RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TMEM238C9JI98 176 aa8.71□□□□□ -1.02
HDDC2-204ENST00000608295 ATP6V1G1O75348 118 aa8.71□□□□□ -1.02
HDDC2-204ENST00000608295 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.02
HDDC2-204ENST00000608295 UBE2AP49459 152 aa8.71□□□□□ -1.02
HDDC2-204ENST00000608295 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 PRLHP81277 87 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 COX17Q14061 63 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
HDDC2-204ENST00000608295 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
HDDC2-204ENST00000608295 NCR3O14931 201 aa8.69□□□□□ -1.02
HDDC2-204ENST00000608295 DPM2O94777 84 aa8.69□□□□□ -1.02
HDDC2-204ENST00000608295 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
HDDC2-204ENST00000608295 MIR7-3HGQ8N6C7 128 aa8.69□□□□□ -1.02
HDDC2-204ENST00000608295 DAND5Q8N907 189 aa8.69□□□□□ -1.02
HDDC2-204ENST00000608295 PLNP26678 52 aa8.68□□□□□ -1.02
HDDC2-204ENST00000608295 RPL24P83731 157 aaKnown RBP8.68□□□□□ -1.02
HDDC2-204ENST00000608295 FAM19A1Q7Z5A9 133 aa8.68□□□□□ -1.02
HDDC2-204ENST00000608295 IGKCP01834 107 aa8.67□□□□□ -1.02
HDDC2-204ENST00000608295 HERVK_113P61574 105 aa8.67□□□□□ -1.02
HDDC2-204ENST00000608295 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
HDDC2-204ENST00000608295 MAP1LC3CQ9BXW4 147 aa8.67□□□□□ -1.02
HDDC2-204ENST00000608295 ANAPC11Q9NYG5 84 aa8.67□□□□□ -1.02
HDDC2-204ENST00000608295 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
HDDC2-204ENST00000608295 LEPROTO15243 131 aa8.66□□□□□ -1.02
HDDC2-204ENST00000608295 TMEM126AQ9H061 195 aa8.66□□□□□ -1.02
HDDC2-204ENST00000608295 IGLV1-50A0A075B6I6 118 aa8.65□□□□□ -1.02
HDDC2-204ENST00000608295 J3QQQ9 107 aa8.65□□□□□ -1.02
HDDC2-204ENST00000608295 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
HDDC2-204ENST00000608295 HERV-K104P63124 156 aa8.65□□□□□ -1.02
HDDC2-204ENST00000608295 PLEKHB2Q96CS7 222 aa8.65□□□□□ -1.02
HDDC2-204ENST00000608295 A0A087X002 238 aa8.63□□□□□ -1.03
HDDC2-204ENST00000608295 M0R378 163 aa8.63□□□□□ -1.03
HDDC2-204ENST00000608295 NPC2P61916 151 aa8.63□□□□□ -1.03
HDDC2-204ENST00000608295 UBR4Q5T4S7 5183 aa8.63□□□□□ -1.03
HDDC2-204ENST00000608295 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
HDDC2-204ENST00000608295 SYS1-DBNDD2H3BUS1 97 aa8.61□□□□□ -1.03
HDDC2-204ENST00000608295 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
HDDC2-204ENST00000608295 RPL13AP40429 203 aaKnown RBP8.6□□□□□ -1.03
HDDC2-204ENST00000608295 KRTDAPP60985 99 aa8.59□□□□□ -1.03
HDDC2-204ENST00000608295 TSPAN13O95857 204 aa8.58□□□□□ -1.04
HDDC2-204ENST00000608295 MIEN1Q9BRT3 115 aa8.58□□□□□ -1.04
HDDC2-204ENST00000608295 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
HDDC2-204ENST00000608295 LINC00587B1AMM8 73 aa8.57□□□□□ -1.04
HDDC2-204ENST00000608295 C3orf79P0CE67 100 aa8.57□□□□□ -1.04
HDDC2-204ENST00000608295 CRYGAP11844 174 aa8.57□□□□□ -1.04
HDDC2-204ENST00000608295 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
HDDC2-204ENST00000608295 TTTY13Q9BZ97 58 aa8.57□□□□□ -1.04
HDDC2-204ENST00000608295 LRP2P98164 4655 aa8.56□□□□□ -1.04
HDDC2-204ENST00000608295 E9PLD3 99 aa8.56□□□□□ -1.04
HDDC2-204ENST00000608295 NMUP48645 174 aa8.56□□□□□ -1.04
HDDC2-204ENST00000608295 LINC01545Q5VT33 79 aa8.56□□□□□ -1.04
HDDC2-204ENST00000608295 A0A0J9YXY3 114 aa8.55□□□□□ -1.04
HDDC2-204ENST00000608295 PRYO14603 147 aa8.55□□□□□ -1.04
HDDC2-204ENST00000608295 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
HDDC2-204ENST00000608295 KRTAP13-2Q52LG2 175 aa8.55□□□□□ -1.04
HDDC2-204ENST00000608295 PET117Q6UWS5 81 aa8.55□□□□□ -1.04
HDDC2-204ENST00000608295 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
HDDC2-204ENST00000608295 SOSTDC1Q6X4U4 206 aa8.54□□□□□ -1.04
HDDC2-204ENST00000608295 ATOH7Q8N100 152 aa8.54□□□□□ -1.04
HDDC2-204ENST00000608295 ETDCA0A1B0GVM5 59 aa8.53□□□□□ -1.04
HDDC2-204ENST00000608295 ADAMTSL4-AS1Q5T5F5 129 aa8.53□□□□□ -1.04
HDDC2-204ENST00000608295 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
HDDC2-204ENST00000608295 DDTP30046 118 aa8.52□□□□□ -1.05
HDDC2-204ENST00000608295 PRR4Q16378 134 aa8.52□□□□□ -1.05
HDDC2-204ENST00000608295 COA6Q5JTJ3 125 aaKnown RBP8.51□□□□□ -1.05
HDDC2-204ENST00000608295 C3orf22Q8N5N4 141 aa8.51□□□□□ -1.05
HDDC2-204ENST00000608295 SPANXB1Q9NS25 103 aaPredicted RBP8.51□□□□□ -1.05
HDDC2-204ENST00000608295 S100A7L2Q5SY68 101 aa8.5□□□□□ -1.05
HDDC2-204ENST00000608295 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
HDDC2-204ENST00000608295 KCNQ1DNQ9H478 68 aa8.5□□□□□ -1.05
HDDC2-204ENST00000608295 LPAP08519 4548 aa8.5□□□□□ -1.05
HDDC2-204ENST00000608295 C20orf202A1L168 122 aa8.48□□□□□ -1.05
HDDC2-204ENST00000608295 SPRR1AP35321 89 aa8.48□□□□□ -1.05
HDDC2-204ENST00000608295 S100A12P80511 92 aa8.48□□□□□ -1.05
HDDC2-204ENST00000608295 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
HDDC2-204ENST00000608295 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
HDDC2-204ENST00000608295 SMCR5Q8TEV8 140 aa8.48□□□□□ -1.05
HDDC2-204ENST00000608295 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
HDDC2-204ENST00000608295 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
HDDC2-204ENST00000608295 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
HDDC2-204ENST00000608295 LITAFQ99732 161 aa8.47□□□□□ -1.05
HDDC2-204ENST00000608295 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
HDDC2-204ENST00000608295 TRBV10-2A0A0K0K1G8 114 aa8.46□□□□□ -1.06
HDDC2-204ENST00000608295 KRTAP4-16G5E9R7 235 aaPredicted RBP8.46□□□□□ -1.06
HDDC2-204ENST00000608295 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
HDDC2-204ENST00000608295 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.06
HDDC2-204ENST00000608295 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
HDDC2-204ENST00000608295 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
HDDC2-204ENST00000608295 B5MCH6 92 aa8.45□□□□□ -1.06
HDDC2-204ENST00000608295 ERC2-IT1O76042 136 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms