 192 aa6.76□□□□□ -1.33
TNFAIP3-210ENST00000620204 IL17DQ8TAD2 202 aa6.76□□□□□ -1.33
TNFAIP3-210ENST00000620204 F8WDY8 70 aa6.76□□□□□ -1.33
TNFAIP3-210ENST00000620204 NANOS2P60321 138 aaKnown RBP6.76□□□□□ -1.33
TNFAIP3-210ENST00000620204 LINC00575Q6W349 94 aa6.76□□□□□ -1.33
TNFAIP3-210ENST00000620204 HTN3P15516 51 aa6.75□□□□□ -1.33
TNFAIP3-210ENST00000620204 NDUFC1O43677 76 aa6.75□□□□□ -1.33
TNFAIP3-210ENST00000620204 NIPBLQ6KC79 2804 aaeCLIP6.75□□□□□ -1.33
TNFAIP3-210ENST00000620204 HIGD2AQ9BW72 106 aa6.75□□□□□ -1.33
TNFAIP3-210ENST00000620204 MUC7Q8TAX7 377 aa6.74□□□□□ -1.33
TNFAIP3-210ENST00000620204 UNQ6190/PRO20217Q6UXQ8 127 aa6.74□□□□□ -1.33
TNFAIP3-210ENST00000620204 C6orf223Q8N319 242 aa6.74□□□□□ -1.33
TNFAIP3-210ENST00000620204 C16orf95Q9H693 158 aa6.74□□□□□ -1.33
TNFAIP3-210ENST00000620204 SETXQ7Z333 2677 aaKnown RBP6.74□□□□□ -1.33
TNFAIP3-210ENST00000620204 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
TNFAIP3-210ENST00000620204 DEFB4AO15263 64 aa6.73□□□□□ -1.33
TNFAIP3-210ENST00000620204 ESRGQ1W209 222 aa6.73□□□□□ -1.33
TNFAIP3-210ENST00000620204 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
TNFAIP3-210ENST00000620204 PRYO14603 147 aa6.72□□□□□ -1.33
TNFAIP3-210ENST00000620204 LINC01006Q8NI28 216 aa6.72□□□□□ -1.33
TNFAIP3-210ENST00000620204 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
TNFAIP3-210ENST00000620204 DNAJC9-AS1A6NH13 148 aa6.72□□□□□ -1.33
TNFAIP3-210ENST00000620204 Q6YL49 198 aa6.72□□□□□ -1.33
TNFAIP3-210ENST00000620204 LY6G6DO95868 133 aa6.72□□□□□ -1.33
TNFAIP3-210ENST00000620204 Q8IZM0 81 aa6.72□□□□□ -1.33
TNFAIP3-210ENST00000620204 SPAG11BQ08648 103 aa6.71□□□□□ -1.34
TNFAIP3-210ENST00000620204 DIRC1Q969H9 104 aa6.71□□□□□ -1.34
TNFAIP3-210ENST00000620204 ZNF702PQ9H963 129 aa6.71□□□□□ -1.34
TNFAIP3-210ENST00000620204 C16orf74Q96GX8 76 aa6.7□□□□□ -1.34
TNFAIP3-210ENST00000620204 INAFM1C9JVW0 142 aa6.7□□□□□ -1.34
TNFAIP3-210ENST00000620204 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
TNFAIP3-210ENST00000620204 BAHCC1Q9P281 2608 aa6.7□□□□□ -1.34
TNFAIP3-210ENST00000620204 PDE6GP18545 87 aa6.7□□□□□ -1.34
TNFAIP3-210ENST00000620204 KRTAP1-3Q8IUG1 177 aa6.7□□□□□ -1.34
TNFAIP3-210ENST00000620204 CXCL6P80162 114 aa6.69□□□□□ -1.34
TNFAIP3-210ENST00000620204 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
TNFAIP3-210ENST00000620204 Q8NDZ9 215 aa6.69□□□□□ -1.34
TNFAIP3-210ENST00000620204 REG3AQ06141 175 aa6.68□□□□□ -1.34
TNFAIP3-210ENST00000620204 PMAIP1Q13794 54 aa6.68□□□□□ -1.34
TNFAIP3-210ENST00000620204 HIGD2BQ4VC39 106 aa6.68□□□□□ -1.34
TNFAIP3-210ENST00000620204 KLK12Q9UKR0 248 aa6.68□□□□□ -1.34
TNFAIP3-210ENST00000620204 HIVEP1P15822 2718 aa6.68□□□□□ -1.34
TNFAIP3-210ENST00000620204 COX7BP24311 80 aa6.68□□□□□ -1.34
TNFAIP3-210ENST00000620204 TRBV7-4A0A0J9YYF1 115 aa6.67□□□□□ -1.34
TNFAIP3-210ENST00000620204 CCL24O00175 119 aa6.67□□□□□ -1.34
TNFAIP3-210ENST00000620204 RETNQ9HD89 108 aa6.67□□□□□ -1.34
TNFAIP3-210ENST00000620204 MAST4O15021 2626 aa6.67□□□□□ -1.34
TNFAIP3-210ENST00000620204 LOC110117498A0A087WWA1 95 aa6.67□□□□□ -1.34
TNFAIP3-210ENST00000620204 CYSRT1A8MQ03 144 aa6.67□□□□□ -1.34
TNFAIP3-210ENST00000620204 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
TNFAIP3-210ENST00000620204 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
TNFAIP3-210ENST00000620204 BCE1O60756 84 aa6.66□□□□□ -1.34
TNFAIP3-210ENST00000620204 CD164L2Q6UWJ8 174 aa6.66□□□□□ -1.34
TNFAIP3-210ENST00000620204 ZNF73O43830 326 aaPredicted RBP6.65□□□□□ -1.34
TNFAIP3-210ENST00000620204 ZNF469Q96JG9 3925 aaPredicted RBP6.65□□□□□ -1.35
TNFAIP3-210ENST00000620204 C4orf3Q8WVX3 66 aa6.65□□□□□ -1.35
TNFAIP3-210ENST00000620204 PDZD2O15018 2839 aa6.64□□□□□ -1.35
TNFAIP3-210ENST00000620204 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
TNFAIP3-210ENST00000620204 OTOGQ6ZRI0 2925 aa6.64□□□□□ -1.35
TNFAIP3-210ENST00000620204 SMIM29Q86T20 159 aa6.63□□□□□ -1.35
TNFAIP3-210ENST00000620204 COX17Q14061 63 aa6.63□□□□□ -1.35
TNFAIP3-210ENST00000620204 KIAA0087Q14695 138 aa6.62□□□□□ -1.35
TNFAIP3-210ENST00000620204 NSD1Q96L73 2696 aaPredicted RBP6.62□□□□□ -1.35
TNFAIP3-210ENST00000620204 DEFB116Q30KQ4 102 aa6.61□□□□□ -1.35
TNFAIP3-210ENST00000620204 PRO0255Q9UI72 69 aa6.61□□□□□ -1.35
TNFAIP3-210ENST00000620204 FSHBP01225 129 aa6.61□□□□□ -1.35
TNFAIP3-210ENST00000620204 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
TNFAIP3-210ENST00000620204 PLAC8L1A1L4L8 177 aa6.6□□□□□ -1.35
TNFAIP3-210ENST00000620204 C1orf64Q8NEQ6 169 aa6.6□□□□□ -1.35
TNFAIP3-210ENST00000620204 STAB1Q9NY15 2570 aa6.6□□□□□ -1.35
TNFAIP3-210ENST00000620204 GIG44P09565 113 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms