RNA–Protein interactions for RNA: ENST00000603439.1

AC078880.3-201, humanhuman

BASIC

Gene AC078880.3, Length 1,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.3-201ENST00000603439 SVBPQ8N300 66 aa7.1□□□□□ -1.27
AC078880.3-201ENST00000603439 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
AC078880.3-201ENST00000603439 IGKV2-28A0A075B6P5 120 aa7.09□□□□□ -1.27
AC078880.3-201ENST00000603439 A0A087X002 238 aa7.09□□□□□ -1.27
AC078880.3-201ENST00000603439 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
AC078880.3-201ENST00000603439 IGKV2D-28P01615 120 aa7.09□□□□□ -1.27
AC078880.3-201ENST00000603439 VPREB1P12018 145 aa7.08□□□□□ -1.28
AC078880.3-201ENST00000603439 TMEM170BQ5T4T1 132 aa7.08□□□□□ -1.28
AC078880.3-201ENST00000603439 BAGE3Q86Y29 109 aa7.08□□□□□ -1.28
AC078880.3-201ENST00000603439 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
AC078880.3-201ENST00000603439 YPEL4Q96NS1 127 aa7.08□□□□□ -1.28
AC078880.3-201ENST00000603439 SND1-IT1Q9HBX3 110 aa7.08□□□□□ -1.28
AC078880.3-201ENST00000603439 UBE2AP49459 152 aa7.07□□□□□ -1.28
AC078880.3-201ENST00000603439 Q8NDZ9 215 aa7.07□□□□□ -1.28
AC078880.3-201ENST00000603439 PRLHP81277 87 aa7.06□□□□□ -1.28
AC078880.3-201ENST00000603439 CHTOPQ9Y3Y2 248 aaKnown RBP7.06□□□□□ -1.28
AC078880.3-201ENST00000603439 TMEM238C9JI98 176 aa7.05□□□□□ -1.28
AC078880.3-201ENST00000603439 COX17Q14061 63 aa7.05□□□□□ -1.28
AC078880.3-201ENST00000603439 SFTA2Q6UW10 78 aa7.05□□□□□ -1.28
AC078880.3-201ENST00000603439 CRYGAP11844 174 aa7.04□□□□□ -1.28
AC078880.3-201ENST00000603439 PRR4Q16378 134 aa7.04□□□□□ -1.28
AC078880.3-201ENST00000603439 CHCHD1Q96BP2 118 aaKnown RBP7.04□□□□□ -1.28
AC078880.3-201ENST00000603439 TMEM126AQ9H061 195 aa7.04□□□□□ -1.28
AC078880.3-201ENST00000603439 ANAPC11Q9NYG5 84 aa7.04□□□□□ -1.28
AC078880.3-201ENST00000603439 TRAV12-1A0A0B4J245 112 aa7.03□□□□□ -1.28
AC078880.3-201ENST00000603439 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
AC078880.3-201ENST00000603439 KRTAP13-2Q52LG2 175 aa7.03□□□□□ -1.28
AC078880.3-201ENST00000603439 CBLN2Q8IUK8 224 aa7.03□□□□□ -1.28
AC078880.3-201ENST00000603439 TYMSOSQ8TAI1 123 aa7.03□□□□□ -1.28
AC078880.3-201ENST00000603439 IFI27L1Q96BM0 104 aa7.03□□□□□ -1.28
AC078880.3-201ENST00000603439 M0R378 163 aa7.02□□□□□ -1.29
AC078880.3-201ENST00000603439 TSPAN13O95857 204 aa7.02□□□□□ -1.29
AC078880.3-201ENST00000603439 RPL24P83731 157 aaKnown RBP7.02□□□□□ -1.29
AC078880.3-201ENST00000603439 FAM19A1Q7Z5A9 133 aa7.02□□□□□ -1.29
AC078880.3-201ENST00000603439 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
AC078880.3-201ENST00000603439 SVIPQ8NHG7 77 aa7.01□□□□□ -1.29
AC078880.3-201ENST00000603439 A0A0U1RRA0 63 aa7□□□□□ -1.29
AC078880.3-201ENST00000603439 HSBP1O75506 76 aa7□□□□□ -1.29
AC078880.3-201ENST00000603439 LINC00158P58513 81 aa7□□□□□ -1.29
AC078880.3-201ENST00000603439 FAM19A2Q8N3H0 131 aa6.99□□□□□ -1.29
AC078880.3-201ENST00000603439 SMIM13P0DJ93 91 aa6.98□□□□□ -1.29
AC078880.3-201ENST00000603439 LINC00310P59036 64 aa6.98□□□□□ -1.29
AC078880.3-201ENST00000603439 MEIG1Q5JSS6 88 aa6.98□□□□□ -1.29
AC078880.3-201ENST00000603439 H0Y8G0 127 aa6.97□□□□□ -1.29
AC078880.3-201ENST00000603439 NCR3O14931 201 aa6.97□□□□□ -1.29
AC078880.3-201ENST00000603439 LINC00304Q8N9R0 145 aa6.97□□□□□ -1.29
AC078880.3-201ENST00000603439 MUC17Q685J3 4493 aa6.96□□□□□ -1.3
AC078880.3-201ENST00000603439 MUC2Q02817 5179 aa6.96□□□□□ -1.3
AC078880.3-201ENST00000603439 TRGC2P03986 189 aa6.96□□□□□ -1.3
AC078880.3-201ENST00000603439 TSPEAR-AS2P59090 65 aa6.96□□□□□ -1.3
AC078880.3-201ENST00000603439 MIR7-3HGQ8N6C7 128 aa6.96□□□□□ -1.3
AC078880.3-201ENST00000603439 HIGD2AQ9BW72 106 aa6.96□□□□□ -1.3
AC078880.3-201ENST00000603439 IGKV2D-26A0A0A0MRZ7 120 aa6.95□□□□□ -1.3
AC078880.3-201ENST00000603439 PRYO14603 147 aa6.95□□□□□ -1.3
AC078880.3-201ENST00000603439 SERF1AO75920 110 aa6.95□□□□□ -1.3
AC078880.3-201ENST00000603439 HERV-K104P63124 156 aa6.95□□□□□ -1.3
AC078880.3-201ENST00000603439 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
AC078880.3-201ENST00000603439 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
AC078880.3-201ENST00000603439 RETNLBQ9BQ08 111 aa6.95□□□□□ -1.3
AC078880.3-201ENST00000603439 NDUFA12Q9UI09 145 aa6.95□□□□□ -1.3
AC078880.3-201ENST00000603439 LEPROTL1O95214 131 aa6.94□□□□□ -1.3
AC078880.3-201ENST00000603439 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
AC078880.3-201ENST00000603439 PLEKHB2Q96CS7 222 aa6.94□□□□□ -1.3
AC078880.3-201ENST00000603439 ATP6V1G1O75348 118 aa6.93□□□□□ -1.3
AC078880.3-201ENST00000603439 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
AC078880.3-201ENST00000603439 KRTAP4-7Q9BYR0 210 aa6.93□□□□□ -1.3
AC078880.3-201ENST00000603439 MYMXA0A1B0GTQ4 84 aa6.92□□□□□ -1.3
AC078880.3-201ENST00000603439 SPRR1AP35321 89 aa6.92□□□□□ -1.3
AC078880.3-201ENST00000603439 LEPROTO15243 131 aa6.91□□□□□ -1.3
AC078880.3-201ENST00000603439 PLNP26678 52 aa6.91□□□□□ -1.3
AC078880.3-201ENST00000603439 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
AC078880.3-201ENST00000603439 DAND5Q8N907 189 aa6.91□□□□□ -1.3
AC078880.3-201ENST00000603439 TRBV10-3A0A0K0K1G6 114 aa6.9□□□□□ -1.3
AC078880.3-201ENST00000603439 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.3
AC078880.3-201ENST00000603439 PMCHL2Q9BQD1 86 aa6.9□□□□□ -1.3
AC078880.3-201ENST00000603439 MAP1LC3CQ9BXW4 147 aa6.9□□□□□ -1.3
AC078880.3-201ENST00000603439 KCNQ1DNQ9H478 68 aa6.9□□□□□ -1.3
AC078880.3-201ENST00000603439 ZNF706Q9Y5V0 76 aaPredicted RBP6.9□□□□□ -1.3
AC078880.3-201ENST00000603439 LINC00587B1AMM8 73 aa6.89□□□□□ -1.31
AC078880.3-201ENST00000603439 DPM2O94777 84 aa6.89□□□□□ -1.31
AC078880.3-201ENST00000603439 HERVK_113P61574 105 aa6.89□□□□□ -1.31
AC078880.3-201ENST00000603439 HSPB8Q9UJY1 196 aa6.89□□□□□ -1.31
AC078880.3-201ENST00000603439 ETDCA0A1B0GVM5 59 aa6.88□□□□□ -1.31
AC078880.3-201ENST00000603439 J3QQQ9 107 aa6.88□□□□□ -1.31
AC078880.3-201ENST00000603439 IGKCP01834 107 aa6.88□□□□□ -1.31
AC078880.3-201ENST00000603439 FABP4P15090 132 aa6.88□□□□□ -1.31
AC078880.3-201ENST00000603439 SLC7A5P1Q8MH63 180 aa6.88□□□□□ -1.31
AC078880.3-201ENST00000603439 SMCR5Q8TEV8 140 aa6.88□□□□□ -1.31
AC078880.3-201ENST00000603439 COLCA2A8K830 154 aa6.87□□□□□ -1.31
AC078880.3-201ENST00000603439 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
AC078880.3-201ENST00000603439 NMUP48645 174 aa6.87□□□□□ -1.31
AC078880.3-201ENST00000603439 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
AC078880.3-201ENST00000603439 LOC107984156A0A0G2JMH3 177 aa6.86□□□□□ -1.31
AC078880.3-201ENST00000603439 CTAG1AP78358 180 aa6.86□□□□□ -1.31
AC078880.3-201ENST00000603439 ARL17AQ8IVW1 177 aa6.86□□□□□ -1.31
AC078880.3-201ENST00000603439 PPDPFQ9H3Y8 114 aa6.86□□□□□ -1.31
AC078880.3-201ENST00000603439 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
AC078880.3-201ENST00000603439 FAT4Q6V0I7 4981 aa6.86□□□□□ -1.31
AC078880.3-201ENST00000603439 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
AC078880.3-201ENST00000603439 TRBV10-2A0A0K0K1G8 114 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms