RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 MT1HL1P0DM35 61 aa3.59□□□□□ -1.83
FOCAD-213ENST00000604254 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
FOCAD-213ENST00000604254 LBHQ53QV2 105 aaPredicted RBP3.59□□□□□ -1.83
FOCAD-213ENST00000604254 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
FOCAD-213ENST00000604254 DIRC1Q969H9 104 aa3.59□□□□□ -1.83
FOCAD-213ENST00000604254 LINC01600Q96MT4 127 aa3.59□□□□□ -1.83
FOCAD-213ENST00000604254 CHTOPQ9Y3Y2 248 aaKnown RBP3.59□□□□□ -1.83
FOCAD-213ENST00000604254 IGLV5-39A0A0G2JS06 123 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 H0Y8G0 127 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 PFN2P35080 140 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 SFTA2Q6UW10 78 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 MRPL55Q7Z7F7 128 aaKnown RBP3.58□□□□□ -1.84
FOCAD-213ENST00000604254 KRTAP11-1Q8IUC1 163 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 NKAPP1Q8N9T2 125 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 IFI27L1Q96BM0 104 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 C22orf24Q9Y442 160 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 TNXBP22105 4242 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 LRP2P98164 4655 aa3.58□□□□□ -1.84
FOCAD-213ENST00000604254 TRAV12-1A0A0B4J245 112 aa3.57□□□□□ -1.84
FOCAD-213ENST00000604254 H0Y9J4 135 aa3.57□□□□□ -1.84
FOCAD-213ENST00000604254 NUPR1O60356 82 aa3.57□□□□□ -1.84
FOCAD-213ENST00000604254 SERF1AO75920 110 aa3.57□□□□□ -1.84
FOCAD-213ENST00000604254 FAM19A2Q8N3H0 131 aa3.57□□□□□ -1.84
FOCAD-213ENST00000604254 ZNF625Q96I27 306 aaPredicted RBP3.57□□□□□ -1.84
FOCAD-213ENST00000604254 TP73-AS1Q9UF72 201 aa3.57□□□□□ -1.84
FOCAD-213ENST00000604254 ERG28Q9UKR5 140 aa3.57□□□□□ -1.84
FOCAD-213ENST00000604254 TMEM223A0PJW6 202 aa3.56□□□□□ -1.84
FOCAD-213ENST00000604254 GAGE10A6NGK3 116 aa3.56□□□□□ -1.84
FOCAD-213ENST00000604254 LEPROTL1O95214 131 aa3.56□□□□□ -1.84
FOCAD-213ENST00000604254 COX17Q14061 63 aa3.56□□□□□ -1.84
FOCAD-213ENST00000604254 IGLV5-37A0A075B6J1 123 aa3.55□□□□□ -1.84
FOCAD-213ENST00000604254 RPL37AP8A6NKH3 93 aa3.55□□□□□ -1.84
FOCAD-213ENST00000604254 LINC00158P58513 81 aa3.55□□□□□ -1.84
FOCAD-213ENST00000604254 LINC00167Q96N53 147 aa3.55□□□□□ -1.84
FOCAD-213ENST00000604254 SND1-IT1Q9HBX3 110 aa3.55□□□□□ -1.84
FOCAD-213ENST00000604254 HSPB8Q9UJY1 196 aa3.55□□□□□ -1.84
FOCAD-213ENST00000604254 IGKV2-28A0A075B6P5 120 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 A0A0U1RRA0 63 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 COLCA2A8K830 154 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 ZNF861PO60384 105 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 BCE1O60756 84 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 IGKV2D-28P01615 120 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 FABP4P15090 132 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 PLNP26678 52 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 RPL28P46779 137 aaKnown RBP3.54□□□□□ -1.84
FOCAD-213ENST00000604254 UBE2AP49459 152 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 KRTAP10-8P60410 259 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 RPL24P83731 157 aaKnown RBP3.54□□□□□ -1.84
FOCAD-213ENST00000604254 MEIG1Q5JSS6 88 aa3.54□□□□□ -1.84
FOCAD-213ENST00000604254 IGLV1-50A0A075B6I6 118 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 SCO1O75880 301 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 DPM2O94777 84 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 VPREB1P12018 145 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 HERVK_113P61574 105 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 HERV-K104P63124 156 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 MAP1LC3CQ9BXW4 147 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
FOCAD-213ENST00000604254 MYMXA0A1B0GTQ4 84 aa3.52□□□□□ -1.85
FOCAD-213ENST00000604254 LINC00587B1AMM8 73 aa3.52□□□□□ -1.85
FOCAD-213ENST00000604254 TRIAP1O43715 76 aa3.52□□□□□ -1.85
FOCAD-213ENST00000604254 IGKCP01834 107 aa3.52□□□□□ -1.85
FOCAD-213ENST00000604254 SMIM13P0DJ93 91 aa3.52□□□□□ -1.85
FOCAD-213ENST00000604254 RPL13AP40429 203 aaKnown RBP3.52□□□□□ -1.85
FOCAD-213ENST00000604254 PLEKHB2Q96CS7 222 aa3.52□□□□□ -1.85
FOCAD-213ENST00000604254 PMCHL2Q9BQD1 86 aa3.52□□□□□ -1.85
FOCAD-213ENST00000604254 NDUFA12Q9UI09 145 aa3.52□□□□□ -1.85
FOCAD-213ENST00000604254 LEPROTO15243 131 aa3.51□□□□□ -1.85
FOCAD-213ENST00000604254 KRTAP1-4P0C5Y4 121 aa3.51□□□□□ -1.85
FOCAD-213ENST00000604254 LGALS3P17931 250 aaKnown RBP3.51□□□□□ -1.85
FOCAD-213ENST00000604254 TSPEAR-AS2P59090 65 aa3.51□□□□□ -1.85
FOCAD-213ENST00000604254 PRLHP81277 87 aa3.51□□□□□ -1.85
FOCAD-213ENST00000604254 MIR7-3HGQ8N6C7 128 aa3.51□□□□□ -1.85
FOCAD-213ENST00000604254 Q8NDZ9 215 aa3.51□□□□□ -1.85
FOCAD-213ENST00000604254 TMEM238C9JI98 176 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 J3QQQ9 107 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 M0R378 163 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 NCR3O14931 201 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BKO60814 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BJP06899 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BOP23527 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BBP33778 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 NMUP48645 174 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BDP58876 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BCP62807 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST2H2BEQ16778 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.5□□□□□ -1.85
FOCAD-213ENST00000604254 FAM19A1Q7Z5A9 133 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 BOD1L2Q8IYS8 172 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BHQ93079 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BNQ99877 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 HIST1H2BMQ99879 126 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 MIEN1Q9BRT3 115 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 TMEM126AQ9H061 195 aa3.5□□□□□ -1.85
FOCAD-213ENST00000604254 SYS1-DBNDD2H3BUS1 97 aa3.49□□□□□ -1.85
FOCAD-213ENST00000604254 S100A12P80511 92 aa3.49□□□□□ -1.85
FOCAD-213ENST00000604254 KRTAP13-1Q8IUC0 172 aa3.49□□□□□ -1.85
FOCAD-213ENST00000604254 LINC00518Q8N0U6 118 aa3.49□□□□□ -1.85
FOCAD-213ENST00000604254 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
FOCAD-213ENST00000604254 IGKV2D-26A0A0A0MRZ7 120 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms