RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 COX17Q14061 63 aa8.22□□□□□ -1.09
TP53-220ENST00000610623 STHQ8IWL8 128 aa8.22□□□□□ -1.09
TP53-220ENST00000610623 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.09
TP53-220ENST00000610623 CMC4P56277 68 aaPredicted RBP8.21□□□□□ -1.09
TP53-220ENST00000610623 C9orf66Q5T8R8 295 aa8.21□□□□□ -1.09
TP53-220ENST00000610623 C6orf99Q4VX62 202 aa8.21□□□□□ -1.1
TP53-220ENST00000610623 Q8N3U1 123 aa8.21□□□□□ -1.1
TP53-220ENST00000610623 LAMTOR3Q9UHA4 124 aa8.21□□□□□ -1.1
TP53-220ENST00000610623 MIFP14174 115 aa8.2□□□□□ -1.1
TP53-220ENST00000610623 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
TP53-220ENST00000610623 C11orf68Q9H3H3 251 aaKnown RBP8.2□□□□□ -1.1
TP53-220ENST00000610623 NOP10Q9NPE3 64 aaKnown RBP8.2□□□□□ -1.1
TP53-220ENST00000610623 PDZD2O15018 2839 aa8.2□□□□□ -1.1
TP53-220ENST00000610623 LOC100131303A0A0U1RQF7 123 aa8.2□□□□□ -1.1
TP53-220ENST00000610623 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
TP53-220ENST00000610623 LINC00474Q9P2X8 69 aa8.2□□□□□ -1.1
TP53-220ENST00000610623 TRGV2A0A075B6R0 118 aa8.19□□□□□ -1.1
TP53-220ENST00000610623 ODF3L2Q3SX64 289 aa8.19□□□□□ -1.1
TP53-220ENST00000610623 BRK1Q8WUW1 75 aa8.18□□□□□ -1.1
TP53-220ENST00000610623 TM2D3Q9BRN9 247 aa8.18□□□□□ -1.1
TP53-220ENST00000610623 FLNAP21333 2647 aaKnown RBP8.18□□□□□ -1.1
TP53-220ENST00000610623 CHD6Q8TD26 2715 aa8.18□□□□□ -1.1
TP53-220ENST00000610623 M0R2N4 97 aa8.18□□□□□ -1.1
TP53-220ENST00000610623 TRGV4A0A0C4DH28 118 aa8.17□□□□□ -1.1
TP53-220ENST00000610623 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
TP53-220ENST00000610623 C16orf74Q96GX8 76 aa8.17□□□□□ -1.1
TP53-220ENST00000610623 V9GYY9 64 aa8.17□□□□□ -1.1
TP53-220ENST00000610623 NREPQ16612 68 aa8.15□□□□□ -1.1
TP53-220ENST00000610623 TMEM254Q8TBM7 123 aa8.15□□□□□ -1.1
TP53-220ENST00000610623 IGHV4-28A0A0C4DH34 117 aa8.15□□□□□ -1.1
TP53-220ENST00000610623 A0A1B0GUV1 79 aa8.15□□□□□ -1.1
TP53-220ENST00000610623 PLAC8L1A1L4L8 177 aa8.14□□□□□ -1.11
TP53-220ENST00000610623 MUC7Q8TAX7 377 aa8.14□□□□□ -1.11
TP53-220ENST00000610623 MYO9AB2RTY4 2548 aa8.14□□□□□ -1.11
TP53-220ENST00000610623 IGLV1-51P01701 117 aa8.14□□□□□ -1.11
TP53-220ENST00000610623 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
TP53-220ENST00000610623 TLN2Q9Y4G6 2542 aa8.13□□□□□ -1.11
TP53-220ENST00000610623 BPY2O14599 106 aa8.13□□□□□ -1.11
TP53-220ENST00000610623 SPATA3Q8NHX4 192 aa8.13□□□□□ -1.11
TP53-220ENST00000610623 C2CD3Q4AC94 2353 aa8.12□□□□□ -1.11
TP53-220ENST00000610623 CCDC168Q8NDH2 2452 aa8.12□□□□□ -1.11
TP53-220ENST00000610623 Q6ZQY7 126 aa8.12□□□□□ -1.11
TP53-220ENST00000610623 SONP18583 2426 aaKnown RBP8.11□□□□□ -1.11
TP53-220ENST00000610623 SEC61GP60059 68 aa8.11□□□□□ -1.11
TP53-220ENST00000610623 ANK3Q12955 4377 aaKnown RBP8.11□□□□□ -1.11
TP53-220ENST00000610623 ZNF469Q96JG9 3925 aaPredicted RBP8.11□□□□□ -1.11
TP53-220ENST00000610623 NBPF19A0A087WUL8 3843 aa8.11□□□□□ -1.11
TP53-220ENST00000610623 A0A0U1RQV1 116 aa8.11□□□□□ -1.11
TP53-220ENST00000610623 SMR3AQ99954 134 aa8.11□□□□□ -1.11
TP53-220ENST00000610623 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
TP53-220ENST00000610623 ESRGQ1W209 222 aa8.1□□□□□ -1.11
TP53-220ENST00000610623 UNC79Q9P2D8 2635 aa8.09□□□□□ -1.11
TP53-220ENST00000610623 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
TP53-220ENST00000610623 Q8NDZ9 215 aa8.09□□□□□ -1.11
TP53-220ENST00000610623 AKAP9Q99996 3911 aa8.09□□□□□ -1.11
TP53-220ENST00000610623 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.11
TP53-220ENST00000610623 FAM229BQ4G0N7 80 aa8.09□□□□□ -1.11
TP53-220ENST00000610623 HELZ2Q9BYK8 2649 aaKnown RBP8.09□□□□□ -1.11
TP53-220ENST00000610623 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.08□□□□□ -1.12
TP53-220ENST00000610623 SCXQ7RTU7 201 aa8.08□□□□□ -1.12
TP53-220ENST00000610623 MPLKIPQ8TAP9 179 aa8.08□□□□□ -1.12
TP53-220ENST00000610623 FUSP35637 526 aaKnown RBP eCLIP8.08□□□□□ -1.12
TP53-220ENST00000610623 C9orf116Q5BN46 136 aaPredicted RBP8.07□□□□□ -1.12
TP53-220ENST00000610623 OCR1Q9BZK8 76 aa8.07□□□□□ -1.12
TP53-220ENST00000610623 KRTAP10-3P60369 221 aa8.06□□□□□ -1.12
TP53-220ENST00000610623 Q6ZTC4 211 aa8.06□□□□□ -1.12
TP53-220ENST00000610623 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
TP53-220ENST00000610623 ITPR2Q14571 2701 aa8.06□□□□□ -1.12
TP53-220ENST00000610623 COX7BP24311 80 aa8.05□□□□□ -1.12
TP53-220ENST00000610623 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
TP53-220ENST00000610623 DIRC1Q969H9 104 aa8.04□□□□□ -1.12
TP53-220ENST00000610623 CSNK1G2-AS1Q8NCQ2 148 aa8.04□□□□□ -1.12
TP53-220ENST00000610623 CHCHD10Q8WYQ3 142 aaPredicted RBP8.04□□□□□ -1.12
TP53-220ENST00000610623 ACANP16112 2415 aa8.04□□□□□ -1.12
TP53-220ENST00000610623 INAFM1C9JVW0 142 aa8.03□□□□□ -1.12
TP53-220ENST00000610623 WFDC10AQ9H1F0 79 aa8.03□□□□□ -1.12
TP53-220ENST00000610623 IGKV4-1P06312 121 aa8.03□□□□□ -1.12
TP53-220ENST00000610623 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
TP53-220ENST00000610623 IGHV4-30-4P0DP06 118 aa8.02□□□□□ -1.13
TP53-220ENST00000610623 PRR15Q8IV56 129 aa8.02□□□□□ -1.13
TP53-220ENST00000610623 WNK1Q9H4A3 2382 aa8.02□□□□□ -1.13
TP53-220ENST00000610623 HIVEP2P31629 2446 aa8.02□□□□□ -1.13
TP53-220ENST00000610623 NOTCH3Q9UM47 2321 aa8.02□□□□□ -1.13
TP53-220ENST00000610623 FASNP49327 2511 aaKnown RBP8.01□□□□□ -1.13
TP53-220ENST00000610623 ELOF1P60002 83 aaKnown RBP8□□□□□ -1.13
TP53-220ENST00000610623 GCN1Q92616 2671 aaKnown RBP8□□□□□ -1.13
TP53-220ENST00000610623 ZNF73O43830 326 aaPredicted RBP8□□□□□ -1.13
TP53-220ENST00000610623 REG3AQ06141 175 aa7.99□□□□□ -1.13
TP53-220ENST00000610623 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
TP53-220ENST00000610623 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
TP53-220ENST00000610623 HIGD2AQ9BW72 106 aa7.99□□□□□ -1.13
TP53-220ENST00000610623 NF1P21359 2839 aa7.99□□□□□ -1.13
TP53-220ENST00000610623 hDV103S1A0JD37 113 aa7.98□□□□□ -1.13
TP53-220ENST00000610623 Q1T7F1 81 aa7.98□□□□□ -1.13
TP53-220ENST00000610623 C10orf25Q5T742 122 aa7.98□□□□□ -1.13
TP53-220ENST00000610623 Q8N9L7 120 aa7.98□□□□□ -1.13
TP53-220ENST00000610623 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
TP53-220ENST00000610623 DEFB130BP0DP73 79 aa7.98□□□□□ -1.13
TP53-220ENST00000610623 DEFB130AP0DP74 79 aa7.98□□□□□ -1.13
TP53-220ENST00000610623 SPAG11BQ08648 103 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms