RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
SHKBP1-208ENST00000595726 A0A087X002 238 aa8.03□□□□□ -1.12
SHKBP1-208ENST00000595726 SERF1AO75920 110 aa8.03□□□□□ -1.12
SHKBP1-208ENST00000595726 LINC01547P58512 204 aaPredicted RBP8.03□□□□□ -1.12
SHKBP1-208ENST00000595726 LBHQ53QV2 105 aaPredicted RBP8.03□□□□□ -1.12
SHKBP1-208ENST00000595726 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
SHKBP1-208ENST00000595726 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
SHKBP1-208ENST00000595726 PFN2P35080 140 aa8.02□□□□□ -1.13
SHKBP1-208ENST00000595726 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
SHKBP1-208ENST00000595726 NUPR1O60356 82 aa8.01□□□□□ -1.13
SHKBP1-208ENST00000595726 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
SHKBP1-208ENST00000595726 ZNF625Q96I27 306 aaPredicted RBP8.01□□□□□ -1.13
SHKBP1-208ENST00000595726 LEPROTL1O95214 131 aa8□□□□□ -1.13
SHKBP1-208ENST00000595726 COX17Q14061 63 aa8□□□□□ -1.13
SHKBP1-208ENST00000595726 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
SHKBP1-208ENST00000595726 LINC00167Q96N53 147 aa8□□□□□ -1.13
SHKBP1-208ENST00000595726 H0Y8G0 127 aa7.99□□□□□ -1.13
SHKBP1-208ENST00000595726 TPRXLQ17RH7 258 aa7.99□□□□□ -1.13
SHKBP1-208ENST00000595726 SND1-IT1Q9HBX3 110 aa7.99□□□□□ -1.13
SHKBP1-208ENST00000595726 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
SHKBP1-208ENST00000595726 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
SHKBP1-208ENST00000595726 ZNF861PO60384 105 aa7.98□□□□□ -1.13
SHKBP1-208ENST00000595726 NKAPP1Q8N9T2 125 aa7.98□□□□□ -1.13
SHKBP1-208ENST00000595726 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
SHKBP1-208ENST00000595726 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
SHKBP1-208ENST00000595726 VPREB1P12018 145 aa7.97□□□□□ -1.13
SHKBP1-208ENST00000595726 KRTAP4-1Q9BYQ7 146 aa7.97□□□□□ -1.13
SHKBP1-208ENST00000595726 BCE1O60756 84 aa7.96□□□□□ -1.14
SHKBP1-208ENST00000595726 GHRHP01286 108 aa7.96□□□□□ -1.14
SHKBP1-208ENST00000595726 HSPB8Q9UJY1 196 aa7.96□□□□□ -1.14
SHKBP1-208ENST00000595726 CRYGAP11844 174 aa7.95□□□□□ -1.14
SHKBP1-208ENST00000595726 FABP4P15090 132 aa7.95□□□□□ -1.14
SHKBP1-208ENST00000595726 Q8NDZ9 215 aa7.95□□□□□ -1.14
SHKBP1-208ENST00000595726 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
SHKBP1-208ENST00000595726 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
SHKBP1-208ENST00000595726 LINC00158P58513 81 aa7.94□□□□□ -1.14
SHKBP1-208ENST00000595726 A0A0U1RRA0 63 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BKO60814 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BJP06899 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BOP23527 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 PLNP26678 52 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BBP33778 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BDP58876 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BCP62807 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST2H2BEQ16778 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BHQ93079 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BNQ99877 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 HIST1H2BMQ99879 126 aa7.93□□□□□ -1.14
SHKBP1-208ENST00000595726 SMIM13P0DJ93 91 aa7.92□□□□□ -1.14
SHKBP1-208ENST00000595726 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
SHKBP1-208ENST00000595726 TSPEAR-AS2P59090 65 aa7.92□□□□□ -1.14
SHKBP1-208ENST00000595726 HERV-K104P63124 156 aa7.92□□□□□ -1.14
SHKBP1-208ENST00000595726 PMCHL2Q9BQD1 86 aa7.92□□□□□ -1.14
SHKBP1-208ENST00000595726 NDUFA12Q9UI09 145 aa7.92□□□□□ -1.14
SHKBP1-208ENST00000595726 DPM2O94777 84 aa7.91□□□□□ -1.14
SHKBP1-208ENST00000595726 MEIG1Q5JSS6 88 aa7.91□□□□□ -1.14
SHKBP1-208ENST00000595726 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
SHKBP1-208ENST00000595726 LEPROTO15243 131 aa7.9□□□□□ -1.14
SHKBP1-208ENST00000595726 IGKCP01834 107 aa7.9□□□□□ -1.14
SHKBP1-208ENST00000595726 MAP1LC3CQ9BXW4 147 aa7.9□□□□□ -1.14
SHKBP1-208ENST00000595726 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.14
SHKBP1-208ENST00000595726 MYMXA0A1B0GTQ4 84 aa7.89□□□□□ -1.15
SHKBP1-208ENST00000595726 S100A6P06703 90 aa7.89□□□□□ -1.15
SHKBP1-208ENST00000595726 UBE2AP49459 152 aa7.89□□□□□ -1.15
SHKBP1-208ENST00000595726 MIR7-3HGQ8N6C7 128 aa7.89□□□□□ -1.15
SHKBP1-208ENST00000595726 PLEKHB2Q96CS7 222 aa7.89□□□□□ -1.15
SHKBP1-208ENST00000595726 TMEM126AQ9H061 195 aa7.89□□□□□ -1.15
SHKBP1-208ENST00000595726 TMEM238C9JI98 176 aa7.88□□□□□ -1.15
SHKBP1-208ENST00000595726 HERVK_113P61574 105 aa7.88□□□□□ -1.15
SHKBP1-208ENST00000595726 LINC00304Q8N9R0 145 aa7.88□□□□□ -1.15
SHKBP1-208ENST00000595726 LINC00587B1AMM8 73 aa7.87□□□□□ -1.15
SHKBP1-208ENST00000595726 J3QQQ9 107 aa7.87□□□□□ -1.15
SHKBP1-208ENST00000595726 M0R378 163 aa7.87□□□□□ -1.15
SHKBP1-208ENST00000595726 PRLHP81277 87 aa7.87□□□□□ -1.15
SHKBP1-208ENST00000595726 SYS1-DBNDD2H3BUS1 97 aa7.86□□□□□ -1.15
SHKBP1-208ENST00000595726 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
SHKBP1-208ENST00000595726 BOD1L2Q8IYS8 172 aa7.86□□□□□ -1.15
SHKBP1-208ENST00000595726 NMUP48645 174 aa7.85□□□□□ -1.15
SHKBP1-208ENST00000595726 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
SHKBP1-208ENST00000595726 FAM19A1Q7Z5A9 133 aa7.85□□□□□ -1.15
SHKBP1-208ENST00000595726 KRTAP9-7A8MTY7 169 aa7.84□□□□□ -1.15
SHKBP1-208ENST00000595726 NCR3O14931 201 aa7.84□□□□□ -1.15
SHKBP1-208ENST00000595726 LGALS3P17931 250 aaKnown RBP7.84□□□□□ -1.15
SHKBP1-208ENST00000595726 DAND5Q8N907 189 aa7.84□□□□□ -1.15
SHKBP1-208ENST00000595726 IGKV2D-26A0A0A0MRZ7 120 aa7.83□□□□□ -1.16
SHKBP1-208ENST00000595726 E9PLD3 99 aa7.83□□□□□ -1.16
SHKBP1-208ENST00000595726 COA6Q5JTJ3 125 aaKnown RBP7.83□□□□□ -1.16
SHKBP1-208ENST00000595726 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
SHKBP1-208ENST00000595726 LINC01545Q5VT33 79 aa7.82□□□□□ -1.16
SHKBP1-208ENST00000595726 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
SHKBP1-208ENST00000595726 PRYO14603 147 aa7.81□□□□□ -1.16
SHKBP1-208ENST00000595726 PET117Q6UWS5 81 aa7.81□□□□□ -1.16
SHKBP1-208ENST00000595726 LINC00337Q8N6G1 96 aa7.81□□□□□ -1.16
SHKBP1-208ENST00000595726 C3orf79P0CE67 100 aa7.8□□□□□ -1.16
SHKBP1-208ENST00000595726 SVIPQ8NHG7 77 aa7.8□□□□□ -1.16
SHKBP1-208ENST00000595726 A0A0J9YXY3 114 aa7.79□□□□□ -1.16
SHKBP1-208ENST00000595726 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms