RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 COX17Q14061 63 aa8.29□□□□□ -1.08
CTSA-213ENST00000606782 ANKRD39Q53RE8 183 aa8.29□□□□□ -1.08
CTSA-213ENST00000606782 GAGE2BQ13066 116 aa8.28□□□□□ -1.08
CTSA-213ENST00000606782 SRSF9Q13242 221 aaKnown RBP eCLIP8.28□□□□□ -1.08
CTSA-213ENST00000606782 SPINK6Q6UWN8 80 aa8.28□□□□□ -1.08
CTSA-213ENST00000606782 TNXBP22105 4242 aa8.27□□□□□ -1.08
CTSA-213ENST00000606782 ERG28Q9UKR5 140 aa8.27□□□□□ -1.09
CTSA-213ENST00000606782 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
CTSA-213ENST00000606782 PFN2P35080 140 aa8.26□□□□□ -1.09
CTSA-213ENST00000606782 RPL18AQ02543 176 aaKnown RBP8.26□□□□□ -1.09
CTSA-213ENST00000606782 PYY3Q5JQD4 70 aa8.26□□□□□ -1.09
CTSA-213ENST00000606782 A0A1W2PNN7 141 aa8.25□□□□□ -1.09
CTSA-213ENST00000606782 HSBP1L1C9JCN9 74 aa8.25□□□□□ -1.09
CTSA-213ENST00000606782 GAGE2EQ4V326 116 aa8.25□□□□□ -1.09
CTSA-213ENST00000606782 GAGE2DQ9UEU5 116 aa8.25□□□□□ -1.09
CTSA-213ENST00000606782 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
CTSA-213ENST00000606782 SMIM13P0DJ93 91 aa8.24□□□□□ -1.09
CTSA-213ENST00000606782 LINC00158P58513 81 aa8.24□□□□□ -1.09
CTSA-213ENST00000606782 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
CTSA-213ENST00000606782 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
CTSA-213ENST00000606782 TTTY13Q9BZ97 58 aa8.24□□□□□ -1.09
CTSA-213ENST00000606782 PCP2Q8IVA1 136 aa8.23□□□□□ -1.09
CTSA-213ENST00000606782 ZNF815PA8K554 130 aa8.22□□□□□ -1.09
CTSA-213ENST00000606782 MEIG1Q5JSS6 88 aa8.22□□□□□ -1.09
CTSA-213ENST00000606782 REG3GQ6UW15 175 aa8.22□□□□□ -1.09
CTSA-213ENST00000606782 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
CTSA-213ENST00000606782 A0A0U1RRA0 63 aa8.21□□□□□ -1.1
CTSA-213ENST00000606782 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
CTSA-213ENST00000606782 SND1-IT1Q9HBX3 110 aa8.21□□□□□ -1.1
CTSA-213ENST00000606782 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
CTSA-213ENST00000606782 LOC105371267A0A1B0GV96 52 aa8.2□□□□□ -1.1
CTSA-213ENST00000606782 TIMM17BO60830 172 aa8.2□□□□□ -1.1
CTSA-213ENST00000606782 ADAMTSL4-AS1Q5T5F5 129 aa8.2□□□□□ -1.1
CTSA-213ENST00000606782 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
CTSA-213ENST00000606782 MIR7-3HGQ8N6C7 128 aa8.2□□□□□ -1.1
CTSA-213ENST00000606782 UBR4Q5T4S7 5183 aa8.19□□□□□ -1.1
CTSA-213ENST00000606782 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
CTSA-213ENST00000606782 LITAFQ99732 161 aa8.19□□□□□ -1.1
CTSA-213ENST00000606782 VAMP8Q9BV40 100 aa8.19□□□□□ -1.1
CTSA-213ENST00000606782 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
CTSA-213ENST00000606782 DLEU1O43261 78 aa8.18□□□□□ -1.1
CTSA-213ENST00000606782 COX8AP10176 69 aa8.18□□□□□ -1.1
CTSA-213ENST00000606782 SPATA45Q537H7 98 aa8.18□□□□□ -1.1
CTSA-213ENST00000606782 BOD1L2Q8IYS8 172 aa8.18□□□□□ -1.1
CTSA-213ENST00000606782 PAM16Q9Y3D7 125 aa8.18□□□□□ -1.1
CTSA-213ENST00000606782 PHF5AQ7RTV0 110 aaKnown RBP8.16□□□□□ -1.1
CTSA-213ENST00000606782 DAND5Q8N907 189 aa8.16□□□□□ -1.1
CTSA-213ENST00000606782 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
CTSA-213ENST00000606782 SCGB1D4Q6XE38 83 aa8.15□□□□□ -1.1
CTSA-213ENST00000606782 C14orf144Q96I85 54 aa8.15□□□□□ -1.1
CTSA-213ENST00000606782 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
CTSA-213ENST00000606782 VPREB1P12018 145 aa8.14□□□□□ -1.11
CTSA-213ENST00000606782 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
CTSA-213ENST00000606782 FAM19A5Q7Z5A7 132 aaPredicted RBP8.14□□□□□ -1.11
CTSA-213ENST00000606782 Q8NDZ9 215 aa8.14□□□□□ -1.11
CTSA-213ENST00000606782 SPANXDQ9BXN6 97 aa8.14□□□□□ -1.11
CTSA-213ENST00000606782 SPANXCQ9NY87 97 aa8.14□□□□□ -1.11
CTSA-213ENST00000606782 TP73-AS1Q9UF72 201 aa8.14□□□□□ -1.11
CTSA-213ENST00000606782 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
CTSA-213ENST00000606782 IGLV7-43P04211 117 aa8.13□□□□□ -1.11
CTSA-213ENST00000606782 C1orf137Q5JT78 98 aa8.13□□□□□ -1.11
CTSA-213ENST00000606782 SOSTDC1Q6X4U4 206 aa8.13□□□□□ -1.11
CTSA-213ENST00000606782 LINC00308Q8TCZ7 52 aa8.13□□□□□ -1.11
CTSA-213ENST00000606782 TMEM238C9JI98 176 aa8.12□□□□□ -1.11
CTSA-213ENST00000606782 S100A12P80511 92 aa8.12□□□□□ -1.11
CTSA-213ENST00000606782 Q6ZVH6 145 aa8.12□□□□□ -1.11
CTSA-213ENST00000606782 KRTAP11-1Q8IUC1 163 aa8.12□□□□□ -1.11
CTSA-213ENST00000606782 M0QXV9 152 aa8.11□□□□□ -1.11
CTSA-213ENST00000606782 LBHQ53QV2 105 aaPredicted RBP8.11□□□□□ -1.11
CTSA-213ENST00000606782 SLC25A34Q6PIV7 304 aa8.11□□□□□ -1.11
CTSA-213ENST00000606782 PPDPFQ9H3Y8 114 aa8.11□□□□□ -1.11
CTSA-213ENST00000606782 SPANXB1Q9NS25 103 aaPredicted RBP8.11□□□□□ -1.11
CTSA-213ENST00000606782 NDUFC2O95298 119 aa8.1□□□□□ -1.11
CTSA-213ENST00000606782 SMIM6P0DI80 62 aa8.1□□□□□ -1.11
CTSA-213ENST00000606782 IFITM1P13164 125 aa8.1□□□□□ -1.11
CTSA-213ENST00000606782 LRP2P98164 4655 aa8.1□□□□□ -1.11
CTSA-213ENST00000606782 MRPL55Q7Z7F7 128 aaKnown RBP8.1□□□□□ -1.11
CTSA-213ENST00000606782 DIRC1Q969H9 104 aa8.1□□□□□ -1.11
CTSA-213ENST00000606782 LINC00167Q96N53 147 aa8.1□□□□□ -1.11
CTSA-213ENST00000606782 NPC2P61916 151 aa8.09□□□□□ -1.11
CTSA-213ENST00000606782 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
CTSA-213ENST00000606782 NKAPP1Q8N9T2 125 aa8.09□□□□□ -1.11
CTSA-213ENST00000606782 MIEN1Q9BRT3 115 aa8.09□□□□□ -1.11
CTSA-213ENST00000606782 HIGD1BQ9P298 99 aa8.09□□□□□ -1.11
CTSA-213ENST00000606782 M0R378 163 aa8.08□□□□□ -1.12
CTSA-213ENST00000606782 COPS9Q8WXC6 57 aa8.08□□□□□ -1.12
CTSA-213ENST00000606782 TRBV10-2A0A0K0K1G8 114 aa8.07□□□□□ -1.12
CTSA-213ENST00000606782 H0Y9J4 135 aa8.07□□□□□ -1.12
CTSA-213ENST00000606782 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
CTSA-213ENST00000606782 IGLV1-50A0A075B6I6 118 aa8.06□□□□□ -1.12
CTSA-213ENST00000606782 GAGE10A6NGK3 116 aa8.05□□□□□ -1.12
CTSA-213ENST00000606782 UBE2BP63146 152 aa8.05□□□□□ -1.12
CTSA-213ENST00000606782 RPL37AP8A6NKH3 93 aa8.04□□□□□ -1.12
CTSA-213ENST00000606782 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
CTSA-213ENST00000606782 LINC00518Q8N0U6 118 aa8.04□□□□□ -1.12
CTSA-213ENST00000606782 UQCR10Q9UDW1 63 aa8.04□□□□□ -1.12
CTSA-213ENST00000606782 IGKV2-28A0A075B6P5 120 aa8.03□□□□□ -1.12
CTSA-213ENST00000606782 NCR3O14931 201 aa8.03□□□□□ -1.12
CTSA-213ENST00000606782 IGKV2D-28P01615 120 aa8.03□□□□□ -1.12
CTSA-213ENST00000606782 PRR26Q8N8Z3 221 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms