RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 GAGE2EQ4V326 116 aa11.57□□□□□ -0.56
PPFIA3-207ENST00000602716 CASC10Q5T4H9 136 aa11.57□□□□□ -0.56
PPFIA3-207ENST00000602716 MIR7-3HGQ8N6C7 128 aa11.57□□□□□ -0.56
PPFIA3-207ENST00000602716 GAGE2DQ9UEU5 116 aa11.57□□□□□ -0.56
PPFIA3-207ENST00000602716 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
PPFIA3-207ENST00000602716 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
PPFIA3-207ENST00000602716 Q6Q795 121 aa11.55□□□□□ -0.56
PPFIA3-207ENST00000602716 IGKV2D-24A0A075B6R9 120 aa11.54□□□□□ -0.56
PPFIA3-207ENST00000602716 ANAPC13Q9BS18 74 aa11.54□□□□□ -0.56
PPFIA3-207ENST00000602716 RPL28P46779 137 aaKnown RBP11.53□□□□□ -0.56
PPFIA3-207ENST00000602716 FAM218AQ96MZ4 157 aa11.53□□□□□ -0.56
PPFIA3-207ENST00000602716 C1orf43Q9BWL3 253 aa11.53□□□□□ -0.56
PPFIA3-207ENST00000602716 DNAH10Q8IVF4 4471 aa11.53□□□□□ -0.56
PPFIA3-207ENST00000602716 IGKV2-28A0A075B6P5 120 aa11.53□□□□□ -0.56
PPFIA3-207ENST00000602716 IGKV2D-28P01615 120 aa11.53□□□□□ -0.56
PPFIA3-207ENST00000602716 LINC00337Q8N6G1 96 aa11.53□□□□□ -0.56
PPFIA3-207ENST00000602716 SND1-IT1Q9HBX3 110 aa11.53□□□□□ -0.56
PPFIA3-207ENST00000602716 LINC00158P58513 81 aa11.52□□□□□ -0.57
PPFIA3-207ENST00000602716 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
PPFIA3-207ENST00000602716 NDUFV3P56181 108 aaKnown RBP11.5□□□□□ -0.57
PPFIA3-207ENST00000602716 TTC32Q5I0X7 151 aa11.5□□□□□ -0.57
PPFIA3-207ENST00000602716 BAALC-AS2P0C853 105 aa11.5□□□□□ -0.57
PPFIA3-207ENST00000602716 MALP21145 153 aa11.5□□□□□ -0.57
PPFIA3-207ENST00000602716 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
PPFIA3-207ENST00000602716 ALMS1Q8TCU4 4167 aa11.49□□□□□ -0.57
PPFIA3-207ENST00000602716 NBDYA0A0U1RRE5 68 aa11.48□□□□□ -0.57
PPFIA3-207ENST00000602716 KIAA0087Q14695 138 aa11.48□□□□□ -0.57
PPFIA3-207ENST00000602716 M0R2N4 97 aa11.48□□□□□ -0.57
PPFIA3-207ENST00000602716 ACYP1P07311 99 aa11.48□□□□□ -0.57
PPFIA3-207ENST00000602716 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
PPFIA3-207ENST00000602716 LINC01561Q8N1V8 128 aa11.47□□□□□ -0.57
PPFIA3-207ENST00000602716 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
PPFIA3-207ENST00000602716 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
PPFIA3-207ENST00000602716 C6orf223Q8N319 242 aa11.47□□□□□ -0.57
PPFIA3-207ENST00000602716 SMIM11BQ8TCY0 68 aa11.47□□□□□ -0.57
PPFIA3-207ENST00000602716 C3orf84H3BNL1 204 aa11.46□□□□□ -0.57
PPFIA3-207ENST00000602716 PFN2P35080 140 aa11.46□□□□□ -0.57
PPFIA3-207ENST00000602716 LY6G6CO95867 125 aa11.45□□□□□ -0.58
PPFIA3-207ENST00000602716 SPAG11BQ08648 103 aa11.45□□□□□ -0.58
PPFIA3-207ENST00000602716 LINC00476Q8WZB0 136 aa11.45□□□□□ -0.58
PPFIA3-207ENST00000602716 Q8IZM0 81 aa11.45□□□□□ -0.58
PPFIA3-207ENST00000602716 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
PPFIA3-207ENST00000602716 TRBV7-7A0A0K0K1E9 115 aa11.43□□□□□ -0.58
PPFIA3-207ENST00000602716 LECT2O14960 151 aa11.43□□□□□ -0.58
PPFIA3-207ENST00000602716 A0A087WYN8 130 aa11.42□□□□□ -0.58
PPFIA3-207ENST00000602716 C10orf25Q5T742 122 aa11.42□□□□□ -0.58
PPFIA3-207ENST00000602716 SS18L2Q9UHA2 77 aa11.42□□□□□ -0.58
PPFIA3-207ENST00000602716 H0YGX0 51 aa11.42□□□□□ -0.58
PPFIA3-207ENST00000602716 DNAH2Q9P225 4427 aa11.41□□□□□ -0.58
PPFIA3-207ENST00000602716 RMI2Q96E14 147 aa11.41□□□□□ -0.58
PPFIA3-207ENST00000602716 INAFM2P0DMQ5 153 aa11.4□□□□□ -0.58
PPFIA3-207ENST00000602716 SDIM1Q6ZPB5 146 aa11.4□□□□□ -0.58
PPFIA3-207ENST00000602716 Q6ZR54 194 aa11.4□□□□□ -0.58
PPFIA3-207ENST00000602716 SMCR5Q8TEV8 140 aa11.4□□□□□ -0.58
PPFIA3-207ENST00000602716 USP17L23D6RBM5 183 aa11.4□□□□□ -0.59
PPFIA3-207ENST00000602716 Q6ZRN7 208 aaPredicted RBP11.4□□□□□ -0.59
PPFIA3-207ENST00000602716 DNAH6Q9C0G6 4158 aa11.39□□□□□ -0.59
PPFIA3-207ENST00000602716 HYDINQ4G0P3 5121 aa11.39□□□□□ -0.59
PPFIA3-207ENST00000602716 UNQ6190/PRO20217Q6UXQ8 127 aa11.39□□□□□ -0.59
PPFIA3-207ENST00000602716 DNAL4O96015 105 aa11.38□□□□□ -0.59
PPFIA3-207ENST00000602716 C9orf116Q5BN46 136 aaPredicted RBP11.38□□□□□ -0.59
PPFIA3-207ENST00000602716 GVQW2A0A096LPI5 108 aaPredicted RBP11.37□□□□□ -0.59
PPFIA3-207ENST00000602716 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
PPFIA3-207ENST00000602716 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
PPFIA3-207ENST00000602716 IMUPQ9GZP8 106 aa11.36□□□□□ -0.59
PPFIA3-207ENST00000602716 SACSQ9NZJ4 4579 aa11.35□□□□□ -0.59
PPFIA3-207ENST00000602716 B5MCH6 92 aa11.35□□□□□ -0.59
PPFIA3-207ENST00000602716 CCDC179H3BU77 68 aa11.35□□□□□ -0.59
PPFIA3-207ENST00000602716 ZNF561-AS1K7EIQ3 104 aa11.35□□□□□ -0.59
PPFIA3-207ENST00000602716 SLPIP03973 132 aa11.35□□□□□ -0.59
PPFIA3-207ENST00000602716 PSCAO43653 123 aa11.34□□□□□ -0.59
PPFIA3-207ENST00000602716 CXCL5P42830 114 aa11.34□□□□□ -0.59
PPFIA3-207ENST00000602716 GAGE2AQ6NT46 116 aa11.34□□□□□ -0.59
PPFIA3-207ENST00000602716 Q6ZRU5 148 aa11.34□□□□□ -0.59
PPFIA3-207ENST00000602716 OBSCN-AS1Q96MR7 158 aa11.34□□□□□ -0.59
PPFIA3-207ENST00000602716 C6orf48Q9UBA6 75 aa11.34□□□□□ -0.59
PPFIA3-207ENST00000602716 C9orf129Q5T035 196 aaKnown RBP11.33□□□□□ -0.6
PPFIA3-207ENST00000602716 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
PPFIA3-207ENST00000602716 COX17Q14061 63 aa11.31□□□□□ -0.6
PPFIA3-207ENST00000602716 LRCOL1A6NCL2 159 aa11.31□□□□□ -0.6
PPFIA3-207ENST00000602716 NDUFC2O95298 119 aa11.3□□□□□ -0.6
PPFIA3-207ENST00000602716 C2orf48Q96LS8 159 aa11.3□□□□□ -0.6
PPFIA3-207ENST00000602716 C14orf132Q9NPU4 83 aa11.29□□□□□ -0.6
PPFIA3-207ENST00000602716 FAM236AA0A1B0GUQ0 79 aa11.28□□□□□ -0.6
PPFIA3-207ENST00000602716 FAM236BA0A1B0GV22 79 aa11.28□□□□□ -0.6
PPFIA3-207ENST00000602716 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
PPFIA3-207ENST00000602716 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
PPFIA3-207ENST00000602716 LINC00167Q96N53 147 aa11.28□□□□□ -0.6
PPFIA3-207ENST00000602716 DNAH17Q9UFH2 4485 aa11.27□□□□□ -0.6
PPFIA3-207ENST00000602716 ORMDL1Q9P0S3 153 aa11.27□□□□□ -0.61
PPFIA3-207ENST00000602716 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
PPFIA3-207ENST00000602716 NCR3O14931 201 aa11.26□□□□□ -0.61
PPFIA3-207ENST00000602716 A0A1B0GX51 115 aa11.25□□□□□ -0.61
PPFIA3-207ENST00000602716 C1orf134Q5TEV5 83 aa11.25□□□□□ -0.61
PPFIA3-207ENST00000602716 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
PPFIA3-207ENST00000602716 SMIM20Q8N5G0 67 aa11.24□□□□□ -0.61
PPFIA3-207ENST00000602716 Q8NDZ9 215 aa11.23□□□□□ -0.61
PPFIA3-207ENST00000602716 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
PPFIA3-207ENST00000602716 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
PPFIA3-207ENST00000602716 Q8N814 137 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms