RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 KRTAP19-2Q3LHN2 52 aa13.07□□□□□ -0.32
MMP28-203ENST00000612672 UQCC3Q6UW78 93 aa13.07□□□□□ -0.32
MMP28-203ENST00000612672 MRPL18Q9H0U6 180 aaKnown RBP13.07□□□□□ -0.32
MMP28-203ENST00000612672 TMEM218A2RU14 115 aa13.06□□□□□ -0.32
MMP28-203ENST00000612672 MT-ND4LP03901 98 aa13.06□□□□□ -0.32
MMP28-203ENST00000612672 RPL24P83731 157 aaKnown RBP13.06□□□□□ -0.32
MMP28-203ENST00000612672 C4orf48Q5BLP8 95 aa13.05□□□□□ -0.32
MMP28-203ENST00000612672 H3BRM9 83 aa13.04□□□□□ -0.32
MMP28-203ENST00000612672 IGLC3P0DOY3 106 aa13.04□□□□□ -0.32
MMP28-203ENST00000612672 ZNF22P17026 224 aaPredicted RBP13.04□□□□□ -0.32
MMP28-203ENST00000612672 COMMD7Q86VX2 200 aa13.04□□□□□ -0.32
MMP28-203ENST00000612672 COX17Q14061 63 aa13□□□□□ -0.33
MMP28-203ENST00000612672 SPINK1P00995 79 aa12.99□□□□□ -0.33
MMP28-203ENST00000612672 XP32Q5T750 250 aa12.98□□□□□ -0.33
MMP28-203ENST00000612672 Q8N377 158 aa12.98□□□□□ -0.33
MMP28-203ENST00000612672 SEC11CQ9BY50 192 aa12.98□□□□□ -0.33
MMP28-203ENST00000612672 ZNF706Q9Y5V0 76 aaPredicted RBP12.98□□□□□ -0.33
MMP28-203ENST00000612672 A0A096LNJ9 63 aa12.97□□□□□ -0.33
MMP28-203ENST00000612672 MT1HP80294 61 aa12.97□□□□□ -0.33
MMP28-203ENST00000612672 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
MMP28-203ENST00000612672 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
MMP28-203ENST00000612672 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
MMP28-203ENST00000612672 LINC00483Q53H64 154 aa12.95□□□□□ -0.34
MMP28-203ENST00000612672 SPRR1AP35321 89 aa12.94□□□□□ -0.34
MMP28-203ENST00000612672 C10orf91Q5T1B1 145 aa12.94□□□□□ -0.34
MMP28-203ENST00000612672 A0A0U1RRA0 63 aa12.93□□□□□ -0.34
MMP28-203ENST00000612672 C11orf86A6NJI1 115 aa12.92□□□□□ -0.34
MMP28-203ENST00000612672 PRYO14603 147 aa12.92□□□□□ -0.34
MMP28-203ENST00000612672 NDUFA6P56556 154 aa12.92□□□□□ -0.34
MMP28-203ENST00000612672 MOBPQ13875 183 aa12.91□□□□□ -0.34
MMP28-203ENST00000612672 FA2HQ7L5A8 372 aa12.9□□□□□ -0.34
MMP28-203ENST00000612672 NCR3O14931 201 aa12.89□□□□□ -0.35
MMP28-203ENST00000612672 ERC2-IT1O76042 136 aa12.89□□□□□ -0.35
MMP28-203ENST00000612672 LINC00158P58513 81 aa12.89□□□□□ -0.35
MMP28-203ENST00000612672 URB1-AS1Q96HZ7 61 aa12.89□□□□□ -0.35
MMP28-203ENST00000612672 IGLV9-49A0A0B4J1Y8 123 aa12.88□□□□□ -0.35
MMP28-203ENST00000612672 GAGE2AQ6NT46 116 aa12.88□□□□□ -0.35
MMP28-203ENST00000612672 KCNQ1DNQ9H478 68 aa12.88□□□□□ -0.35
MMP28-203ENST00000612672 FLGP20930 4061 aaPredicted RBP12.87□□□□□ -0.35
MMP28-203ENST00000612672 RPS29P62273 56 aaKnown RBP12.87□□□□□ -0.35
MMP28-203ENST00000612672 SMCO4Q9NRQ5 59 aa12.87□□□□□ -0.35
MMP28-203ENST00000612672 NDUFA12Q9UI09 145 aa12.87□□□□□ -0.35
MMP28-203ENST00000612672 TRAV9-1A0A075B6T8 112 aa12.86□□□□□ -0.35
MMP28-203ENST00000612672 LORP23490 312 aaPredicted RBP12.85□□□□□ -0.35
MMP28-203ENST00000612672 RPS10P5Q9NQ39 176 aa12.85□□□□□ -0.35
MMP28-203ENST00000612672 PMCHL1Q16048 86 aa12.84□□□□□ -0.35
MMP28-203ENST00000612672 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
MMP28-203ENST00000612672 FAM19A2Q8N3H0 131 aa12.84□□□□□ -0.35
MMP28-203ENST00000612672 TRBV10-3A0A0K0K1G6 114 aa12.83□□□□□ -0.36
MMP28-203ENST00000612672 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.36
MMP28-203ENST00000612672 SMIM13P0DJ93 91 aa12.83□□□□□ -0.36
MMP28-203ENST00000612672 S100PP25815 95 aa12.83□□□□□ -0.36
MMP28-203ENST00000612672 RHEBQ15382 184 aa12.83□□□□□ -0.36
MMP28-203ENST00000612672 BOD1L2Q8IYS8 172 aa12.83□□□□□ -0.36
MMP28-203ENST00000612672 SFTA2Q6UW10 78 aa12.82□□□□□ -0.36
MMP28-203ENST00000612672 B5MCH6 92 aa12.81□□□□□ -0.36
MMP28-203ENST00000612672 SLC25A20O43772 301 aa12.81□□□□□ -0.36
MMP28-203ENST00000612672 KRTAP10-6P60371 365 aaPredicted RBP12.8□□□□□ -0.36
MMP28-203ENST00000612672 SSBP3-AS1Q7Z2R9 100 aa12.8□□□□□ -0.36
MMP28-203ENST00000612672 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
MMP28-203ENST00000612672 Q9BRP9 147 aa12.8□□□□□ -0.36
MMP28-203ENST00000612672 APOC3P02656 99 aa12.79□□□□□ -0.36
MMP28-203ENST00000612672 FABP9Q0Z7S8 132 aa12.78□□□□□ -0.36
MMP28-203ENST00000612672 PCOTHQ58A44 107 aa12.78□□□□□ -0.36
MMP28-203ENST00000612672 MIR7-3HGQ8N6C7 128 aa12.78□□□□□ -0.36
MMP28-203ENST00000612672 HBDP02042 147 aa12.77□□□□□ -0.37
MMP28-203ENST00000612672 TMEM223A0PJW6 202 aa12.76□□□□□ -0.37
MMP28-203ENST00000612672 CFC1BP0CG36 223 aa12.76□□□□□ -0.37
MMP28-203ENST00000612672 C18orf32Q8TCD1 76 aa12.75□□□□□ -0.37
MMP28-203ENST00000612672 IGLV8-61A0A075B6I0 122 aa12.73□□□□□ -0.37
MMP28-203ENST00000612672 SNAPINO95295 136 aa12.72□□□□□ -0.37
MMP28-203ENST00000612672 COX19Q49B96 90 aa12.72□□□□□ -0.37
MMP28-203ENST00000612672 SVBPQ8N300 66 aa12.72□□□□□ -0.37
MMP28-203ENST00000612672 CHTOPQ9Y3Y2 248 aaKnown RBP12.72□□□□□ -0.37
MMP28-203ENST00000612672 LINC00614P0C842 121 aa12.71□□□□□ -0.37
MMP28-203ENST00000612672 MEIG1Q5JSS6 88 aa12.71□□□□□ -0.37
MMP28-203ENST00000612672 NDUFA5Q16718 116 aa12.7□□□□□ -0.38
MMP28-203ENST00000612672 C9orf153Q5TBE3 101 aa12.68□□□□□ -0.38
MMP28-203ENST00000612672 Q6ZRX8 168 aa12.68□□□□□ -0.38
MMP28-203ENST00000612672 C9orf92A6NGG3 77 aa12.67□□□□□ -0.38
MMP28-203ENST00000612672 ATP6V1G1O75348 118 aa12.67□□□□□ -0.38
MMP28-203ENST00000612672 YPEL4Q96NS1 127 aa12.67□□□□□ -0.38
MMP28-203ENST00000612672 TRAPPC1Q9Y5R8 145 aa12.67□□□□□ -0.38
MMP28-203ENST00000612672 DDTP30046 118 aa12.65□□□□□ -0.38
MMP28-203ENST00000612672 SLC7A5P1Q8MH63 180 aa12.65□□□□□ -0.38
MMP28-203ENST00000612672 ST20-AS1Q8NBB2 130 aa12.65□□□□□ -0.38
MMP28-203ENST00000612672 TSPEAR-AS2P59090 65 aa12.62□□□□□ -0.39
MMP28-203ENST00000612672 HERV-K104P63124 156 aa12.61□□□□□ -0.39
MMP28-203ENST00000612672 TRAV12-1A0A0B4J245 112 aa12.6□□□□□ -0.39
MMP28-203ENST00000612672 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
MMP28-203ENST00000612672 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
MMP28-203ENST00000612672 TRBV10-2A0A0K0K1G8 114 aa12.58□□□□□ -0.4
MMP28-203ENST00000612672 S100A12P80511 92 aa12.57□□□□□ -0.4
MMP28-203ENST00000612672 HRCT1Q6UXD1 115 aa12.57□□□□□ -0.4
MMP28-203ENST00000612672 IGLV6-57P01721 117 aa12.56□□□□□ -0.4
MMP28-203ENST00000612672 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
MMP28-203ENST00000612672 MYMXA0A1B0GTQ4 84 aa12.54□□□□□ -0.4
MMP28-203ENST00000612672 SSPOA2VEC9 5147 aa12.54□□□□□ -0.4
MMP28-203ENST00000612672 M0R2T5 61 aa12.53□□□□□ -0.4
MMP28-203ENST00000612672 SPANXB1Q9NS25 103 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms