RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 MAP1LC3CQ9BXW4 147 aa9.24□□□□□ -0.93
PPFIA4-208ENST00000597023 A0A087X002 238 aa9.23□□□□□ -0.93
PPFIA4-208ENST00000597023 UBE2AP49459 152 aa9.23□□□□□ -0.93
PPFIA4-208ENST00000597023 LINC00158P58513 81 aa9.23□□□□□ -0.93
PPFIA4-208ENST00000597023 Q8NDZ9 215 aa9.23□□□□□ -0.93
PPFIA4-208ENST00000597023 A0A0U1RRA0 63 aa9.22□□□□□ -0.93
PPFIA4-208ENST00000597023 TSPAN13O95857 204 aa9.22□□□□□ -0.93
PPFIA4-208ENST00000597023 VPREB1P12018 145 aa9.22□□□□□ -0.93
PPFIA4-208ENST00000597023 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
PPFIA4-208ENST00000597023 MYMXA0A1B0GTQ4 84 aa9.21□□□□□ -0.94
PPFIA4-208ENST00000597023 FAM19A2Q8N3H0 131 aa9.21□□□□□ -0.94
PPFIA4-208ENST00000597023 TMEM238C9JI98 176 aa9.2□□□□□ -0.94
PPFIA4-208ENST00000597023 HERVK_113P61574 105 aa9.2□□□□□ -0.94
PPFIA4-208ENST00000597023 PRLHP81277 87 aa9.2□□□□□ -0.94
PPFIA4-208ENST00000597023 PRR4Q16378 134 aa9.2□□□□□ -0.94
PPFIA4-208ENST00000597023 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
PPFIA4-208ENST00000597023 SLC7A5P1Q8MH63 180 aa9.2□□□□□ -0.94
PPFIA4-208ENST00000597023 SERF1AO75920 110 aa9.19□□□□□ -0.94
PPFIA4-208ENST00000597023 S100A12P80511 92 aa9.19□□□□□ -0.94
PPFIA4-208ENST00000597023 FAM19A1Q7Z5A9 133 aa9.19□□□□□ -0.94
PPFIA4-208ENST00000597023 PLEKHB2Q96CS7 222 aa9.19□□□□□ -0.94
PPFIA4-208ENST00000597023 COLCA2A8K830 154 aa9.18□□□□□ -0.94
PPFIA4-208ENST00000597023 CRYGAP11844 174 aa9.18□□□□□ -0.94
PPFIA4-208ENST00000597023 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
PPFIA4-208ENST00000597023 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
PPFIA4-208ENST00000597023 H0Y8G0 127 aa9.17□□□□□ -0.94
PPFIA4-208ENST00000597023 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
PPFIA4-208ENST00000597023 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
PPFIA4-208ENST00000597023 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
PPFIA4-208ENST00000597023 M0R378 163 aa9.16□□□□□ -0.94
PPFIA4-208ENST00000597023 DPM2O94777 84 aa9.16□□□□□ -0.94
PPFIA4-208ENST00000597023 NMUP48645 174 aa9.16□□□□□ -0.94
PPFIA4-208ENST00000597023 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
PPFIA4-208ENST00000597023 KRTAP13-2Q52LG2 175 aa9.15□□□□□ -0.94
PPFIA4-208ENST00000597023 LEPROTO15243 131 aa9.14□□□□□ -0.95
PPFIA4-208ENST00000597023 IGKCP01834 107 aa9.13□□□□□ -0.95
PPFIA4-208ENST00000597023 FABP4P15090 132 aa9.13□□□□□ -0.95
PPFIA4-208ENST00000597023 FAM229BQ4G0N7 80 aa9.13□□□□□ -0.95
PPFIA4-208ENST00000597023 LINC00310P59036 64 aa9.12□□□□□ -0.95
PPFIA4-208ENST00000597023 CTAG1AP78358 180 aa9.12□□□□□ -0.95
PPFIA4-208ENST00000597023 J3QQQ9 107 aa9.11□□□□□ -0.95
PPFIA4-208ENST00000597023 LGALS3P17931 250 aaKnown RBP9.11□□□□□ -0.95
PPFIA4-208ENST00000597023 BOD1L2Q8IYS8 172 aa9.11□□□□□ -0.95
PPFIA4-208ENST00000597023 MIR7-3HGQ8N6C7 128 aa9.11□□□□□ -0.95
PPFIA4-208ENST00000597023 MIEN1Q9BRT3 115 aa9.11□□□□□ -0.95
PPFIA4-208ENST00000597023 NCR3O14931 201 aa9.1□□□□□ -0.95
PPFIA4-208ENST00000597023 HIGD2AQ9BW72 106 aa9.1□□□□□ -0.95
PPFIA4-208ENST00000597023 CBY1Q9Y3M2 126 aa9.09□□□□□ -0.95
PPFIA4-208ENST00000597023 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
PPFIA4-208ENST00000597023 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
PPFIA4-208ENST00000597023 PRYO14603 147 aa9.08□□□□□ -0.96
PPFIA4-208ENST00000597023 TSPEAR-AS2P59090 65 aa9.08□□□□□ -0.96
PPFIA4-208ENST00000597023 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
PPFIA4-208ENST00000597023 PMCHL2Q9BQD1 86 aa9.08□□□□□ -0.96
PPFIA4-208ENST00000597023 TRBV10-2A0A0K0K1G8 114 aa9.07□□□□□ -0.96
PPFIA4-208ENST00000597023 AKR1D1P51857 326 aa9.07□□□□□ -0.96
PPFIA4-208ENST00000597023 RETNLBQ9BQ08 111 aa9.07□□□□□ -0.96
PPFIA4-208ENST00000597023 KCNQ1DNQ9H478 68 aa9.07□□□□□ -0.96
PPFIA4-208ENST00000597023 C3orf22Q8N5N4 141 aa9.06□□□□□ -0.96
PPFIA4-208ENST00000597023 LINC00337Q8N6G1 96 aa9.06□□□□□ -0.96
PPFIA4-208ENST00000597023 DAND5Q8N907 189 aa9.06□□□□□ -0.96
PPFIA4-208ENST00000597023 LINC00304Q8N9R0 145 aa9.06□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BKO60814 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BJP06899 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BOP23527 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BBP33778 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BDP58876 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BCP62807 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST2H2BEQ16778 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 PET117Q6UWS5 81 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BHQ93079 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BNQ99877 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 HIST1H2BMQ99879 126 aa9.05□□□□□ -0.96
PPFIA4-208ENST00000597023 ETDCA0A1B0GVM5 59 aa9.04□□□□□ -0.96
PPFIA4-208ENST00000597023 E9PLD3 99 aa9.04□□□□□ -0.96
PPFIA4-208ENST00000597023 SYS1-DBNDD2H3BUS1 97 aa9.04□□□□□ -0.96
PPFIA4-208ENST00000597023 NDUFC2O95298 119 aa9.04□□□□□ -0.96
PPFIA4-208ENST00000597023 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
PPFIA4-208ENST00000597023 TRBV10-3A0A0K0K1G6 114 aa9.02□□□□□ -0.97
PPFIA4-208ENST00000597023 SPRR1AP35321 89 aa9.01□□□□□ -0.97
PPFIA4-208ENST00000597023 S100A7L2Q5SY68 101 aa9.01□□□□□ -0.97
PPFIA4-208ENST00000597023 SPRR4Q96PI1 79 aa9.01□□□□□ -0.97
PPFIA4-208ENST00000597023 C20orf202A1L168 122 aa9□□□□□ -0.97
PPFIA4-208ENST00000597023 DDTP30046 118 aa9□□□□□ -0.97
PPFIA4-208ENST00000597023 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
PPFIA4-208ENST00000597023 LINC01545Q5VT33 79 aa9□□□□□ -0.97
PPFIA4-208ENST00000597023 SPAG11AQ6PDA7 123 aa9□□□□□ -0.97
PPFIA4-208ENST00000597023 SMCR5Q8TEV8 140 aa9□□□□□ -0.97
PPFIA4-208ENST00000597023 PPDPFQ9H3Y8 114 aa9□□□□□ -0.97
PPFIA4-208ENST00000597023 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
PPFIA4-208ENST00000597023 COA6Q5JTJ3 125 aaKnown RBP8.99□□□□□ -0.97
PPFIA4-208ENST00000597023 COPS9Q8WXC6 57 aa8.99□□□□□ -0.97
PPFIA4-208ENST00000597023 TIMM17BO60830 172 aa8.98□□□□□ -0.97
PPFIA4-208ENST00000597023 A0A0J9YXY3 114 aa8.97□□□□□ -0.97
PPFIA4-208ENST00000597023 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
PPFIA4-208ENST00000597023 NPC2P61916 151 aa8.97□□□□□ -0.97
PPFIA4-208ENST00000597023 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
PPFIA4-208ENST00000597023 C5orf52A6NGY3 159 aa8.94□□□□□ -0.98
PPFIA4-208ENST00000597023 B5MCH6 92 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms