RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TMEM218A2RU14 115 aa9.29□□□□□ -0.92
LIG1-205ENST00000593425 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
LIG1-205ENST00000593425 SPAG11AQ6PDA7 123 aa9.29□□□□□ -0.92
LIG1-205ENST00000593425 PMCHL1Q16048 86 aa9.27□□□□□ -0.93
LIG1-205ENST00000593425 COX19Q49B96 90 aa9.27□□□□□ -0.93
LIG1-205ENST00000593425 FP248Q71RG6 208 aaPredicted RBP9.27□□□□□ -0.93
LIG1-205ENST00000593425 DAND5Q8N907 189 aa9.27□□□□□ -0.93
LIG1-205ENST00000593425 HBDP02042 147 aa9.26□□□□□ -0.93
LIG1-205ENST00000593425 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
LIG1-205ENST00000593425 TMEM170BQ5T4T1 132 aa9.26□□□□□ -0.93
LIG1-205ENST00000593425 UQCC3Q6UW78 93 aa9.26□□□□□ -0.93
LIG1-205ENST00000593425 A0A0U1RRA0 63 aa9.25□□□□□ -0.93
LIG1-205ENST00000593425 SFTA2Q6UW10 78 aa9.25□□□□□ -0.93
LIG1-205ENST00000593425 BAGE3Q86Y29 109 aa9.25□□□□□ -0.93
LIG1-205ENST00000593425 Q8NBF4 154 aa9.25□□□□□ -0.93
LIG1-205ENST00000593425 C18orf32Q8TCD1 76 aa9.25□□□□□ -0.93
LIG1-205ENST00000593425 LINC00614P0C842 121 aa9.24□□□□□ -0.93
LIG1-205ENST00000593425 LINC00158P58513 81 aa9.24□□□□□ -0.93
LIG1-205ENST00000593425 SEC11CQ9BY50 192 aa9.24□□□□□ -0.93
LIG1-205ENST00000593425 ZNF706Q9Y5V0 76 aaPredicted RBP9.24□□□□□ -0.93
LIG1-205ENST00000593425 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
LIG1-205ENST00000593425 PRYO14603 147 aa9.22□□□□□ -0.93
LIG1-205ENST00000593425 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
LIG1-205ENST00000593425 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
LIG1-205ENST00000593425 KRTAP4-1Q9BYQ7 146 aa9.22□□□□□ -0.93
LIG1-205ENST00000593425 SPRR1AP35321 89 aa9.21□□□□□ -0.94
LIG1-205ENST00000593425 NCR3O14931 201 aa9.2□□□□□ -0.94
LIG1-205ENST00000593425 SMCR5Q8TEV8 140 aa9.2□□□□□ -0.94
LIG1-205ENST00000593425 CHTOPQ9Y3Y2 248 aaKnown RBP9.2□□□□□ -0.94
LIG1-205ENST00000593425 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
LIG1-205ENST00000593425 SMIM13P0DJ93 91 aa9.19□□□□□ -0.94
LIG1-205ENST00000593425 BOD1L2Q8IYS8 172 aa9.19□□□□□ -0.94
LIG1-205ENST00000593425 TRAPPC1Q9Y5R8 145 aa9.19□□□□□ -0.94
LIG1-205ENST00000593425 TMEM223A0PJW6 202 aa9.18□□□□□ -0.94
LIG1-205ENST00000593425 IFITM2Q01629 132 aa9.18□□□□□ -0.94
LIG1-205ENST00000593425 KCNQ1DNQ9H478 68 aa9.18□□□□□ -0.94
LIG1-205ENST00000593425 RPS10P5Q9NQ39 176 aa9.18□□□□□ -0.94
LIG1-205ENST00000593425 SPINK1P00995 79 aa9.17□□□□□ -0.94
LIG1-205ENST00000593425 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
LIG1-205ENST00000593425 LINC01547P58512 204 aaPredicted RBP9.16□□□□□ -0.94
LIG1-205ENST00000593425 RHEBQ15382 184 aa9.16□□□□□ -0.94
LIG1-205ENST00000593425 MIR7-3HGQ8N6C7 128 aa9.16□□□□□ -0.94
LIG1-205ENST00000593425 TRBV10-3A0A0K0K1G6 114 aa9.15□□□□□ -0.94
LIG1-205ENST00000593425 ETDCA0A1B0GVM5 59 aa9.15□□□□□ -0.94
LIG1-205ENST00000593425 MEIG1Q5JSS6 88 aa9.15□□□□□ -0.94
LIG1-205ENST00000593425 C10orf91Q5T1B1 145 aa9.15□□□□□ -0.94
LIG1-205ENST00000593425 ATP6V1G1O75348 118 aa9.14□□□□□ -0.95
LIG1-205ENST00000593425 GAGE2AQ6NT46 116 aa9.14□□□□□ -0.95
LIG1-205ENST00000593425 COMMD7Q86VX2 200 aa9.14□□□□□ -0.95
LIG1-205ENST00000593425 ERC2-IT1O76042 136 aa9.13□□□□□ -0.95
LIG1-205ENST00000593425 SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
LIG1-205ENST00000593425 MOBPQ13875 183 aa9.13□□□□□ -0.95
LIG1-205ENST00000593425 IGLV9-49A0A0B4J1Y8 123 aa9.12□□□□□ -0.95
LIG1-205ENST00000593425 TRAV12-1A0A0B4J245 112 aa9.12□□□□□ -0.95
LIG1-205ENST00000593425 Q8N377 158 aa9.12□□□□□ -0.95
LIG1-205ENST00000593425 B5MCH6 92 aa9.11□□□□□ -0.95
LIG1-205ENST00000593425 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
LIG1-205ENST00000593425 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
LIG1-205ENST00000593425 RPS29P62273 56 aaKnown RBP9.1□□□□□ -0.95
LIG1-205ENST00000593425 HERV-K104P63124 156 aa9.1□□□□□ -0.95
LIG1-205ENST00000593425 NDUFA12Q9UI09 145 aa9.09□□□□□ -0.95
LIG1-205ENST00000593425 SSBP3-AS1Q7Z2R9 100 aa9.08□□□□□ -0.96
LIG1-205ENST00000593425 FAM19A2Q8N3H0 131 aa9.08□□□□□ -0.96
LIG1-205ENST00000593425 Q9BRP9 147 aa9.08□□□□□ -0.96
LIG1-205ENST00000593425 TSPEAR-AS2P59090 65 aa9.06□□□□□ -0.96
LIG1-205ENST00000593425 XP32Q5T750 250 aa9.06□□□□□ -0.96
LIG1-205ENST00000593425 CHCHD1Q96BP2 118 aaKnown RBP9.06□□□□□ -0.96
LIG1-205ENST00000593425 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
LIG1-205ENST00000593425 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
LIG1-205ENST00000593425 SLC25A20O43772 301 aa9.05□□□□□ -0.96
LIG1-205ENST00000593425 DDTP30046 118 aa9.05□□□□□ -0.96
LIG1-205ENST00000593425 S100A12P80511 92 aa9.05□□□□□ -0.96
LIG1-205ENST00000593425 Q6ZRX8 168 aa9.05□□□□□ -0.96
LIG1-205ENST00000593425 MAP1LC3CQ9BXW4 147 aa9.05□□□□□ -0.96
LIG1-205ENST00000593425 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
LIG1-205ENST00000593425 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
LIG1-205ENST00000593425 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
LIG1-205ENST00000593425 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
LIG1-205ENST00000593425 H0Y8G0 127 aa9.01□□□□□ -0.97
LIG1-205ENST00000593425 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
LIG1-205ENST00000593425 APOC3P02656 99 aa9□□□□□ -0.97
LIG1-205ENST00000593425 YPEL4Q96NS1 127 aa9□□□□□ -0.97
LIG1-205ENST00000593425 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
LIG1-205ENST00000593425 CRCT1Q9UGL9 99 aa9□□□□□ -0.97
LIG1-205ENST00000593425 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
LIG1-205ENST00000593425 LEPROTO15243 131 aa8.99□□□□□ -0.97
LIG1-205ENST00000593425 HSBP1O75506 76 aa8.99□□□□□ -0.97
LIG1-205ENST00000593425 KRTAP19-2Q3LHN2 52 aa8.99□□□□□ -0.97
LIG1-205ENST00000593425 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
LIG1-205ENST00000593425 TRAV23DV6A0A075B6W5 121 aa8.97□□□□□ -0.97
LIG1-205ENST00000593425 SNAPINO95295 136 aa8.97□□□□□ -0.97
LIG1-205ENST00000593425 S100A7L2Q5SY68 101 aa8.97□□□□□ -0.97
LIG1-205ENST00000593425 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
LIG1-205ENST00000593425 J3QQQ9 107 aa8.96□□□□□ -0.98
LIG1-205ENST00000593425 NDUFC2O95298 119 aa8.96□□□□□ -0.98
LIG1-205ENST00000593425 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.98
LIG1-205ENST00000593425 MIEN1Q9BRT3 115 aa8.96□□□□□ -0.98
LIG1-205ENST00000593425 EIF4EBP3O60516 100 aaPredicted RBP8.95□□□□□ -0.98
LIG1-205ENST00000593425 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
LIG1-205ENST00000593425 SVBPQ8N300 66 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms