RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 HIGD2BQ4VC39 106 aa15.21■□□□□ 0.03
SRRM1-222ENST00000596378 C14orf132Q9NPU4 83 aa15.21■□□□□ 0.03
SRRM1-222ENST00000596378 C6orf48Q9UBA6 75 aa15.21■□□□□ 0.03
SRRM1-222ENST00000596378 ACYP1P07311 99 aa15.21■□□□□ 0.02
SRRM1-222ENST00000596378 S100A7L2Q5SY68 101 aa15.2■□□□□ 0.02
SRRM1-222ENST00000596378 C6orf99Q4VX62 202 aa15.19■□□□□ 0.02
SRRM1-222ENST00000596378 ANAPC13Q9BS18 74 aa15.18■□□□□ 0.02
SRRM1-222ENST00000596378 ORMDL1Q9P0S3 153 aa15.18■□□□□ 0.02
SRRM1-222ENST00000596378 DEFB131BA0A096LNP1 70 aa15.17■□□□□ 0.02
SRRM1-222ENST00000596378 RPL18AQ02543 176 aaKnown RBP15.17■□□□□ 0.02
SRRM1-222ENST00000596378 XAGE1AQ9HD64 81 aa15.17■□□□□ 0.02
SRRM1-222ENST00000596378 PRB2P02812 416 aaPredicted RBP15.17■□□□□ 0.02
SRRM1-222ENST00000596378 KRTAP26-1Q6PEX3 210 aa15.17■□□□□ 0.02
SRRM1-222ENST00000596378 Q6Q795 121 aa15.17■□□□□ 0.02
SRRM1-222ENST00000596378 Q8N814 137 aa15.17■□□□□ 0.02
SRRM1-222ENST00000596378 C11orf45Q8TAV5 145 aa15.16■□□□□ 0.02
SRRM1-222ENST00000596378 NDUFV3P56181 108 aaKnown RBP15.15■□□□□ 0.02
SRRM1-222ENST00000596378 OBSCN-AS1Q96MR7 158 aa15.15■□□□□ 0.02
SRRM1-222ENST00000596378 GVQW2A0A096LPI5 108 aaPredicted RBP15.14■□□□□ 0.01
SRRM1-222ENST00000596378 NHLRC4P0CG21 123 aaPredicted RBP15.14■□□□□ 0.01
SRRM1-222ENST00000596378 COL6A5A8TX70 2615 aa15.14■□□□□ 0.01
SRRM1-222ENST00000596378 LINC00167Q96N53 147 aa15.14■□□□□ 0.01
SRRM1-222ENST00000596378 BAHCC1Q9P281 2608 aa15.13■□□□□ 0.01
SRRM1-222ENST00000596378 ZNF561-AS1K7EIQ3 104 aa15.13■□□□□ 0.01
SRRM1-222ENST00000596378 CAMK2N2Q96S95 79 aa15.12■□□□□ 0.01
SRRM1-222ENST00000596378 MUC7Q8TAX7 377 aa15.11■□□□□ 0.01
SRRM1-222ENST00000596378 C15orf56Q8N910 161 aa15.11■□□□□ 0.01
SRRM1-222ENST00000596378 TRBV7-7A0A0K0K1E9 115 aa15.1■□□□□ 0.01
SRRM1-222ENST00000596378 SDIM1Q6ZPB5 146 aa15.1■□□□□ 0.01
SRRM1-222ENST00000596378 NBEAL1Q6ZS30 2694 aa15.1■□□□□ 0.01
SRRM1-222ENST00000596378 IGLV6-57P01721 117 aa15.09■□□□□ 0.01
SRRM1-222ENST00000596378 Q6ZRU5 148 aa15.09■□□□□ 0.01
SRRM1-222ENST00000596378 LINC00643Q86TS7 51 aa15.09■□□□□ 0.01
SRRM1-222ENST00000596378 A0A1B0GX51 115 aa15.08■□□□□ 0
SRRM1-222ENST00000596378 TRBV10-3A0A0K0K1G6 114 aa15.07■□□□□ 0
SRRM1-222ENST00000596378 IGKV2D-24A0A075B6R9 120 aa15.06■□□□□ 0
SRRM1-222ENST00000596378 LINC00575Q6W349 94 aa15.06■□□□□ 0
SRRM1-222ENST00000596378 C1orf43Q9BWL3 253 aa15.06■□□□□ 0
SRRM1-222ENST00000596378 LINC01556Q5JQF7 62 aa15.06■□□□□ 0
SRRM1-222ENST00000596378 MRAPQ8TCY5 172 aa15.03■□□□□ -0
SRRM1-222ENST00000596378 LINC00846Q9NV44 126 aa15.03■□□□□ -0
SRRM1-222ENST00000596378 HUWE1Q7Z6Z7 4374 aaKnown RBP15.02■□□□□ -0
SRRM1-222ENST00000596378 TMEM256-PLSCR3K7ERE1 68 aa15.02■□□□□ -0
SRRM1-222ENST00000596378 hADV29S1A0JD25 119 aa15.01□□□□□ -0.01
SRRM1-222ENST00000596378 TRAV23DV6A0A075B6W5 121 aa15□□□□□ -0.01
SRRM1-222ENST00000596378 VPREB1P12018 145 aa14.99□□□□□ -0.01
SRRM1-222ENST00000596378 FAM236AA0A1B0GUQ0 79 aa14.98□□□□□ -0.01
SRRM1-222ENST00000596378 FAM236BA0A1B0GV22 79 aa14.98□□□□□ -0.01
SRRM1-222ENST00000596378 C2orf48Q96LS8 159 aa14.97□□□□□ -0.01
SRRM1-222ENST00000596378 IMUPQ9GZP8 106 aa14.97□□□□□ -0.01
SRRM1-222ENST00000596378 NDUFC2-KCTD14E9PQ53 114 aa14.97□□□□□ -0.01
SRRM1-222ENST00000596378 JMJD7-PLA2G4BH0Y9G9 81 aa14.96□□□□□ -0.01
SRRM1-222ENST00000596378 CCDC179H3BU77 68 aa14.96□□□□□ -0.01
SRRM1-222ENST00000596378 CCKP06307 115 aa14.96□□□□□ -0.01
SRRM1-222ENST00000596378 Q6ZRP5 223 aa14.96□□□□□ -0.01
SRRM1-222ENST00000596378 DNAH10OSP0CZ25 163 aa14.95□□□□□ -0.02
SRRM1-222ENST00000596378 DIRC1Q969H9 104 aa14.95□□□□□ -0.02
SRRM1-222ENST00000596378 LINC00588Q9Y4M8 146 aa14.95□□□□□ -0.02
SRRM1-222ENST00000596378 K7EIL1 84 aa14.94□□□□□ -0.02
SRRM1-222ENST00000596378 ZNF73O43830 326 aaPredicted RBP14.94□□□□□ -0.02
SRRM1-222ENST00000596378 Q6ZQY7 126 aa14.94□□□□□ -0.02
SRRM1-222ENST00000596378 TRAV10A0A0B4J240 114 aa14.94□□□□□ -0.02
SRRM1-222ENST00000596378 DNAH1Q9P2D7 4330 aa14.93□□□□□ -0.02
SRRM1-222ENST00000596378 IGKV3D-7A0A0C4DH55 119 aa14.93□□□□□ -0.02
SRRM1-222ENST00000596378 TM2D3Q9BRN9 247 aa14.93□□□□□ -0.02
SRRM1-222ENST00000596378 SYCNQ0VAF6 134 aa14.91□□□□□ -0.02
SRRM1-222ENST00000596378 CASC10Q5T4H9 136 aa14.9□□□□□ -0.02
SRRM1-222ENST00000596378 M0R378 163 aa14.89□□□□□ -0.03
SRRM1-222ENST00000596378 LAMTOR3Q9UHA4 124 aa14.89□□□□□ -0.03
SRRM1-222ENST00000596378 B5MCH6 92 aa14.88□□□□□ -0.03
SRRM1-222ENST00000596378 COX7BP24311 80 aa14.88□□□□□ -0.03
SRRM1-222ENST00000596378 MGAM2Q2M2H8 2515 aa14.88□□□□□ -0.03
SRRM1-222ENST00000596378 ELOF1P60002 83 aaKnown RBP14.87□□□□□ -0.03
SRRM1-222ENST00000596378 Q6JHZ5 121 aa14.86□□□□□ -0.03
SRRM1-222ENST00000596378 LYSTQ99698 3801 aa14.85□□□□□ -0.03
SRRM1-222ENST00000596378 RBM3P98179 157 aaKnown RBP14.85□□□□□ -0.03
SRRM1-222ENST00000596378 SERTAD4-AS1Q5TG53 156 aa14.83□□□□□ -0.04
SRRM1-222ENST00000596378 M0R2N4 97 aa14.82□□□□□ -0.04
SRRM1-222ENST00000596378 COL7A1Q02388 2944 aa14.82□□□□□ -0.04
SRRM1-222ENST00000596378 USP17L23D6RBM5 183 aa14.82□□□□□ -0.04
SRRM1-222ENST00000596378 Q6ZQT0 140 aa14.82□□□□□ -0.04
SRRM1-222ENST00000596378 A0A087WVE0 104 aa14.81□□□□□ -0.04
SRRM1-222ENST00000596378 F8WDY8 70 aa14.8□□□□□ -0.04
SRRM1-222ENST00000596378 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.78□□□□□ -0.04
SRRM1-222ENST00000596378 TRBV7-6A0A0J9YX20 115 aa14.78□□□□□ -0.04
SRRM1-222ENST00000596378 LINC00528Q8N1L1 170 aa14.78□□□□□ -0.04
SRRM1-222ENST00000596378 NKAPP1Q8N9T2 125 aa14.77□□□□□ -0.05
SRRM1-222ENST00000596378 LOC110117498A0A087WWA1 95 aa14.76□□□□□ -0.05
SRRM1-222ENST00000596378 SS18L2Q9UHA2 77 aa14.76□□□□□ -0.05
SRRM1-222ENST00000596378 C7orf33Q8WU49 177 aa14.76□□□□□ -0.05
SRRM1-222ENST00000596378 STAB2Q8WWQ8 2551 aa14.76□□□□□ -0.05
SRRM1-222ENST00000596378 FAM168BA1KXE4 195 aa14.75□□□□□ -0.05
SRRM1-222ENST00000596378 HIST1H4AP62805 103 aaKnown RBP14.75□□□□□ -0.05
SRRM1-222ENST00000596378 DSCR8Q96T75 97 aa14.75□□□□□ -0.05
SRRM1-222ENST00000596378 DNAH10Q8IVF4 4471 aa14.75□□□□□ -0.05
SRRM1-222ENST00000596378 TLX1NBP0CAT3 122 aa14.71□□□□□ -0.05
SRRM1-222ENST00000596378 UBL5Q9BZL1 73 aa14.71□□□□□ -0.05
SRRM1-222ENST00000596378 DNAH9Q9NYC9 4486 aa14.7□□□□□ -0.06
SRRM1-222ENST00000596378 RPL37AP8A6NKH3 93 aa14.7□□□□□ -0.06
SRRM1-222ENST00000596378 H3BQ85 93 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms