RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 WNK1Q9H4A3 2382 aa4.85□□□□□ -1.63
TUBE1-207ENST00000604689 ZNF462Q96JM2 2506 aa4.85□□□□□ -1.63
TUBE1-207ENST00000604689 Q6ZQT0 140 aa4.85□□□□□ -1.63
TUBE1-207ENST00000604689 RPL36ALQ969Q0 106 aaKnown RBP4.85□□□□□ -1.63
TUBE1-207ENST00000604689 LITAFQ99732 161 aa4.85□□□□□ -1.63
TUBE1-207ENST00000604689 ZFAND2AQ8N6M9 145 aa4.84□□□□□ -1.63
TUBE1-207ENST00000604689 SETD2Q9BYW2 2564 aaPredicted RBP4.84□□□□□ -1.63
TUBE1-207ENST00000604689 FAM215AQ9Y5M1 114 aa4.84□□□□□ -1.63
TUBE1-207ENST00000604689 ANK2Q01484 3957 aa4.84□□□□□ -1.63
TUBE1-207ENST00000604689 SMIM1B2RUZ4 78 aa4.84□□□□□ -1.63
TUBE1-207ENST00000604689 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
TUBE1-207ENST00000604689 TTC28Q96AY4 2481 aa4.84□□□□□ -1.63
TUBE1-207ENST00000604689 LINC00315P59091 139 aa4.84□□□□□ -1.64
TUBE1-207ENST00000604689 LINC00208Q96KT6 92 aa4.84□□□□□ -1.64
TUBE1-207ENST00000604689 Q6ZTI0 123 aa4.83□□□□□ -1.64
TUBE1-207ENST00000604689 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
TUBE1-207ENST00000604689 IGHV3-11P01762 117 aa4.83□□□□□ -1.64
TUBE1-207ENST00000604689 POLR2KP53803 58 aaKnown RBP4.83□□□□□ -1.64
TUBE1-207ENST00000604689 CELSR2Q9HCU4 2923 aa4.82□□□□□ -1.64
TUBE1-207ENST00000604689 TRBV6-5A0A0K0K1A5 114 aa4.82□□□□□ -1.64
TUBE1-207ENST00000604689 DEFB109BQ30KR1 87 aa4.82□□□□□ -1.64
TUBE1-207ENST00000604689 WFDC10AQ9H1F0 79 aa4.82□□□□□ -1.64
TUBE1-207ENST00000604689 IGLV4-3A0A075B6K6 122 aa4.82□□□□□ -1.64
TUBE1-207ENST00000604689 Q8N9P0 234 aaPredicted RBP4.82□□□□□ -1.64
TUBE1-207ENST00000604689 C22orf24Q9Y442 160 aa4.82□□□□□ -1.64
TUBE1-207ENST00000604689 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.81□□□□□ -1.64
TUBE1-207ENST00000604689 IGHV7-81A0A0B4J1V7 117 aa4.81□□□□□ -1.64
TUBE1-207ENST00000604689 IGKV2-29A2NJV5 120 aaPredicted RBP4.81□□□□□ -1.64
TUBE1-207ENST00000604689 PLA2G2AP14555 144 aa4.81□□□□□ -1.64
TUBE1-207ENST00000604689 JMJD1CQ15652 2540 aa4.81□□□□□ -1.64
TUBE1-207ENST00000604689 JMJD7-PLA2G4BH0Y9G9 81 aa4.81□□□□□ -1.64
TUBE1-207ENST00000604689 CDC42SE2Q9NRR3 84 aa4.81□□□□□ -1.64
TUBE1-207ENST00000604689 ZFHX2Q9C0A1 2572 aaPredicted RBP4.81□□□□□ -1.64
TUBE1-207ENST00000604689 NIPBLQ6KC79 2804 aaeCLIP4.8□□□□□ -1.64
TUBE1-207ENST00000604689 ITPR1Q14643 2758 aa4.8□□□□□ -1.64
TUBE1-207ENST00000604689 Q8N9L7 120 aa4.79□□□□□ -1.64
TUBE1-207ENST00000604689 CDKN2A-AS1Q9UH64 79 aa4.79□□□□□ -1.64
TUBE1-207ENST00000604689 A0A0J9YX75 114 aa4.79□□□□□ -1.64
TUBE1-207ENST00000604689 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
TUBE1-207ENST00000604689 FAM104AQ969W3 186 aa4.79□□□□□ -1.64
TUBE1-207ENST00000604689 DEFB113Q30KQ7 82 aa4.78□□□□□ -1.64
TUBE1-207ENST00000604689 TMEM190Q8WZ59 177 aa4.78□□□□□ -1.64
TUBE1-207ENST00000604689 M0QY20 66 aa4.78□□□□□ -1.64
TUBE1-207ENST00000604689 COX6A2Q02221 97 aa4.78□□□□□ -1.64
TUBE1-207ENST00000604689 Q8NBF4 154 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 LINC01560Q8TB33 94 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 PKD1L2Q7Z442 2459 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 ZANQ9Y493 2812 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 A0A087WYN8 130 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 SPINK7P58062 85 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 SPINK13Q1W4C9 94 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 Q8N9W7 124 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 PTPN13Q12923 2485 aa4.77□□□□□ -1.65
TUBE1-207ENST00000604689 FN1P02751 2386 aaKnown RBP4.76□□□□□ -1.65
TUBE1-207ENST00000604689 FBN2P35556 2912 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 NDUFA4O00483 81 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 LINC00308Q8TCZ7 52 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 CENPEQ02224 2701 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 IGKV3OR2-268A0A0C4DH90 116 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 Q6ZR54 194 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 NPBQ8NG41 125 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 CAMK2N2Q96S95 79 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 OTOGLQ3ZCN5 2332 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
TUBE1-207ENST00000604689 MYO9AB2RTY4 2548 aa4.76□□□□□ -1.65
TUBE1-207ENST00000604689 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
TUBE1-207ENST00000604689 KAAG1Q9UBP8 84 aa4.75□□□□□ -1.65
TUBE1-207ENST00000604689 AKAP9Q99996 3911 aa4.75□□□□□ -1.65
TUBE1-207ENST00000604689 A6NDX4 124 aa4.75□□□□□ -1.65
TUBE1-207ENST00000604689 NDUFB1O75438 58 aa4.75□□□□□ -1.65
TUBE1-207ENST00000604689 EGFEM1PQ0D2K5 195 aa4.75□□□□□ -1.65
TUBE1-207ENST00000604689 TLN2Q9Y4G6 2542 aa4.74□□□□□ -1.65
TUBE1-207ENST00000604689 H0YGX0 51 aa4.74□□□□□ -1.65
TUBE1-207ENST00000604689 LINC00467Q9BRT7 94 aa4.74□□□□□ -1.65
TUBE1-207ENST00000604689 IGHV4-30-2A0A087WSY4 118 aa4.74□□□□□ -1.65
TUBE1-207ENST00000604689 CYSRT1A8MQ03 144 aa4.73□□□□□ -1.65
TUBE1-207ENST00000604689 DSCR9P59020 149 aa4.73□□□□□ -1.65
TUBE1-207ENST00000604689 LY6EQ16553 131 aa4.73□□□□□ -1.65
TUBE1-207ENST00000604689 USP9YO00507 2555 aaPredicted RBP4.73□□□□□ -1.65
TUBE1-207ENST00000604689 TOMM7Q9P0U1 55 aa4.73□□□□□ -1.65
TUBE1-207ENST00000604689 RNF5Q99942 180 aa4.73□□□□□ -1.65
TUBE1-207ENST00000604689 RHPN1-AS1Q9BWJ2 59 aa4.73□□□□□ -1.65
TUBE1-207ENST00000604689 IGF2RP11717 2491 aa4.72□□□□□ -1.65
TUBE1-207ENST00000604689 CSNK1G2-AS1Q8NCQ2 148 aa4.72□□□□□ -1.65
TUBE1-207ENST00000604689 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
TUBE1-207ENST00000604689 LINC00167Q96N53 147 aa4.72□□□□□ -1.65
TUBE1-207ENST00000604689 ZFYVE26Q68DK2 2539 aa4.72□□□□□ -1.65
TUBE1-207ENST00000604689 BRD3OSQ6XYD6 125 aa4.71□□□□□ -1.65
TUBE1-207ENST00000604689 SMIM29Q86T20 159 aa4.71□□□□□ -1.65
TUBE1-207ENST00000604689 CHD6Q8TD26 2715 aa4.71□□□□□ -1.66
TUBE1-207ENST00000604689 APCP25054 2843 aa4.71□□□□□ -1.66
TUBE1-207ENST00000604689 POLQO75417 2590 aa4.71□□□□□ -1.66
TUBE1-207ENST00000604689 LINC01006Q8NI28 216 aa4.71□□□□□ -1.66
TUBE1-207ENST00000604689 XAGE1AQ9HD64 81 aa4.7□□□□□ -1.66
TUBE1-207ENST00000604689 NAV2Q8IVL1 2488 aa4.7□□□□□ -1.66
TUBE1-207ENST00000604689 A0A087X002 238 aa4.7□□□□□ -1.66
TUBE1-207ENST00000604689 C10orf99Q6UWK7 81 aa4.7□□□□□ -1.66
TUBE1-207ENST00000604689 SMIM11BQ8TCY0 68 aa4.7□□□□□ -1.66
TUBE1-207ENST00000604689 CR1P17927 2039 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms