RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
TNFRSF11A-205ENST00000616710 COX7BP24311 80 aa9.78□□□□□ -0.84
TNFRSF11A-205ENST00000616710 HIGD2AQ9BW72 106 aa9.78□□□□□ -0.84
TNFRSF11A-205ENST00000616710 LINC00482Q8N8I6 264 aa9.78□□□□□ -0.84
TNFRSF11A-205ENST00000616710 NKAPP1Q8N9T2 125 aa9.78□□□□□ -0.84
TNFRSF11A-205ENST00000616710 FLNBO75369 2602 aaKnown RBP9.78□□□□□ -0.84
TNFRSF11A-205ENST00000616710 CHCHD10Q8WYQ3 142 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF11A-205ENST00000616710 UNC79Q9P2D8 2635 aa9.77□□□□□ -0.85
TNFRSF11A-205ENST00000616710 HECTD1Q9ULT8 2610 aa9.77□□□□□ -0.85
TNFRSF11A-205ENST00000616710 CCL24O00175 119 aa9.77□□□□□ -0.85
TNFRSF11A-205ENST00000616710 NDUFC1O43677 76 aa9.77□□□□□ -0.85
TNFRSF11A-205ENST00000616710 MRPL55Q7Z7F7 128 aaKnown RBP9.77□□□□□ -0.85
TNFRSF11A-205ENST00000616710 C6orf223Q8N319 242 aa9.77□□□□□ -0.85
TNFRSF11A-205ENST00000616710 CAMK2N2Q96S95 79 aa9.77□□□□□ -0.85
TNFRSF11A-205ENST00000616710 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
TNFRSF11A-205ENST00000616710 DEFB114Q30KQ6 69 aa9.76□□□□□ -0.85
TNFRSF11A-205ENST00000616710 FBXL19-AS1Q494R0 122 aa9.76□□□□□ -0.85
TNFRSF11A-205ENST00000616710 UNQ6190/PRO20217Q6UXQ8 127 aa9.76□□□□□ -0.85
TNFRSF11A-205ENST00000616710 C16orf74Q96GX8 76 aa9.76□□□□□ -0.85
TNFRSF11A-205ENST00000616710 PDE6GP18545 87 aa9.75□□□□□ -0.85
TNFRSF11A-205ENST00000616710 PMAIP1Q13794 54 aa9.75□□□□□ -0.85
TNFRSF11A-205ENST00000616710 ODF3L2Q3SX64 289 aa9.75□□□□□ -0.85
TNFRSF11A-205ENST00000616710 NIPBLQ6KC79 2804 aaeCLIP9.75□□□□□ -0.85
TNFRSF11A-205ENST00000616710 ZFHX3Q15911 3703 aa9.74□□□□□ -0.85
TNFRSF11A-205ENST00000616710 USP24Q9UPU5 2620 aa9.74□□□□□ -0.85
TNFRSF11A-205ENST00000616710 FAM229BQ4G0N7 80 aa9.74□□□□□ -0.85
TNFRSF11A-205ENST00000616710 UTP20O75691 2785 aaKnown RBP9.74□□□□□ -0.85
TNFRSF11A-205ENST00000616710 PRYO14603 147 aa9.73□□□□□ -0.85
TNFRSF11A-205ENST00000616710 REG3AQ06141 175 aa9.73□□□□□ -0.85
TNFRSF11A-205ENST00000616710 Q6ZQT0 140 aa9.73□□□□□ -0.85
TNFRSF11A-205ENST00000616710 ESRGQ1W209 222 aa9.72□□□□□ -0.85
TNFRSF11A-205ENST00000616710 LINC01006Q8NI28 216 aa9.72□□□□□ -0.85
TNFRSF11A-205ENST00000616710 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
TNFRSF11A-205ENST00000616710 SPATA3Q8NHX4 192 aa9.72□□□□□ -0.85
TNFRSF11A-205ENST00000616710 A0A0J9YWU9 116 aa9.71□□□□□ -0.86
TNFRSF11A-205ENST00000616710 F8WDY8 70 aa9.71□□□□□ -0.86
TNFRSF11A-205ENST00000616710 LINC00575Q6W349 94 aa9.71□□□□□ -0.86
TNFRSF11A-205ENST00000616710 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
TNFRSF11A-205ENST00000616710 KLKP1Q107X0 134 aa9.69□□□□□ -0.86
TNFRSF11A-205ENST00000616710 BBC3Q96PG8 261 aaPredicted RBP9.69□□□□□ -0.86
TNFRSF11A-205ENST00000616710 UBE2BP63146 152 aa9.69□□□□□ -0.86
TNFRSF11A-205ENST00000616710 WFDC13Q8IUB5 93 aa9.69□□□□□ -0.86
TNFRSF11A-205ENST00000616710 FLNAP21333 2647 aaKnown RBP9.69□□□□□ -0.86
TNFRSF11A-205ENST00000616710 CHKB-CPT1BH3BT56 60 aa9.69□□□□□ -0.86
TNFRSF11A-205ENST00000616710 CELSR2Q9HCU4 2923 aa9.68□□□□□ -0.86
TNFRSF11A-205ENST00000616710 ATP5EP56381 51 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF11A-205ENST00000616710 MP68P56378 58 aa9.68□□□□□ -0.86
TNFRSF11A-205ENST00000616710 DEFB116Q30KQ4 102 aa9.68□□□□□ -0.86
TNFRSF11A-205ENST00000616710 A0A096LNT2 108 aa9.67□□□□□ -0.86
TNFRSF11A-205ENST00000616710 WFDC10BQ8IUB3 73 aa9.67□□□□□ -0.86
TNFRSF11A-205ENST00000616710 IGKV2D-24A0A075B6R9 120 aa9.67□□□□□ -0.86
TNFRSF11A-205ENST00000616710 C10orf25Q5T742 122 aa9.67□□□□□ -0.86
TNFRSF11A-205ENST00000616710 DEFB135Q30KP9 77 aa9.67□□□□□ -0.86
TNFRSF11A-205ENST00000616710 OBSCN-AS1Q96MR7 158 aa9.67□□□□□ -0.86
TNFRSF11A-205ENST00000616710 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF11A-205ENST00000616710 KLK9Q2XQG4 91 aa9.66□□□□□ -0.86
TNFRSF11A-205ENST00000616710 PRO0255Q9UI72 69 aa9.66□□□□□ -0.86
TNFRSF11A-205ENST00000616710 Q8IZM0 81 aa9.66□□□□□ -0.86
TNFRSF11A-205ENST00000616710 ETDCA0A1B0GVM5 59 aa9.65□□□□□ -0.86
TNFRSF11A-205ENST00000616710 ITPR3Q14573 2671 aa9.65□□□□□ -0.86
TNFRSF11A-205ENST00000616710 CYSRT1A8MQ03 144 aa9.65□□□□□ -0.86
TNFRSF11A-205ENST00000616710 BSNQ9UPA5 3926 aa9.64□□□□□ -0.87
TNFRSF11A-205ENST00000616710 ZNF73O43830 326 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF11A-205ENST00000616710 ZNF702PQ9H963 129 aa9.63□□□□□ -0.87
TNFRSF11A-205ENST00000616710 A6NED7 52 aa9.63□□□□□ -0.87
TNFRSF11A-205ENST00000616710 MXRA5Q9NR99 2828 aa9.63□□□□□ -0.87
TNFRSF11A-205ENST00000616710 A0A096LNI7 61 aa9.63□□□□□ -0.87
TNFRSF11A-205ENST00000616710 CD164L2Q6UWJ8 174 aa9.62□□□□□ -0.87
TNFRSF11A-205ENST00000616710 SMIM29Q86T20 159 aa9.62□□□□□ -0.87
TNFRSF11A-205ENST00000616710 DSCR9P59020 149 aa9.61□□□□□ -0.87
TNFRSF11A-205ENST00000616710 BAHCC1Q9P281 2608 aa9.61□□□□□ -0.87
TNFRSF11A-205ENST00000616710 CXCL6P80162 114 aa9.6□□□□□ -0.87
TNFRSF11A-205ENST00000616710 C4orf3Q8WVX3 66 aa9.6□□□□□ -0.87
TNFRSF11A-205ENST00000616710 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11A-205ENST00000616710 IGSF10Q6WRI0 2623 aa9.6□□□□□ -0.87
TNFRSF11A-205ENST00000616710 NDUFS5O43920 106 aa9.59□□□□□ -0.87
TNFRSF11A-205ENST00000616710 DNAJC9-AS1A6NH13 148 aa9.58□□□□□ -0.88
TNFRSF11A-205ENST00000616710 C16orf95Q9H693 158 aa9.58□□□□□ -0.88
TNFRSF11A-205ENST00000616710 Q8NDZ9 215 aa9.57□□□□□ -0.88
TNFRSF11A-205ENST00000616710 LINC00208Q96KT6 92 aa9.57□□□□□ -0.88
TNFRSF11A-205ENST00000616710 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
TNFRSF11A-205ENST00000616710 PRR15LQ9BU68 103 aa9.57□□□□□ -0.88
TNFRSF11A-205ENST00000616710 LY6G6DO95868 133 aa9.56□□□□□ -0.88
TNFRSF11A-205ENST00000616710 ATRQ13535 2644 aa9.56□□□□□ -0.88
TNFRSF11A-205ENST00000616710 A8MUN3 132 aa9.56□□□□□ -0.88
TNFRSF11A-205ENST00000616710 TRBV7-4A0A0J9YYF1 115 aa9.55□□□□□ -0.88
TNFRSF11A-205ENST00000616710 H3BQ85 93 aa9.55□□□□□ -0.88
TNFRSF11A-205ENST00000616710 KRTAP10-9P60411 292 aa9.54□□□□□ -0.88
TNFRSF11A-205ENST00000616710 VPS13CQ709C8 3753 aa9.53□□□□□ -0.88
TNFRSF11A-205ENST00000616710 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.88
TNFRSF11A-205ENST00000616710 C1orf64Q8NEQ6 169 aa9.52□□□□□ -0.89
TNFRSF11A-205ENST00000616710 TEP1Q99973 2627 aaKnown RBP9.52□□□□□ -0.89
TNFRSF11A-205ENST00000616710 HELZ2Q9BYK8 2649 aaKnown RBP9.51□□□□□ -0.89
TNFRSF11A-205ENST00000616710 H0Y9J4 135 aa9.51□□□□□ -0.89
TNFRSF11A-205ENST00000616710 COX17Q14061 63 aa9.51□□□□□ -0.89
TNFRSF11A-205ENST00000616710 Q6YL49 198 aa9.51□□□□□ -0.89
TNFRSF11A-205ENST00000616710 PLAC8L1A1L4L8 177 aa9.51□□□□□ -0.89
TNFRSF11A-205ENST00000616710 UBR5O95071 2799 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF11A-205ENST00000616710 C1orf137Q5JT78 98 aa9.47□□□□□ -0.89
TNFRSF11A-205ENST00000616710 A0A0G2JQZ4 141 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms