RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 LINC00158P58513 81 aa9.08□□□□□ -0.96
LIG1-214ENST00000597146 LEPROTL1O95214 131 aa9.07□□□□□ -0.96
LIG1-214ENST00000597146 LINC01547P58512 204 aaPredicted RBP9.07□□□□□ -0.96
LIG1-214ENST00000597146 RPL24P83731 157 aaKnown RBP9.07□□□□□ -0.96
LIG1-214ENST00000597146 COX17Q14061 63 aa9.07□□□□□ -0.96
LIG1-214ENST00000597146 LINC00167Q96N53 147 aa9.07□□□□□ -0.96
LIG1-214ENST00000597146 A0A087X002 238 aa9.05□□□□□ -0.96
LIG1-214ENST00000597146 ZNF861PO60384 105 aa9.05□□□□□ -0.96
LIG1-214ENST00000597146 SERF1AO75920 110 aa9.05□□□□□ -0.96
LIG1-214ENST00000597146 FABP4P15090 132 aa9.05□□□□□ -0.96
LIG1-214ENST00000597146 RPL28P46779 137 aaKnown RBP9.05□□□□□ -0.96
LIG1-214ENST00000597146 HSPB8Q9UJY1 196 aa9.05□□□□□ -0.96
LIG1-214ENST00000597146 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
LIG1-214ENST00000597146 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
LIG1-214ENST00000597146 S100A1P23297 94 aa9.04□□□□□ -0.96
LIG1-214ENST00000597146 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
LIG1-214ENST00000597146 SND1-IT1Q9HBX3 110 aa9.04□□□□□ -0.96
LIG1-214ENST00000597146 BCE1O60756 84 aa9.03□□□□□ -0.96
LIG1-214ENST00000597146 UBE2AP49459 152 aa9.03□□□□□ -0.96
LIG1-214ENST00000597146 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
LIG1-214ENST00000597146 COLCA2A8K830 154 aa9.02□□□□□ -0.97
LIG1-214ENST00000597146 IGLV5-37A0A075B6J1 123 aa9.01□□□□□ -0.97
LIG1-214ENST00000597146 LINC00587B1AMM8 73 aa9.01□□□□□ -0.97
LIG1-214ENST00000597146 IGKV2-28A0A075B6P5 120 aa9□□□□□ -0.97
LIG1-214ENST00000597146 MYMXA0A1B0GTQ4 84 aa9□□□□□ -0.97
LIG1-214ENST00000597146 IGKV2D-28P01615 120 aa9□□□□□ -0.97
LIG1-214ENST00000597146 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
LIG1-214ENST00000597146 SCO1O75880 301 aa8.99□□□□□ -0.97
LIG1-214ENST00000597146 PLNP26678 52 aa8.99□□□□□ -0.97
LIG1-214ENST00000597146 HERVK_113P61574 105 aa8.99□□□□□ -0.97
LIG1-214ENST00000597146 HERV-K104P63124 156 aa8.99□□□□□ -0.97
LIG1-214ENST00000597146 TYMSOSQ8TAI1 123 aa8.99□□□□□ -0.97
LIG1-214ENST00000597146 IGLV7-46A0A075B6I9 117 aa8.98□□□□□ -0.97
LIG1-214ENST00000597146 DPM2O94777 84 aa8.98□□□□□ -0.97
LIG1-214ENST00000597146 SMIM13P0DJ93 91 aa8.98□□□□□ -0.97
LIG1-214ENST00000597146 NDUFA12Q9UI09 145 aa8.98□□□□□ -0.97
LIG1-214ENST00000597146 CRYGAP11844 174 aa8.97□□□□□ -0.97
LIG1-214ENST00000597146 PLEKHB2Q96CS7 222 aa8.97□□□□□ -0.97
LIG1-214ENST00000597146 KRTAP4-1Q9BYQ7 146 aa8.97□□□□□ -0.97
LIG1-214ENST00000597146 VPREB1P12018 145 aa8.96□□□□□ -0.98
LIG1-214ENST00000597146 FAM19A1Q7Z5A9 133 aa8.96□□□□□ -0.98
LIG1-214ENST00000597146 LEPROTO15243 131 aa8.95□□□□□ -0.98
LIG1-214ENST00000597146 IGKCP01834 107 aa8.95□□□□□ -0.98
LIG1-214ENST00000597146 LGALS3P17931 250 aaKnown RBP8.95□□□□□ -0.98
LIG1-214ENST00000597146 PMCHL2Q9BQD1 86 aa8.95□□□□□ -0.98
LIG1-214ENST00000597146 M0R378 163 aa8.94□□□□□ -0.98
LIG1-214ENST00000597146 LINC00310P59036 64 aa8.94□□□□□ -0.98
LIG1-214ENST00000597146 BOD1L2Q8IYS8 172 aa8.94□□□□□ -0.98
LIG1-214ENST00000597146 S100A12P80511 92 aa8.93□□□□□ -0.98
LIG1-214ENST00000597146 MIR7-3HGQ8N6C7 128 aa8.93□□□□□ -0.98
LIG1-214ENST00000597146 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
LIG1-214ENST00000597146 TMEM238C9JI98 176 aa8.92□□□□□ -0.98
LIG1-214ENST00000597146 J3QQQ9 107 aa8.92□□□□□ -0.98
LIG1-214ENST00000597146 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
LIG1-214ENST00000597146 TMEM126AQ9H061 195 aa8.92□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BKO60814 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BJP06899 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BOP23527 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BBP33778 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BDP58876 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BCP62807 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 PRLHP81277 87 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST2H2BEQ16778 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.9□□□□□ -0.98
LIG1-214ENST00000597146 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BHQ93079 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BNQ99877 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 HIST1H2BMQ99879 126 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 MIEN1Q9BRT3 115 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 PPDPFQ9H3Y8 114 aa8.9□□□□□ -0.98
LIG1-214ENST00000597146 KRTAP9-7A8MTY7 169 aa8.89□□□□□ -0.99
LIG1-214ENST00000597146 NCR3O14931 201 aa8.89□□□□□ -0.99
LIG1-214ENST00000597146 NMUP48645 174 aa8.89□□□□□ -0.99
LIG1-214ENST00000597146 SYS1-DBNDD2H3BUS1 97 aa8.87□□□□□ -0.99
LIG1-214ENST00000597146 ASB16-AS1Q495Z4 193 aa8.87□□□□□ -0.99
LIG1-214ENST00000597146 HIGD2AQ9BW72 106 aa8.87□□□□□ -0.99
LIG1-214ENST00000597146 IGKV2D-26A0A0A0MRZ7 120 aa8.86□□□□□ -0.99
LIG1-214ENST00000597146 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
LIG1-214ENST00000597146 DAND5Q8N907 189 aa8.86□□□□□ -0.99
LIG1-214ENST00000597146 Q8NDZ9 215 aa8.86□□□□□ -0.99
LIG1-214ENST00000597146 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
LIG1-214ENST00000597146 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
LIG1-214ENST00000597146 PET117Q6UWS5 81 aa8.84□□□□□ -0.99
LIG1-214ENST00000597146 KRTAP13-1Q8IUC0 172 aa8.84□□□□□ -0.99
LIG1-214ENST00000597146 PRYO14603 147 aa8.83□□□□□ -1
LIG1-214ENST00000597146 KRTDAPP60985 99 aa8.83□□□□□ -1
LIG1-214ENST00000597146 S100A7L2Q5SY68 101 aa8.83□□□□□ -1
LIG1-214ENST00000597146 E9PLD3 99 aa8.82□□□□□ -1
LIG1-214ENST00000597146 FAM229BQ4G0N7 80 aa8.82□□□□□ -1
LIG1-214ENST00000597146 TRBV10-3A0A0K0K1G6 114 aa8.81□□□□□ -1
LIG1-214ENST00000597146 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.81□□□□□ -1
LIG1-214ENST00000597146 NPC2P61916 151 aa8.81□□□□□ -1
LIG1-214ENST00000597146 ZNF706Q9Y5V0 76 aaPredicted RBP8.81□□□□□ -1
LIG1-214ENST00000597146 C20orf202A1L168 122 aa8.8□□□□□ -1
LIG1-214ENST00000597146 DDTP30046 118 aa8.8□□□□□ -1
LIG1-214ENST00000597146 KCNQ1DNQ9H478 68 aa8.8□□□□□ -1
LIG1-214ENST00000597146 A0A0J9YXY3 114 aa8.79□□□□□ -1
LIG1-214ENST00000597146 LINC01545Q5VT33 79 aa8.79□□□□□ -1
LIG1-214ENST00000597146 LINC00337Q8N6G1 96 aa8.79□□□□□ -1
LIG1-214ENST00000597146 TRBV10-2A0A0K0K1G8 114 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms