RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 XAGE1AQ9HD64 81 aa11.88□□□□□ -0.51
CCDC9-205ENST00000600117 SMIM13P0DJ93 91 aa11.87□□□□□ -0.51
CCDC9-205ENST00000600117 MEIG1Q5JSS6 88 aa11.86□□□□□ -0.51
CCDC9-205ENST00000600117 KRTAP7-1Q8IUC3 87 aa11.86□□□□□ -0.51
CCDC9-205ENST00000600117 A0A0J9YXY3 114 aa11.85□□□□□ -0.51
CCDC9-205ENST00000600117 A0A0U1RRA0 63 aa11.85□□□□□ -0.51
CCDC9-205ENST00000600117 FAM168BA1KXE4 195 aa11.85□□□□□ -0.51
CCDC9-205ENST00000600117 LINC00158P58513 81 aa11.85□□□□□ -0.51
CCDC9-205ENST00000600117 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
CCDC9-205ENST00000600117 PYY3Q5JQD4 70 aa11.84□□□□□ -0.51
CCDC9-205ENST00000600117 PCP2Q8IVA1 136 aa11.84□□□□□ -0.51
CCDC9-205ENST00000600117 SND1-IT1Q9HBX3 110 aa11.84□□□□□ -0.51
CCDC9-205ENST00000600117 LINC00587B1AMM8 73 aa11.83□□□□□ -0.52
CCDC9-205ENST00000600117 HSBP1L1C9JCN9 74 aa11.83□□□□□ -0.52
CCDC9-205ENST00000600117 MIR7-3HGQ8N6C7 128 aa11.82□□□□□ -0.52
CCDC9-205ENST00000600117 FAM19A5Q7Z5A7 132 aaPredicted RBP11.81□□□□□ -0.52
CCDC9-205ENST00000600117 LITAFQ99732 161 aa11.8□□□□□ -0.52
CCDC9-205ENST00000600117 PLA2G2DQ9UNK4 145 aa11.8□□□□□ -0.52
CCDC9-205ENST00000600117 PLA2G1BP04054 148 aaKnown RBP11.79□□□□□ -0.52
CCDC9-205ENST00000600117 ADAMTSL4-AS1Q5T5F5 129 aa11.79□□□□□ -0.52
CCDC9-205ENST00000600117 TIMM17BO60830 172 aa11.78□□□□□ -0.52
CCDC9-205ENST00000600117 DAND5Q8N907 189 aa11.78□□□□□ -0.52
CCDC9-205ENST00000600117 PHF5AQ7RTV0 110 aaKnown RBP11.77□□□□□ -0.53
CCDC9-205ENST00000600117 LINC00528Q8N1L1 170 aa11.77□□□□□ -0.53
CCDC9-205ENST00000600117 Q8NDZ9 215 aa11.77□□□□□ -0.53
CCDC9-205ENST00000600117 VAMP8Q9BV40 100 aa11.77□□□□□ -0.53
CCDC9-205ENST00000600117 PKHD1L1Q86WI1 4243 aa11.77□□□□□ -0.53
CCDC9-205ENST00000600117 IGLV5-37A0A075B6J1 123 aa11.76□□□□□ -0.53
CCDC9-205ENST00000600117 PAM16Q9Y3D7 125 aa11.76□□□□□ -0.53
CCDC9-205ENST00000600117 LOC107984156A0A0G2JMH3 177 aa11.75□□□□□ -0.53
CCDC9-205ENST00000600117 M0QXV9 152 aa11.75□□□□□ -0.53
CCDC9-205ENST00000600117 VPREB1P12018 145 aa11.75□□□□□ -0.53
CCDC9-205ENST00000600117 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
CCDC9-205ENST00000600117 ARL17AQ8IVW1 177 aa11.75□□□□□ -0.53
CCDC9-205ENST00000600117 C22orf24Q9Y442 160 aa11.74□□□□□ -0.53
CCDC9-205ENST00000600117 COX8AP10176 69 aa11.73□□□□□ -0.53
CCDC9-205ENST00000600117 RNF213Q63HN8 5207 aa11.73□□□□□ -0.53
CCDC9-205ENST00000600117 SOSTDC1Q6X4U4 206 aa11.73□□□□□ -0.53
CCDC9-205ENST00000600117 SCGB1D4Q6XE38 83 aa11.73□□□□□ -0.53
CCDC9-205ENST00000600117 BOD1L2Q8IYS8 172 aa11.73□□□□□ -0.53
CCDC9-205ENST00000600117 TP73-AS1Q9UF72 201 aa11.73□□□□□ -0.53
CCDC9-205ENST00000600117 EIF4EBP3O60516 100 aaPredicted RBP11.72□□□□□ -0.53
CCDC9-205ENST00000600117 LOC105371267A0A1B0GV96 52 aa11.71□□□□□ -0.53
CCDC9-205ENST00000600117 KRTAP11-1Q8IUC1 163 aa11.71□□□□□ -0.53
CCDC9-205ENST00000600117 C7orf33Q8WU49 177 aa11.71□□□□□ -0.53
CCDC9-205ENST00000600117 DLEU1O43261 78 aa11.7□□□□□ -0.54
CCDC9-205ENST00000600117 RPL24P83731 157 aaKnown RBP11.7□□□□□ -0.54
CCDC9-205ENST00000600117 SPANXDQ9BXN6 97 aa11.7□□□□□ -0.54
CCDC9-205ENST00000600117 SPANXCQ9NY87 97 aa11.7□□□□□ -0.54
CCDC9-205ENST00000600117 TMEM238C9JI98 176 aa11.69□□□□□ -0.54
CCDC9-205ENST00000600117 OXTP01178 125 aa11.69□□□□□ -0.54
CCDC9-205ENST00000600117 KRTAP10-4P60372 401 aaPredicted RBP11.69□□□□□ -0.54
CCDC9-205ENST00000600117 NPC2P61916 151 aa11.69□□□□□ -0.54
CCDC9-205ENST00000600117 MRPL55Q7Z7F7 128 aaKnown RBP11.69□□□□□ -0.54
CCDC9-205ENST00000600117 LINC00308Q8TCZ7 52 aa11.69□□□□□ -0.54
CCDC9-205ENST00000600117 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
CCDC9-205ENST00000600117 LBHQ53QV2 105 aaPredicted RBP11.68□□□□□ -0.54
CCDC9-205ENST00000600117 NKAPP1Q8N9T2 125 aa11.68□□□□□ -0.54
CCDC9-205ENST00000600117 RPL37AP61513 92 aaKnown RBP11.67□□□□□ -0.54
CCDC9-205ENST00000600117 PRR3P79522 188 aaKnown RBP11.67□□□□□ -0.54
CCDC9-205ENST00000600117 LINC00167Q96N53 147 aa11.67□□□□□ -0.54
CCDC9-205ENST00000600117 MIEN1Q9BRT3 115 aa11.66□□□□□ -0.54
CCDC9-205ENST00000600117 GAGE10A6NGK3 116 aa11.65□□□□□ -0.54
CCDC9-205ENST00000600117 UBE2BP63146 152 aa11.65□□□□□ -0.54
CCDC9-205ENST00000600117 SPANXB1Q9NS25 103 aaPredicted RBP11.65□□□□□ -0.54
CCDC9-205ENST00000600117 NDUFC2O95298 119 aa11.64□□□□□ -0.55
CCDC9-205ENST00000600117 SLC25A34Q6PIV7 304 aa11.64□□□□□ -0.55
CCDC9-205ENST00000600117 Q6ZVH6 145 aa11.64□□□□□ -0.55
CCDC9-205ENST00000600117 PSORS1C2Q9UIG4 136 aa11.64□□□□□ -0.55
CCDC9-205ENST00000600117 M0R378 163 aa11.63□□□□□ -0.55
CCDC9-205ENST00000600117 IFITM1P13164 125 aa11.63□□□□□ -0.55
CCDC9-205ENST00000600117 PPDPFQ9H3Y8 114 aa11.63□□□□□ -0.55
CCDC9-205ENST00000600117 LRP2P98164 4655 aa11.63□□□□□ -0.55
CCDC9-205ENST00000600117 NCR3O14931 201 aa11.62□□□□□ -0.55
CCDC9-205ENST00000600117 SMIM6P0DI80 62 aa11.62□□□□□ -0.55
CCDC9-205ENST00000600117 RPL37AP8A6NKH3 93 aa11.61□□□□□ -0.55
CCDC9-205ENST00000600117 S100A12P80511 92 aa11.61□□□□□ -0.55
CCDC9-205ENST00000600117 C2orf91Q6ZV80 131 aa11.61□□□□□ -0.55
CCDC9-205ENST00000600117 MUSTN1Q8IVN3 82 aa11.61□□□□□ -0.55
CCDC9-205ENST00000600117 IGLV1-50A0A075B6I6 118 aa11.6□□□□□ -0.55
CCDC9-205ENST00000600117 TRBV10-2A0A0K0K1G8 114 aa11.6□□□□□ -0.55
CCDC9-205ENST00000600117 HIGD1BQ9P298 99 aa11.59□□□□□ -0.55
CCDC9-205ENST00000600117 IGKV2-28A0A075B6P5 120 aa11.58□□□□□ -0.56
CCDC9-205ENST00000600117 IGKV2D-28P01615 120 aa11.58□□□□□ -0.56
CCDC9-205ENST00000600117 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCDC9-205ENST00000600117 COPS9Q8WXC6 57 aa11.58□□□□□ -0.56
CCDC9-205ENST00000600117 TNXBP22105 4242 aa11.58□□□□□ -0.56
CCDC9-205ENST00000600117 HNRNPA3P51991 378 aaKnown RBP11.57□□□□□ -0.56
CCDC9-205ENST00000600117 C1orf137Q5JT78 98 aa11.57□□□□□ -0.56
CCDC9-205ENST00000600117 TRBV10-3A0A0K0K1G6 114 aa11.56□□□□□ -0.56
CCDC9-205ENST00000600117 IGLV6-57P01721 117 aa11.54□□□□□ -0.56
CCDC9-205ENST00000600117 HIST1H4GQ99525 98 aa11.54□□□□□ -0.56
CCDC9-205ENST00000600117 UQCR10Q9UDW1 63 aa11.53□□□□□ -0.56
CCDC9-205ENST00000600117 IGLV7-43P04211 117 aa11.52□□□□□ -0.57
CCDC9-205ENST00000600117 DDTP30046 118 aa11.52□□□□□ -0.57
CCDC9-205ENST00000600117 LINC00518Q8N0U6 118 aa11.52□□□□□ -0.57
CCDC9-205ENST00000600117 LINC00337Q8N6G1 96 aa11.52□□□□□ -0.57
CCDC9-205ENST00000600117 KCNQ1DNQ9H478 68 aa11.52□□□□□ -0.57
CCDC9-205ENST00000600117 BCE1O60756 84 aa11.51□□□□□ -0.57
CCDC9-205ENST00000600117 REG3GQ6UW15 175 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms