RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 MEIG1Q5JSS6 88 aa7□□□□□ -1.29
CCDC12-209ENST00000604164 NDUFA12Q9UI09 145 aa7□□□□□ -1.29
CCDC12-209ENST00000604164 FAT3Q8TDW7 4589 aa7□□□□□ -1.29
CCDC12-209ENST00000604164 LEPROTO15243 131 aa6.99□□□□□ -1.29
CCDC12-209ENST00000604164 IGKCP01834 107 aa6.99□□□□□ -1.29
CCDC12-209ENST00000604164 VPREB1P12018 145 aa6.99□□□□□ -1.29
CCDC12-209ENST00000604164 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 NMUP48645 174 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 UBE2AP49459 152 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
CCDC12-209ENST00000604164 SCO1O75880 301 aa6.97□□□□□ -1.29
CCDC12-209ENST00000604164 IGKV2-28A0A075B6P5 120 aa6.96□□□□□ -1.3
CCDC12-209ENST00000604164 J3QQQ9 107 aa6.96□□□□□ -1.3
CCDC12-209ENST00000604164 IGKV2D-28P01615 120 aa6.96□□□□□ -1.3
CCDC12-209ENST00000604164 SMIM13P0DJ93 91 aa6.96□□□□□ -1.3
CCDC12-209ENST00000604164 LGALS3P17931 250 aaKnown RBP6.96□□□□□ -1.3
CCDC12-209ENST00000604164 A0A0U1RRA0 63 aa6.95□□□□□ -1.3
CCDC12-209ENST00000604164 M0R378 163 aa6.95□□□□□ -1.3
CCDC12-209ENST00000604164 MIR7-3HGQ8N6C7 128 aa6.95□□□□□ -1.3
CCDC12-209ENST00000604164 PRR26Q8N8Z3 221 aa6.95□□□□□ -1.3
CCDC12-209ENST00000604164 IGKV2D-26A0A0A0MRZ7 120 aa6.94□□□□□ -1.3
CCDC12-209ENST00000604164 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
CCDC12-209ENST00000604164 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
CCDC12-209ENST00000604164 S100A12P80511 92 aa6.94□□□□□ -1.3
CCDC12-209ENST00000604164 BOD1L2Q8IYS8 172 aa6.94□□□□□ -1.3
CCDC12-209ENST00000604164 PMCHL2Q9BQD1 86 aa6.94□□□□□ -1.3
CCDC12-209ENST00000604164 TMEM126AQ9H061 195 aa6.94□□□□□ -1.3
CCDC12-209ENST00000604164 PET117Q6UWS5 81 aa6.93□□□□□ -1.3
CCDC12-209ENST00000604164 FAM19A1Q7Z5A9 133 aa6.93□□□□□ -1.3
CCDC12-209ENST00000604164 MIEN1Q9BRT3 115 aa6.93□□□□□ -1.3
CCDC12-209ENST00000604164 E9PLD3 99 aa6.91□□□□□ -1.3
CCDC12-209ENST00000604164 CRYGAP11844 174 aa6.91□□□□□ -1.3
CCDC12-209ENST00000604164 TSPEAR-AS2P59090 65 aa6.91□□□□□ -1.3
CCDC12-209ENST00000604164 COA6Q5JTJ3 125 aaKnown RBP6.91□□□□□ -1.3
CCDC12-209ENST00000604164 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
CCDC12-209ENST00000604164 LOC107984156A0A0G2JMH3 177 aa6.9□□□□□ -1.3
CCDC12-209ENST00000604164 TMEM238C9JI98 176 aa6.9□□□□□ -1.3
CCDC12-209ENST00000604164 PRYO14603 147 aa6.9□□□□□ -1.3
CCDC12-209ENST00000604164 AKR1D1P51857 326 aa6.9□□□□□ -1.3
CCDC12-209ENST00000604164 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
CCDC12-209ENST00000604164 ARL17AQ8IVW1 177 aa6.9□□□□□ -1.3
CCDC12-209ENST00000604164 Q8NDZ9 215 aa6.9□□□□□ -1.3
CCDC12-209ENST00000604164 C20orf202A1L168 122 aa6.89□□□□□ -1.31
CCDC12-209ENST00000604164 NCR3O14931 201 aa6.89□□□□□ -1.31
CCDC12-209ENST00000604164 S100A1P23297 94 aa6.89□□□□□ -1.31
CCDC12-209ENST00000604164 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
CCDC12-209ENST00000604164 TRBV10-2A0A0K0K1G8 114 aa6.88□□□□□ -1.31
CCDC12-209ENST00000604164 PRLHP81277 87 aa6.88□□□□□ -1.31
CCDC12-209ENST00000604164 KCNQ1DNQ9H478 68 aa6.88□□□□□ -1.31
CCDC12-209ENST00000604164 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
CCDC12-209ENST00000604164 NDUFC2O95298 119 aa6.87□□□□□ -1.31
CCDC12-209ENST00000604164 KRTDAPP60985 99 aa6.87□□□□□ -1.31
CCDC12-209ENST00000604164 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
CCDC12-209ENST00000604164 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
CCDC12-209ENST00000604164 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
CCDC12-209ENST00000604164 ZNF706Q9Y5V0 76 aaPredicted RBP6.87□□□□□ -1.31
CCDC12-209ENST00000604164 TNXBP22105 4242 aa6.87□□□□□ -1.31
CCDC12-209ENST00000604164 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
CCDC12-209ENST00000604164 ETDCA0A1B0GVM5 59 aa6.86□□□□□ -1.31
CCDC12-209ENST00000604164 C3orf79P0CE67 100 aa6.86□□□□□ -1.31
CCDC12-209ENST00000604164 DAND5Q8N907 189 aa6.86□□□□□ -1.31
CCDC12-209ENST00000604164 TIMM17BO60830 172 aa6.85□□□□□ -1.31
CCDC12-209ENST00000604164 DDTP30046 118 aa6.85□□□□□ -1.31
CCDC12-209ENST00000604164 S100A7L2Q5SY68 101 aa6.85□□□□□ -1.31
CCDC12-209ENST00000604164 HIGD2AQ9BW72 106 aa6.85□□□□□ -1.31
CCDC12-209ENST00000604164 A0A087X002 238 aa6.84□□□□□ -1.31
CCDC12-209ENST00000604164 TRBV10-3A0A0K0K1G6 114 aa6.84□□□□□ -1.31
CCDC12-209ENST00000604164 SPRR1AP35321 89 aa6.84□□□□□ -1.31
CCDC12-209ENST00000604164 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
CCDC12-209ENST00000604164 HMCN2Q8NDA2 5059 aa6.83□□□□□ -1.32
CCDC12-209ENST00000604164 CTAG1AP78358 180 aa6.82□□□□□ -1.32
CCDC12-209ENST00000604164 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
CCDC12-209ENST00000604164 S100A2P29034 98 aa6.81□□□□□ -1.32
CCDC12-209ENST00000604164 SNRPEP62304 92 aaKnown RBP6.81□□□□□ -1.32
CCDC12-209ENST00000604164 JOSD1Q15040 202 aaPredicted RBP6.81□□□□□ -1.32
CCDC12-209ENST00000604164 ADAMTSL4-AS1Q5T5F5 129 aa6.81□□□□□ -1.32
CCDC12-209ENST00000604164 ANAPC11Q9NYG5 84 aa6.81□□□□□ -1.32
CCDC12-209ENST00000604164 IGLV6-57P01721 117 aa6.8□□□□□ -1.32
CCDC12-209ENST00000604164 HINT1P49773 126 aaPredicted RBP6.8□□□□□ -1.32
CCDC12-209ENST00000604164 SCGB1D4Q6XE38 83 aa6.8□□□□□ -1.32
CCDC12-209ENST00000604164 SPANXCQ9NY87 97 aa6.8□□□□□ -1.32
CCDC12-209ENST00000604164 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
CCDC12-209ENST00000604164 KRTAP4-16G5E9R7 235 aaPredicted RBP6.79□□□□□ -1.32
CCDC12-209ENST00000604164 S100A6P06703 90 aa6.79□□□□□ -1.32
CCDC12-209ENST00000604164 NPC2P61916 151 aa6.79□□□□□ -1.32
CCDC12-209ENST00000604164 LINC00304Q8N9R0 145 aa6.79□□□□□ -1.32
CCDC12-209ENST00000604164 LINC00308Q8TCZ7 52 aa6.79□□□□□ -1.32
CCDC12-209ENST00000604164 SPRR4Q96PI1 79 aa6.79□□□□□ -1.32
CCDC12-209ENST00000604164 B5MCH6 92 aa6.78□□□□□ -1.32
CCDC12-209ENST00000604164 TSPAN13O95857 204 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms