RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
TGFB1-202ENST00000597453 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
TGFB1-202ENST00000597453 BATFQ16520 125 aa9.35□□□□□ -0.91
TGFB1-202ENST00000597453 C2orf82Q6UX34 121 aa9.35□□□□□ -0.91
TGFB1-202ENST00000597453 H3BRM9 83 aa9.34□□□□□ -0.91
TGFB1-202ENST00000597453 CKS1BP61024 79 aa9.34□□□□□ -0.91
TGFB1-202ENST00000597453 C9orf116Q5BN46 136 aaPredicted RBP9.34□□□□□ -0.91
TGFB1-202ENST00000597453 C6orf226Q5I0X4 101 aa9.34□□□□□ -0.91
TGFB1-202ENST00000597453 REG3GQ6UW15 175 aa9.34□□□□□ -0.91
TGFB1-202ENST00000597453 CXCL5P42830 114 aa9.33□□□□□ -0.92
TGFB1-202ENST00000597453 TRAV12-1A0A0B4J245 112 aa9.32□□□□□ -0.92
TGFB1-202ENST00000597453 SPINK8P0C7L1 97 aa9.32□□□□□ -0.92
TGFB1-202ENST00000597453 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
TGFB1-202ENST00000597453 HINT1P49773 126 aaPredicted RBP9.32□□□□□ -0.92
TGFB1-202ENST00000597453 C11orf86A6NJI1 115 aa9.31□□□□□ -0.92
TGFB1-202ENST00000597453 F8VRH5 84 aa9.31□□□□□ -0.92
TGFB1-202ENST00000597453 BVES-AS1Q5T3Y7 98 aa9.31□□□□□ -0.92
TGFB1-202ENST00000597453 PHF5AQ7RTV0 110 aaKnown RBP9.31□□□□□ -0.92
TGFB1-202ENST00000597453 BOD1L2Q8IYS8 172 aa9.31□□□□□ -0.92
TGFB1-202ENST00000597453 COX7B2Q8TF08 81 aa9.31□□□□□ -0.92
TGFB1-202ENST00000597453 PSORS1C2Q9UIG4 136 aa9.31□□□□□ -0.92
TGFB1-202ENST00000597453 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
TGFB1-202ENST00000597453 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
TGFB1-202ENST00000597453 IGLV5-39A0A0G2JS06 123 aa9.29□□□□□ -0.92
TGFB1-202ENST00000597453 H0Y8G0 127 aa9.29□□□□□ -0.92
TGFB1-202ENST00000597453 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
TGFB1-202ENST00000597453 C2orf91Q6ZV80 131 aa9.29□□□□□ -0.92
TGFB1-202ENST00000597453 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
TGFB1-202ENST00000597453 HSD52Q0P140 79 aa9.27□□□□□ -0.93
TGFB1-202ENST00000597453 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
TGFB1-202ENST00000597453 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
TGFB1-202ENST00000597453 HIGD1BQ9P298 99 aa9.27□□□□□ -0.93
TGFB1-202ENST00000597453 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
TGFB1-202ENST00000597453 DPM2O94777 84 aa9.26□□□□□ -0.93
TGFB1-202ENST00000597453 IGKCP01834 107 aa9.26□□□□□ -0.93
TGFB1-202ENST00000597453 C1orf137Q5JT78 98 aa9.26□□□□□ -0.93
TGFB1-202ENST00000597453 KRTAP11-1Q8IUC1 163 aa9.26□□□□□ -0.93
TGFB1-202ENST00000597453 TAX1BP3O14907 124 aa9.24□□□□□ -0.93
TGFB1-202ENST00000597453 PLNP26678 52 aa9.24□□□□□ -0.93
TGFB1-202ENST00000597453 UBE2V1Q13404 147 aa9.24□□□□□ -0.93
TGFB1-202ENST00000597453 LPAP08519 4548 aa9.24□□□□□ -0.93
TGFB1-202ENST00000597453 TMEM223A0PJW6 202 aa9.23□□□□□ -0.93
TGFB1-202ENST00000597453 A6NDN8 102 aa9.23□□□□□ -0.93
TGFB1-202ENST00000597453 C9orf129Q5T035 196 aaKnown RBP9.23□□□□□ -0.93
TGFB1-202ENST00000597453 FAM19A5Q7Z5A7 132 aaPredicted RBP9.23□□□□□ -0.93
TGFB1-202ENST00000597453 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
TGFB1-202ENST00000597453 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
TGFB1-202ENST00000597453 KRTAP7-1Q8IUC3 87 aa9.22□□□□□ -0.93
TGFB1-202ENST00000597453 XAGE1AQ9HD64 81 aa9.2□□□□□ -0.94
TGFB1-202ENST00000597453 M0QXV9 152 aa9.19□□□□□ -0.94
TGFB1-202ENST00000597453 TAL2Q16559 108 aa9.19□□□□□ -0.94
TGFB1-202ENST00000597453 ZNF625Q96I27 306 aaPredicted RBP9.19□□□□□ -0.94
TGFB1-202ENST00000597453 TP73-AS1Q9UF72 201 aa9.19□□□□□ -0.94
TGFB1-202ENST00000597453 NMUP48645 174 aa9.18□□□□□ -0.94
TGFB1-202ENST00000597453 PRR26Q8N8Z3 221 aa9.18□□□□□ -0.94
TGFB1-202ENST00000597453 DIRC1Q969H9 104 aa9.18□□□□□ -0.94
TGFB1-202ENST00000597453 H0Y9J4 135 aa9.17□□□□□ -0.94
TGFB1-202ENST00000597453 PCP2Q8IVA1 136 aa9.17□□□□□ -0.94
TGFB1-202ENST00000597453 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
TGFB1-202ENST00000597453 COX17Q14061 63 aa9.16□□□□□ -0.94
TGFB1-202ENST00000597453 VAMP3Q15836 100 aa9.16□□□□□ -0.94
TGFB1-202ENST00000597453 C9orf118A6NHY6 69 aa9.15□□□□□ -0.94
TGFB1-202ENST00000597453 PFN2P35080 140 aa9.15□□□□□ -0.94
TGFB1-202ENST00000597453 UBE2BP63146 152 aa9.15□□□□□ -0.94
TGFB1-202ENST00000597453 IGKV2D-26A0A0A0MRZ7 120 aa9.14□□□□□ -0.95
TGFB1-202ENST00000597453 E9PLD3 99 aa9.13□□□□□ -0.95
TGFB1-202ENST00000597453 KRTAP1-4P0C5Y4 121 aa9.13□□□□□ -0.95
TGFB1-202ENST00000597453 HERVK_113P61574 105 aa9.13□□□□□ -0.95
TGFB1-202ENST00000597453 Q6ZVH6 145 aa9.13□□□□□ -0.95
TGFB1-202ENST00000597453 C22orf24Q9Y442 160 aa9.13□□□□□ -0.95
TGFB1-202ENST00000597453 LEPROTO15243 131 aa9.12□□□□□ -0.95
TGFB1-202ENST00000597453 HERV-K104P63124 156 aa9.12□□□□□ -0.95
TGFB1-202ENST00000597453 GTF2H5Q6ZYL4 71 aa9.12□□□□□ -0.95
TGFB1-202ENST00000597453 PLEKHB2Q96CS7 222 aa9.12□□□□□ -0.95
TGFB1-202ENST00000597453 SND1-IT1Q9HBX3 110 aa9.12□□□□□ -0.95
TGFB1-202ENST00000597453 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
TGFB1-202ENST00000597453 TSPEAR-AS2P59090 65 aa9.11□□□□□ -0.95
TGFB1-202ENST00000597453 NDUFA12Q9UI09 145 aa9.11□□□□□ -0.95
TGFB1-202ENST00000597453 SMIM13P0DJ93 91 aa9.1□□□□□ -0.95
TGFB1-202ENST00000597453 MRPL55Q7Z7F7 128 aaKnown RBP9.1□□□□□ -0.95
TGFB1-202ENST00000597453 CEND1Q8N111 149 aa9.1□□□□□ -0.95
TGFB1-202ENST00000597453 IGLV1-50A0A075B6I6 118 aa9.09□□□□□ -0.95
TGFB1-202ENST00000597453 MYMXA0A1B0GTQ4 84 aa9.09□□□□□ -0.95
TGFB1-202ENST00000597453 J3QQQ9 107 aa9.08□□□□□ -0.96
TGFB1-202ENST00000597453 K7EP34 96 aa9.08□□□□□ -0.96
TGFB1-202ENST00000597453 LINC00158P58513 81 aa9.08□□□□□ -0.96
TGFB1-202ENST00000597453 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
TGFB1-202ENST00000597453 VPREB1P12018 145 aa9.07□□□□□ -0.96
TGFB1-202ENST00000597453 NKAPP1Q8N9T2 125 aa9.07□□□□□ -0.96
TGFB1-202ENST00000597453 A0A1B0GWB2 263 aa9.06□□□□□ -0.96
TGFB1-202ENST00000597453 A0A1W2PPM0 123 aa9.06□□□□□ -0.96
TGFB1-202ENST00000597453 GAGE10A6NGK3 116 aa9.06□□□□□ -0.96
TGFB1-202ENST00000597453 LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
TGFB1-202ENST00000597453 FXYD2P54710 66 aa9.06□□□□□ -0.96
TGFB1-202ENST00000597453 LINC00167Q96N53 147 aa9.06□□□□□ -0.96
TGFB1-202ENST00000597453 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
TGFB1-202ENST00000597453 ZNF861PO60384 105 aa9.05□□□□□ -0.96
TGFB1-202ENST00000597453 FABP2P12104 132 aa9.05□□□□□ -0.96
TGFB1-202ENST00000597453 RPL24P83731 157 aaKnown RBP9.05□□□□□ -0.96
TGFB1-202ENST00000597453 CBY1Q9Y3M2 126 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms