RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 PRR3P79522 188 aaKnown RBP13.27□□□□□ -0.29
MMP28-201ENST00000605424 C2orf48Q96LS8 159 aa13.27□□□□□ -0.29
MMP28-201ENST00000605424 C6orf48Q9UBA6 75 aa13.27□□□□□ -0.29
MMP28-201ENST00000605424 PRB2P02812 416 aaPredicted RBP13.26□□□□□ -0.29
MMP28-201ENST00000605424 XGP55808 180 aa13.26□□□□□ -0.29
MMP28-201ENST00000605424 Q9HAA7 133 aa13.26□□□□□ -0.29
MMP28-201ENST00000605424 CAMK2N2Q96S95 79 aa13.24□□□□□ -0.29
MMP28-201ENST00000605424 C22orf24Q9Y442 160 aa13.24□□□□□ -0.29
MMP28-201ENST00000605424 LECT2O14960 151 aa13.23□□□□□ -0.29
MMP28-201ENST00000605424 ACYP1P07311 99 aa13.23□□□□□ -0.29
MMP28-201ENST00000605424 S100A7L2Q5SY68 101 aa13.23□□□□□ -0.29
MMP28-201ENST00000605424 MT-ATP8P03928 68 aa13.23□□□□□ -0.29
MMP28-201ENST00000605424 INAFM2P0DMQ5 153 aa13.23□□□□□ -0.29
MMP28-201ENST00000605424 C15orf56Q8N910 161 aa13.22□□□□□ -0.29
MMP28-201ENST00000605424 Q8NDZ9 215 aa13.22□□□□□ -0.29
MMP28-201ENST00000605424 NCR3O14931 201 aa13.21□□□□□ -0.29
MMP28-201ENST00000605424 SNCGO76070 127 aa13.21□□□□□ -0.3
MMP28-201ENST00000605424 HIGD2BQ4VC39 106 aa13.21□□□□□ -0.3
MMP28-201ENST00000605424 LINC00167Q96N53 147 aa13.21□□□□□ -0.3
MMP28-201ENST00000605424 TENM3Q9P273 2699 aa13.21□□□□□ -0.3
MMP28-201ENST00000605424 MEGF8Q7Z7M0 2845 aa13.2□□□□□ -0.3
MMP28-201ENST00000605424 MRAPQ8TCY5 172 aa13.2□□□□□ -0.3
MMP28-201ENST00000605424 IGKV2D-24A0A075B6R9 120 aa13.19□□□□□ -0.3
MMP28-201ENST00000605424 IGLV6-57P01721 117 aa13.19□□□□□ -0.3
MMP28-201ENST00000605424 ORMDL1Q9P0S3 153 aa13.19□□□□□ -0.3
MMP28-201ENST00000605424 Q8N814 137 aa13.17□□□□□ -0.3
MMP28-201ENST00000605424 LINC00588Q9Y4M8 146 aa13.17□□□□□ -0.3
MMP28-201ENST00000605424 Q6ZRU5 148 aa13.17□□□□□ -0.3
MMP28-201ENST00000605424 PRKDCP78527 4128 aaKnown RBP13.16□□□□□ -0.3
MMP28-201ENST00000605424 C6orf99Q4VX62 202 aa13.16□□□□□ -0.3
MMP28-201ENST00000605424 NDUFC2-KCTD14E9PQ53 114 aa13.15□□□□□ -0.3
MMP28-201ENST00000605424 OBSCN-AS1Q96MR7 158 aa13.15□□□□□ -0.3
MMP28-201ENST00000605424 RPL18AQ02543 176 aaKnown RBP13.15□□□□□ -0.3
MMP28-201ENST00000605424 UPK3BQ9BT76 320 aa13.13□□□□□ -0.31
MMP28-201ENST00000605424 XAGE1AQ9HD64 81 aa13.13□□□□□ -0.31
MMP28-201ENST00000605424 RMI2Q96E14 147 aa13.12□□□□□ -0.31
MMP28-201ENST00000605424 TMEM256-PLSCR3K7ERE1 68 aa13.11□□□□□ -0.31
MMP28-201ENST00000605424 SYCNQ0VAF6 134 aa13.11□□□□□ -0.31
MMP28-201ENST00000605424 LINC00575Q6W349 94 aa13.11□□□□□ -0.31
MMP28-201ENST00000605424 DNAH9Q9NYC9 4486 aa13.1□□□□□ -0.31
MMP28-201ENST00000605424 SLPIP03973 132 aa13.1□□□□□ -0.31
MMP28-201ENST00000605424 VPREB1P12018 145 aa13.1□□□□□ -0.31
MMP28-201ENST00000605424 Q6Q795 121 aa13.1□□□□□ -0.31
MMP28-201ENST00000605424 TRAV23DV6A0A075B6W5 121 aa13.08□□□□□ -0.32
MMP28-201ENST00000605424 TRBV10-3A0A0K0K1G6 114 aa13.08□□□□□ -0.32
MMP28-201ENST00000605424 M0R378 163 aa13.08□□□□□ -0.32
MMP28-201ENST00000605424 HUWE1Q7Z6Z7 4374 aaKnown RBP13.07□□□□□ -0.32
MMP28-201ENST00000605424 hADV29S1A0JD25 119 aa13.07□□□□□ -0.32
MMP28-201ENST00000605424 JMJD7-PLA2G4BH0Y9G9 81 aa13.07□□□□□ -0.32
MMP28-201ENST00000605424 GAGE2BQ13066 116 aa13.07□□□□□ -0.32
MMP28-201ENST00000605424 GAGE2EQ4V326 116 aa13.07□□□□□ -0.32
MMP28-201ENST00000605424 SDIM1Q6ZPB5 146 aa13.07□□□□□ -0.32
MMP28-201ENST00000605424 GAGE2DQ9UEU5 116 aa13.07□□□□□ -0.32
MMP28-201ENST00000605424 TRBV7-6A0A0J9YX20 115 aa13.06□□□□□ -0.32
MMP28-201ENST00000605424 H3BQ85 93 aa13.06□□□□□ -0.32
MMP28-201ENST00000605424 DIRC1Q969H9 104 aa13.06□□□□□ -0.32
MMP28-201ENST00000605424 TLX1NBP0CAT3 122 aa13.05□□□□□ -0.32
MMP28-201ENST00000605424 Q6ZRP5 223 aa13.05□□□□□ -0.32
MMP28-201ENST00000605424 C9orf129Q5T035 196 aaKnown RBP13.04□□□□□ -0.32
MMP28-201ENST00000605424 GAGE2AQ6NT46 116 aa13.04□□□□□ -0.32
MMP28-201ENST00000605424 COL7A1Q02388 2944 aa13.04□□□□□ -0.32
MMP28-201ENST00000605424 ZNF73O43830 326 aaPredicted RBP13.03□□□□□ -0.32
MMP28-201ENST00000605424 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
MMP28-201ENST00000605424 LINC00643Q86TS7 51 aa13.03□□□□□ -0.32
MMP28-201ENST00000605424 C14orf132Q9NPU4 83 aa13.03□□□□□ -0.32
MMP28-201ENST00000605424 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
MMP28-201ENST00000605424 TRBV7-7A0A0K0K1E9 115 aa13□□□□□ -0.33
MMP28-201ENST00000605424 B9D2Q9BPU9 175 aa13□□□□□ -0.33
MMP28-201ENST00000605424 FBN3Q75N90 2809 aa13□□□□□ -0.33
MMP28-201ENST00000605424 A0A1B0GV72 72 aa13□□□□□ -0.33
MMP28-201ENST00000605424 GHRHP01286 108 aa13□□□□□ -0.33
MMP28-201ENST00000605424 IMUPQ9GZP8 106 aa13□□□□□ -0.33
MMP28-201ENST00000605424 COX7BP24311 80 aa12.99□□□□□ -0.33
MMP28-201ENST00000605424 ELOF1P60002 83 aaKnown RBP12.99□□□□□ -0.33
MMP28-201ENST00000605424 PLA2G2DQ9UNK4 145 aa12.99□□□□□ -0.33
MMP28-201ENST00000605424 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
MMP28-201ENST00000605424 CCKP06307 115 aa12.96□□□□□ -0.33
MMP28-201ENST00000605424 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.96□□□□□ -0.34
MMP28-201ENST00000605424 NKAPP1Q8N9T2 125 aa12.94□□□□□ -0.34
MMP28-201ENST00000605424 CASC10Q5T4H9 136 aa12.94□□□□□ -0.34
MMP28-201ENST00000605424 Q6ZQY7 126 aa12.93□□□□□ -0.34
MMP28-201ENST00000605424 APLNQ9ULZ1 77 aa12.92□□□□□ -0.34
MMP28-201ENST00000605424 IGLV5-37A0A075B6J1 123 aa12.92□□□□□ -0.34
MMP28-201ENST00000605424 KCNQ1DNQ9H478 68 aa12.91□□□□□ -0.34
MMP28-201ENST00000605424 NDUFV3P56181 108 aaKnown RBP12.9□□□□□ -0.35
MMP28-201ENST00000605424 RBM3P98179 157 aaKnown RBP12.9□□□□□ -0.35
MMP28-201ENST00000605424 LINC00528Q8N1L1 170 aa12.9□□□□□ -0.35
MMP28-201ENST00000605424 NHLRC4P0CG21 123 aaPredicted RBP12.89□□□□□ -0.35
MMP28-201ENST00000605424 SERTAD4-AS1Q5TG53 156 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 ANAPC13Q9BS18 74 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 LAMTOR3Q9UHA4 124 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 DNAH1Q9P2D7 4330 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 STAB2Q8WWQ8 2551 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 UBE2DNLQ8IWF7 75 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 C7orf33Q8WU49 177 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 TGP01266 2768 aa12.88□□□□□ -0.35
MMP28-201ENST00000605424 LOC110117498A0A087WWA1 95 aa12.87□□□□□ -0.35
MMP28-201ENST00000605424 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
MMP28-201ENST00000605424 PDE6GP18545 87 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms