RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 FAM19A1Q7Z5A9 133 aa14.91□□□□□ -0.02
VEGFA-228ENST00000617771 Q8NDZ9 215 aa14.91□□□□□ -0.02
VEGFA-228ENST00000617771 TYMSOSQ8TAI1 123 aa14.91□□□□□ -0.02
VEGFA-228ENST00000617771 TMEM238C9JI98 176 aa14.9□□□□□ -0.02
VEGFA-228ENST00000617771 H0Y8G0 127 aa14.9□□□□□ -0.02
VEGFA-228ENST00000617771 ATP6V1G1O75348 118 aa14.9□□□□□ -0.02
VEGFA-228ENST00000617771 LEPROTL1O95214 131 aa14.9□□□□□ -0.02
VEGFA-228ENST00000617771 HERV-K104P63124 156 aa14.89□□□□□ -0.03
VEGFA-228ENST00000617771 PRLHP81277 87 aa14.89□□□□□ -0.03
VEGFA-228ENST00000617771 MEIG1Q5JSS6 88 aa14.89□□□□□ -0.03
VEGFA-228ENST00000617771 M0R378 163 aa14.88□□□□□ -0.03
VEGFA-228ENST00000617771 SERF1AO75920 110 aa14.88□□□□□ -0.03
VEGFA-228ENST00000617771 SMIM13P0DJ93 91 aa14.88□□□□□ -0.03
VEGFA-228ENST00000617771 LINC00587B1AMM8 73 aa14.87□□□□□ -0.03
VEGFA-228ENST00000617771 ANAPC11Q9NYG5 84 aa14.87□□□□□ -0.03
VEGFA-228ENST00000617771 PRR4Q16378 134 aa14.86□□□□□ -0.03
VEGFA-228ENST00000617771 FAM229BQ4G0N7 80 aa14.86□□□□□ -0.03
VEGFA-228ENST00000617771 SLC7A5P1Q8MH63 180 aa14.86□□□□□ -0.03
VEGFA-228ENST00000617771 LINC00310P59036 64 aa14.85□□□□□ -0.03
VEGFA-228ENST00000617771 NDUFA12Q9UI09 145 aa14.85□□□□□ -0.03
VEGFA-228ENST00000617771 HSPB8Q9UJY1 196 aa14.85□□□□□ -0.03
VEGFA-228ENST00000617771 LPAP08519 4548 aa14.85□□□□□ -0.03
VEGFA-228ENST00000617771 MYMXA0A1B0GTQ4 84 aa14.84□□□□□ -0.03
VEGFA-228ENST00000617771 TSPAN13O95857 204 aa14.83□□□□□ -0.04
VEGFA-228ENST00000617771 MIR7-3HGQ8N6C7 128 aa14.83□□□□□ -0.04
VEGFA-228ENST00000617771 PLNP26678 52 aa14.82□□□□□ -0.04
VEGFA-228ENST00000617771 BOD1L2Q8IYS8 172 aa14.82□□□□□ -0.04
VEGFA-228ENST00000617771 MAP1LC3CQ9BXW4 147 aa14.82□□□□□ -0.04
VEGFA-228ENST00000617771 KRTAP13-2Q52LG2 175 aa14.81□□□□□ -0.04
VEGFA-228ENST00000617771 COLCA2A8K830 154 aa14.8□□□□□ -0.04
VEGFA-228ENST00000617771 RNF213Q63HN8 5207 aa14.8□□□□□ -0.04
VEGFA-228ENST00000617771 LEPROTO15243 131 aa14.79□□□□□ -0.04
VEGFA-228ENST00000617771 FABP4P15090 132 aa14.79□□□□□ -0.04
VEGFA-228ENST00000617771 PLEKHB2Q96CS7 222 aa14.79□□□□□ -0.04
VEGFA-228ENST00000617771 IGKV2D-26A0A0A0MRZ7 120 aa14.78□□□□□ -0.04
VEGFA-228ENST00000617771 DPM2O94777 84 aa14.77□□□□□ -0.05
VEGFA-228ENST00000617771 HERVK_113P61574 105 aa14.77□□□□□ -0.05
VEGFA-228ENST00000617771 HIGD2AQ9BW72 106 aa14.77□□□□□ -0.05
VEGFA-228ENST00000617771 PRYO14603 147 aa14.76□□□□□ -0.05
VEGFA-228ENST00000617771 NCR3O14931 201 aa14.76□□□□□ -0.05
VEGFA-228ENST00000617771 TSPEAR-AS2P59090 65 aa14.76□□□□□ -0.05
VEGFA-228ENST00000617771 J3QQQ9 107 aa14.73□□□□□ -0.05
VEGFA-228ENST00000617771 IGKCP01834 107 aa14.73□□□□□ -0.05
VEGFA-228ENST00000617771 LINC00304Q8N9R0 145 aa14.73□□□□□ -0.05
VEGFA-228ENST00000617771 PMCHL2Q9BQD1 86 aa14.73□□□□□ -0.05
VEGFA-228ENST00000617771 NMUP48645 174 aa14.72□□□□□ -0.05
VEGFA-228ENST00000617771 KCNQ1DNQ9H478 68 aa14.71□□□□□ -0.05
VEGFA-228ENST00000617771 LGALS3P17931 250 aaKnown RBP14.7□□□□□ -0.06
VEGFA-228ENST00000617771 S100A12P80511 92 aa14.7□□□□□ -0.06
VEGFA-228ENST00000617771 LINC00337Q8N6G1 96 aa14.7□□□□□ -0.06
VEGFA-228ENST00000617771 ZNF706Q9Y5V0 76 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-228ENST00000617771 LOC107984156A0A0G2JMH3 177 aa14.68□□□□□ -0.06
VEGFA-228ENST00000617771 SPRR1AP35321 89 aa14.68□□□□□ -0.06
VEGFA-228ENST00000617771 ARL17AQ8IVW1 177 aa14.68□□□□□ -0.06
VEGFA-228ENST00000617771 DAND5Q8N907 189 aa14.68□□□□□ -0.06
VEGFA-228ENST00000617771 TRBV10-3A0A0K0K1G6 114 aa14.67□□□□□ -0.06
VEGFA-228ENST00000617771 ETDCA0A1B0GVM5 59 aa14.67□□□□□ -0.06
VEGFA-228ENST00000617771 SPRR4Q96PI1 79 aa14.67□□□□□ -0.06
VEGFA-228ENST00000617771 MIEN1Q9BRT3 115 aa14.66□□□□□ -0.06
VEGFA-228ENST00000617771 CTAG1AP78358 180 aa14.65□□□□□ -0.06
VEGFA-228ENST00000617771 TRBV10-2A0A0K0K1G8 114 aa14.64□□□□□ -0.07
VEGFA-228ENST00000617771 C3orf22Q8N5N4 141 aa14.63□□□□□ -0.07
VEGFA-228ENST00000617771 KRTAP4-16G5E9R7 235 aaPredicted RBP14.62□□□□□ -0.07
VEGFA-228ENST00000617771 DDTP30046 118 aa14.61□□□□□ -0.07
VEGFA-228ENST00000617771 SPANXB1Q9NS25 103 aaPredicted RBP14.61□□□□□ -0.07
VEGFA-228ENST00000617771 E9PLD3 99 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BKO60814 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BJP06899 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BOP23527 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BBP33778 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BDP58876 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BCP62807 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST2H2BEQ16778 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-228ENST00000617771 SMCR5Q8TEV8 140 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BHQ93079 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BNQ99877 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 HIST1H2BMQ99879 126 aa14.6□□□□□ -0.07
VEGFA-228ENST00000617771 SYS1-DBNDD2H3BUS1 97 aa14.58□□□□□ -0.08
VEGFA-228ENST00000617771 NDUFC2O95298 119 aa14.58□□□□□ -0.08
VEGFA-228ENST00000617771 RETNLBQ9BQ08 111 aa14.58□□□□□ -0.08
VEGFA-228ENST00000617771 A0A0J9YXY3 114 aa14.56□□□□□ -0.08
VEGFA-228ENST00000617771 S100A7L2Q5SY68 101 aa14.56□□□□□ -0.08
VEGFA-228ENST00000617771 SPAG11AQ6PDA7 123 aa14.56□□□□□ -0.08
VEGFA-228ENST00000617771 B5MCH6 92 aa14.55□□□□□ -0.08
VEGFA-228ENST00000617771 PPDPFQ9H3Y8 114 aa14.53□□□□□ -0.08
VEGFA-228ENST00000617771 IGLV6-57P01721 117 aa14.52□□□□□ -0.09
VEGFA-228ENST00000617771 NPC2P61916 151 aa14.52□□□□□ -0.09
VEGFA-228ENST00000617771 C4orf48Q5BLP8 95 aa14.52□□□□□ -0.09
VEGFA-228ENST00000617771 ADAMTSL4-AS1Q5T5F5 129 aa14.51□□□□□ -0.09
VEGFA-228ENST00000617771 LINC01545Q5VT33 79 aa14.51□□□□□ -0.09
VEGFA-228ENST00000617771 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
VEGFA-228ENST00000617771 SOSTDC1Q6X4U4 206 aa14.51□□□□□ -0.09
VEGFA-228ENST00000617771 LINC00483Q53H64 154 aa14.5□□□□□ -0.09
VEGFA-228ENST00000617771 Q6ZRX8 168 aa14.49□□□□□ -0.09
VEGFA-228ENST00000617771 TRAV23DV6A0A075B6W5 121 aa14.48□□□□□ -0.09
VEGFA-228ENST00000617771 GAGE2AQ6NT46 116 aa14.48□□□□□ -0.09
VEGFA-228ENST00000617771 IGLV7-46A0A075B6I9 117 aa14.47□□□□□ -0.09
VEGFA-228ENST00000617771 Q8NBF4 154 aa14.47□□□□□ -0.09
VEGFA-228ENST00000617771 EIF4EBP3O60516 100 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms