RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 HIST1H2BBP33778 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST1H2BDP58876 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST1H2BCP62807 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST2H2BEQ16778 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST1H2BHQ93079 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST1H2BNQ99877 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 HIST1H2BMQ99879 126 aa8.73□□□□□ -1.01
TUBE1-204ENST00000603621 ATP6V1G1O75348 118 aa8.72□□□□□ -1.01
TUBE1-204ENST00000603621 MEIG1Q5JSS6 88 aa8.72□□□□□ -1.01
TUBE1-204ENST00000603621 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
TUBE1-204ENST00000603621 ZNF861PO60384 105 aa8.71□□□□□ -1.02
TUBE1-204ENST00000603621 DPM2O94777 84 aa8.71□□□□□ -1.02
TUBE1-204ENST00000603621 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
TUBE1-204ENST00000603621 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
TUBE1-204ENST00000603621 PLNP26678 52 aa8.71□□□□□ -1.02
TUBE1-204ENST00000603621 RPL24P83731 157 aaKnown RBP8.71□□□□□ -1.02
TUBE1-204ENST00000603621 MAP1LC3CQ9BXW4 147 aa8.71□□□□□ -1.02
TUBE1-204ENST00000603621 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
TUBE1-204ENST00000603621 BCE1O60756 84 aa8.7□□□□□ -1.02
TUBE1-204ENST00000603621 IGKCP01834 107 aa8.7□□□□□ -1.02
TUBE1-204ENST00000603621 VPREB1P12018 145 aa8.7□□□□□ -1.02
TUBE1-204ENST00000603621 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
TUBE1-204ENST00000603621 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
TUBE1-204ENST00000603621 LEPROTO15243 131 aa8.69□□□□□ -1.02
TUBE1-204ENST00000603621 TSPEAR-AS2P59090 65 aa8.69□□□□□ -1.02
TUBE1-204ENST00000603621 Q8NDZ9 215 aa8.69□□□□□ -1.02
TUBE1-204ENST00000603621 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
TUBE1-204ENST00000603621 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
TUBE1-204ENST00000603621 HERVK_113P61574 105 aa8.68□□□□□ -1.02
TUBE1-204ENST00000603621 HERV-K104P63124 156 aa8.68□□□□□ -1.02
TUBE1-204ENST00000603621 PLEKHB2Q96CS7 222 aa8.68□□□□□ -1.02
TUBE1-204ENST00000603621 UBE2AP49459 152 aa8.67□□□□□ -1.02
TUBE1-204ENST00000603621 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
TUBE1-204ENST00000603621 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
TUBE1-204ENST00000603621 J3QQQ9 107 aa8.66□□□□□ -1.02
TUBE1-204ENST00000603621 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
TUBE1-204ENST00000603621 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
TUBE1-204ENST00000603621 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
TUBE1-204ENST00000603621 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
TUBE1-204ENST00000603621 BOD1L2Q8IYS8 172 aa8.65□□□□□ -1.02
TUBE1-204ENST00000603621 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
TUBE1-204ENST00000603621 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
TUBE1-204ENST00000603621 NCR3O14931 201 aa8.63□□□□□ -1.03
TUBE1-204ENST00000603621 DAND5Q8N907 189 aa8.63□□□□□ -1.03
TUBE1-204ENST00000603621 TMEM126AQ9H061 195 aa8.63□□□□□ -1.03
TUBE1-204ENST00000603621 M0R378 163 aa8.62□□□□□ -1.03
TUBE1-204ENST00000603621 PRLHP81277 87 aa8.62□□□□□ -1.03
TUBE1-204ENST00000603621 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
TUBE1-204ENST00000603621 NMUP48645 174 aa8.61□□□□□ -1.03
TUBE1-204ENST00000603621 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
TUBE1-204ENST00000603621 PET117Q6UWS5 81 aa8.6□□□□□ -1.03
TUBE1-204ENST00000603621 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
TUBE1-204ENST00000603621 E9PLD3 99 aa8.59□□□□□ -1.03
TUBE1-204ENST00000603621 C3orf79P0CE67 100 aa8.59□□□□□ -1.03
TUBE1-204ENST00000603621 RPL13AP40429 203 aaKnown RBP8.59□□□□□ -1.03
TUBE1-204ENST00000603621 KRTDAPP60985 99 aa8.59□□□□□ -1.03
TUBE1-204ENST00000603621 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
TUBE1-204ENST00000603621 ANAPC11Q9NYG5 84 aa8.59□□□□□ -1.03
TUBE1-204ENST00000603621 COA6Q5JTJ3 125 aaKnown RBP8.58□□□□□ -1.04
TUBE1-204ENST00000603621 A0A0J9YXY3 114 aa8.57□□□□□ -1.04
TUBE1-204ENST00000603621 NPC2P61916 151 aa8.57□□□□□ -1.04
TUBE1-204ENST00000603621 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
TUBE1-204ENST00000603621 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
TUBE1-204ENST00000603621 A0A087X002 238 aa8.56□□□□□ -1.04
TUBE1-204ENST00000603621 S100A1P23297 94 aa8.56□□□□□ -1.04
TUBE1-204ENST00000603621 IGKV2D-26A0A0A0MRZ7 120 aa8.55□□□□□ -1.04
TUBE1-204ENST00000603621 CRYGAP11844 174 aa8.55□□□□□ -1.04
TUBE1-204ENST00000603621 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
TUBE1-204ENST00000603621 TRBV10-3A0A0K0K1G6 114 aa8.54□□□□□ -1.04
TUBE1-204ENST00000603621 PRYO14603 147 aa8.54□□□□□ -1.04
TUBE1-204ENST00000603621 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
TUBE1-204ENST00000603621 LOC107984156A0A0G2JMH3 177 aa8.53□□□□□ -1.04
TUBE1-204ENST00000603621 ARL17AQ8IVW1 177 aa8.53□□□□□ -1.04
TUBE1-204ENST00000603621 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
TUBE1-204ENST00000603621 C20orf202A1L168 122 aa8.52□□□□□ -1.05
TUBE1-204ENST00000603621 DDTP30046 118 aa8.52□□□□□ -1.05
TUBE1-204ENST00000603621 S100A12P80511 92 aa8.52□□□□□ -1.05
TUBE1-204ENST00000603621 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
TUBE1-204ENST00000603621 KCNQ1DNQ9H478 68 aa8.52□□□□□ -1.05
TUBE1-204ENST00000603621 ETDCA0A1B0GVM5 59 aa8.51□□□□□ -1.05
TUBE1-204ENST00000603621 ZNF815PA8K554 130 aa8.51□□□□□ -1.05
TUBE1-204ENST00000603621 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-204ENST00000603621 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
TUBE1-204ENST00000603621 LRP2P98164 4655 aa8.5□□□□□ -1.05
TUBE1-204ENST00000603621 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
TUBE1-204ENST00000603621 TSPAN13O95857 204 aa8.5□□□□□ -1.05
TUBE1-204ENST00000603621 S100A7L2Q5SY68 101 aa8.5□□□□□ -1.05
TUBE1-204ENST00000603621 LCE2CQ5TA81 110 aa8.5□□□□□ -1.05
TUBE1-204ENST00000603621 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
TUBE1-204ENST00000603621 SPANXB1Q9NS25 103 aaPredicted RBP8.5□□□□□ -1.05
TUBE1-204ENST00000603621 NDUFC2O95298 119 aa8.49□□□□□ -1.05
TUBE1-204ENST00000603621 SPRR1AP35321 89 aa8.49□□□□□ -1.05
TUBE1-204ENST00000603621 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
TUBE1-204ENST00000603621 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
TUBE1-204ENST00000603621 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
TUBE1-204ENST00000603621 S100A2P29034 98 aa8.47□□□□□ -1.05
TUBE1-204ENST00000603621 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
TUBE1-204ENST00000603621 SMCR5Q8TEV8 140 aa8.47□□□□□ -1.05
TUBE1-204ENST00000603621 LITAFQ99732 161 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms