RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 TET2Q6N021 2002 aaPredicted RBP4.7□□□□□ -1.66
CLCN3-211ENST00000613795 SPINK1P00995 79 aa4.7□□□□□ -1.66
CLCN3-211ENST00000613795 IGLV6-57P01721 117 aa4.7□□□□□ -1.66
CLCN3-211ENST00000613795 MOBPQ13875 183 aa4.7□□□□□ -1.66
CLCN3-211ENST00000613795 CIRBP-AS1Q8TBR5 109 aa4.7□□□□□ -1.66
CLCN3-211ENST00000613795 LINC00167Q96N53 147 aa4.7□□□□□ -1.66
CLCN3-211ENST00000613795 GVQW2A0A096LPI5 108 aaPredicted RBP4.69□□□□□ -1.66
CLCN3-211ENST00000613795 Q6ZRX8 168 aa4.69□□□□□ -1.66
CLCN3-211ENST00000613795 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
CLCN3-211ENST00000613795 C22orf24Q9Y442 160 aa4.69□□□□□ -1.66
CLCN3-211ENST00000613795 LINC00476Q8WZB0 136 aa4.69□□□□□ -1.66
CLCN3-211ENST00000613795 OBSCN-AS1Q96MR7 158 aa4.69□□□□□ -1.66
CLCN3-211ENST00000613795 CNOT1A5YKK6 2376 aaKnown RBP4.68□□□□□ -1.66
CLCN3-211ENST00000613795 SMR3AQ99954 134 aa4.68□□□□□ -1.66
CLCN3-211ENST00000613795 PCNX1Q96RV3 2341 aa4.68□□□□□ -1.66
CLCN3-211ENST00000613795 A8MWP4 228 aa4.68□□□□□ -1.66
CLCN3-211ENST00000613795 MIR22HGQ0VDD5 57 aa4.67□□□□□ -1.66
CLCN3-211ENST00000613795 MED13LQ71F56 2210 aa4.67□□□□□ -1.66
CLCN3-211ENST00000613795 K7EQZ3 153 aa4.67□□□□□ -1.66
CLCN3-211ENST00000613795 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
CLCN3-211ENST00000613795 PLA2G2DQ9UNK4 145 aa4.67□□□□□ -1.66
CLCN3-211ENST00000613795 PTPRBP23467 1997 aa4.66□□□□□ -1.66
CLCN3-211ENST00000613795 PRR26Q8N8Z3 221 aa4.66□□□□□ -1.66
CLCN3-211ENST00000613795 GPR179Q6PRD1 2367 aa4.65□□□□□ -1.66
CLCN3-211ENST00000613795 PRLHP81277 87 aa4.65□□□□□ -1.66
CLCN3-211ENST00000613795 IGKV2D-30A0A075B6S6 120 aa4.63□□□□□ -1.67
CLCN3-211ENST00000613795 C16orf90A8MZG2 172 aa4.63□□□□□ -1.67
CLCN3-211ENST00000613795 IGKV2-30P06310 120 aa4.63□□□□□ -1.67
CLCN3-211ENST00000613795 SORL1Q92673 2214 aa4.62□□□□□ -1.67
CLCN3-211ENST00000613795 Q75L30 129 aa4.62□□□□□ -1.67
CLCN3-211ENST00000613795 ANKHD1Q8IWZ3 2542 aaKnown RBP4.62□□□□□ -1.67
CLCN3-211ENST00000613795 Q6ZRP5 223 aa4.61□□□□□ -1.67
CLCN3-211ENST00000613795 FP248Q71RG6 208 aaPredicted RBP4.61□□□□□ -1.67
CLCN3-211ENST00000613795 SSBP3-AS1Q7Z2R9 100 aa4.61□□□□□ -1.67
CLCN3-211ENST00000613795 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
CLCN3-211ENST00000613795 RPL37AP61513 92 aaKnown RBP4.61□□□□□ -1.67
CLCN3-211ENST00000613795 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
CLCN3-211ENST00000613795 LINC01554Q52M75 96 aa4.61□□□□□ -1.67
CLCN3-211ENST00000613795 DNAH10OSP0CZ25 163 aa4.6□□□□□ -1.67
CLCN3-211ENST00000613795 KCNQ1DNQ9H478 68 aa4.6□□□□□ -1.67
CLCN3-211ENST00000613795 NBDYA0A0U1RRE5 68 aa4.6□□□□□ -1.67
CLCN3-211ENST00000613795 C9orf129Q5T035 196 aaKnown RBP4.6□□□□□ -1.67
CLCN3-211ENST00000613795 HIVEP2P31629 2446 aa4.6□□□□□ -1.67
CLCN3-211ENST00000613795 Q8NAQ8 132 aa4.6□□□□□ -1.67
CLCN3-211ENST00000613795 ST20-AS1Q8NBB2 130 aa4.59□□□□□ -1.67
CLCN3-211ENST00000613795 EPM2AB3EWF7 344 aa4.59□□□□□ -1.67
CLCN3-211ENST00000613795 WNK1Q9H4A3 2382 aa4.59□□□□□ -1.67
CLCN3-211ENST00000613795 RTL8CO15255 209 aa4.58□□□□□ -1.68
CLCN3-211ENST00000613795 IGLV8-61A0A075B6I0 122 aa4.57□□□□□ -1.68
CLCN3-211ENST00000613795 LINC00313P59037 77 aa4.57□□□□□ -1.68
CLCN3-211ENST00000613795 PLA2G1BP04054 148 aaKnown RBP4.57□□□□□ -1.68
CLCN3-211ENST00000613795 COL27A1Q8IZC6 1860 aaPredicted RBP4.56□□□□□ -1.68
CLCN3-211ENST00000613795 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
CLCN3-211ENST00000613795 WWC2-AS2Q96NR7 200 aa4.56□□□□□ -1.68
CLCN3-211ENST00000613795 C8orf17Q9NRJ1 99 aa4.56□□□□□ -1.68
CLCN3-211ENST00000613795 KRTAP24-1Q3LI83 254 aa4.56□□□□□ -1.68
CLCN3-211ENST00000613795 IGFL1Q6UW32 110 aa4.56□□□□□ -1.68
CLCN3-211ENST00000613795 Q8N377 158 aa4.56□□□□□ -1.68
CLCN3-211ENST00000613795 C2CD3Q4AC94 2353 aa4.55□□□□□ -1.68
CLCN3-211ENST00000613795 RIF1Q5UIP0 2472 aaKnown RBP4.55□□□□□ -1.68
CLCN3-211ENST00000613795 IGLV1-50A0A075B6I6 118 aa4.55□□□□□ -1.68
CLCN3-211ENST00000613795 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
CLCN3-211ENST00000613795 LINC00588Q9Y4M8 146 aa4.55□□□□□ -1.68
CLCN3-211ENST00000613795 NBASA2RRP1 2371 aa4.54□□□□□ -1.68
CLCN3-211ENST00000613795 FAM229BQ4G0N7 80 aa4.54□□□□□ -1.68
CLCN3-211ENST00000613795 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
CLCN3-211ENST00000613795 TLX1NBP0CAT3 122 aa4.54□□□□□ -1.68
CLCN3-211ENST00000613795 TYMSOSQ8TAI1 123 aa4.54□□□□□ -1.68
CLCN3-211ENST00000613795 OXTP01178 125 aa4.53□□□□□ -1.68
CLCN3-211ENST00000613795 C19orf73Q9NVV2 129 aa4.53□□□□□ -1.68
CLCN3-211ENST00000613795 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
CLCN3-211ENST00000613795 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
CLCN3-211ENST00000613795 A0A1B0GVX0 72 aa4.53□□□□□ -1.68
CLCN3-211ENST00000613795 LINC00612Q8N6U2 182 aa4.53□□□□□ -1.68
CLCN3-211ENST00000613795 CSNK1G2-AS1Q8NCQ2 148 aa4.53□□□□□ -1.68
CLCN3-211ENST00000613795 IGLV5-48A0A075B6I7 105 aa4.52□□□□□ -1.69
CLCN3-211ENST00000613795 PHF5AQ7RTV0 110 aaKnown RBP4.52□□□□□ -1.69
CLCN3-211ENST00000613795 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
CLCN3-211ENST00000613795 MUC6Q6W4X9 2439 aa4.52□□□□□ -1.69
CLCN3-211ENST00000613795 PCSK5Q92824 1860 aa4.51□□□□□ -1.69
CLCN3-211ENST00000613795 Q5VV11 94 aa4.51□□□□□ -1.69
CLCN3-211ENST00000613795 A0A1W2PNM2 257 aa4.51□□□□□ -1.69
CLCN3-211ENST00000613795 PRR34Q9NV39 138 aa4.51□□□□□ -1.69
CLCN3-211ENST00000613795 SPACA4Q8TDM5 124 aa4.51□□□□□ -1.69
CLCN3-211ENST00000613795 ASB16-AS1Q495Z4 193 aa4.49□□□□□ -1.69
CLCN3-211ENST00000613795 CSPG4Q6UVK1 2322 aa4.49□□□□□ -1.69
CLCN3-211ENST00000613795 A0A096LNT2 108 aa4.49□□□□□ -1.69
CLCN3-211ENST00000613795 OTOGLQ3ZCN5 2332 aa4.48□□□□□ -1.69
CLCN3-211ENST00000613795 C15orf56Q8N910 161 aa4.48□□□□□ -1.69
CLCN3-211ENST00000613795 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
CLCN3-211ENST00000613795 SPRR4Q96PI1 79 aa4.47□□□□□ -1.69
CLCN3-211ENST00000613795 ZFHX2Q9C0A1 2572 aaPredicted RBP4.47□□□□□ -1.69
CLCN3-211ENST00000613795 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
CLCN3-211ENST00000613795 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
CLCN3-211ENST00000613795 DSCR10P59022 87 aa4.46□□□□□ -1.69
CLCN3-211ENST00000613795 ZNF575Q86XF7 245 aa4.46□□□□□ -1.69
CLCN3-211ENST00000613795 C9orf163Q8N9P6 203 aa4.46□□□□□ -1.7
CLCN3-211ENST00000613795 ZNF861PO60384 105 aa4.45□□□□□ -1.7
CLCN3-211ENST00000613795 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
CLCN3-211ENST00000613795 Q96NJ1 140 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms