RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 C14orf144Q96I85 54 aa6.11□□□□□ -1.43
DDX39A-220ENST00000593008 LITAFQ99732 161 aa6.11□□□□□ -1.43
DDX39A-220ENST00000593008 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
DDX39A-220ENST00000593008 A0A1W2PNN7 141 aa6.1□□□□□ -1.43
DDX39A-220ENST00000593008 HSBP1L1C9JCN9 74 aa6.1□□□□□ -1.43
DDX39A-220ENST00000593008 INAFM2P0DMQ5 153 aa6.1□□□□□ -1.43
DDX39A-220ENST00000593008 SERTAD4-AS1Q5TG53 156 aa6.1□□□□□ -1.43
DDX39A-220ENST00000593008 LINC00528Q8N1L1 170 aa6.1□□□□□ -1.43
DDX39A-220ENST00000593008 MIR7-3HGQ8N6C7 128 aa6.1□□□□□ -1.43
DDX39A-220ENST00000593008 CIRBP-AS1Q8TBR5 109 aa6.1□□□□□ -1.43
DDX39A-220ENST00000593008 TLX1NBP0CAT3 122 aa6.09□□□□□ -1.43
DDX39A-220ENST00000593008 LINC00158P58513 81 aa6.09□□□□□ -1.43
DDX39A-220ENST00000593008 SOSTDC1Q6X4U4 206 aa6.09□□□□□ -1.43
DDX39A-220ENST00000593008 FAM19A5Q7Z5A7 132 aaPredicted RBP6.09□□□□□ -1.43
DDX39A-220ENST00000593008 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
DDX39A-220ENST00000593008 COX8AP10176 69 aa6.08□□□□□ -1.44
DDX39A-220ENST00000593008 CIRBPQ14011 172 aaKnown RBP6.08□□□□□ -1.44
DDX39A-220ENST00000593008 COX17Q14061 63 aa6.08□□□□□ -1.44
DDX39A-220ENST00000593008 PRO1933Q9H354 126 aa6.08□□□□□ -1.44
DDX39A-220ENST00000593008 A0A087WYN8 130 aa6.07□□□□□ -1.44
DDX39A-220ENST00000593008 SMIM6P0DI80 62 aa6.07□□□□□ -1.44
DDX39A-220ENST00000593008 HERV-K104P63124 156 aa6.07□□□□□ -1.44
DDX39A-220ENST00000593008 C2orf91Q6ZV80 131 aa6.07□□□□□ -1.44
DDX39A-220ENST00000593008 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
DDX39A-220ENST00000593008 BOD1L2Q8IYS8 172 aa6.07□□□□□ -1.44
DDX39A-220ENST00000593008 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
DDX39A-220ENST00000593008 PLA2G1BP04054 148 aaKnown RBP6.06□□□□□ -1.44
DDX39A-220ENST00000593008 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
DDX39A-220ENST00000593008 SCGB1D4Q6XE38 83 aa6.06□□□□□ -1.44
DDX39A-220ENST00000593008 FLG2Q5D862 2391 aaPredicted RBP6.06□□□□□ -1.44
DDX39A-220ENST00000593008 PHF5AQ7RTV0 110 aaKnown RBP6.05□□□□□ -1.44
DDX39A-220ENST00000593008 GAGE10A6NGK3 116 aa6.04□□□□□ -1.44
DDX39A-220ENST00000593008 C7orf33Q8WU49 177 aa6.04□□□□□ -1.44
DDX39A-220ENST00000593008 C12orf57Q99622 126 aa6.04□□□□□ -1.44
DDX39A-220ENST00000593008 PLAC8Q9NZF1 115 aa6.04□□□□□ -1.44
DDX39A-220ENST00000593008 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
DDX39A-220ENST00000593008 NCR3O14931 201 aa6.03□□□□□ -1.44
DDX39A-220ENST00000593008 VPREB1P12018 145 aa6.03□□□□□ -1.44
DDX39A-220ENST00000593008 SLC25A34Q6PIV7 304 aa6.03□□□□□ -1.44
DDX39A-220ENST00000593008 LINC00308Q8TCZ7 52 aa6.03□□□□□ -1.44
DDX39A-220ENST00000593008 M0QXV9 152 aa6.02□□□□□ -1.45
DDX39A-220ENST00000593008 TIMM17BO60830 172 aa6.02□□□□□ -1.45
DDX39A-220ENST00000593008 LINC00518Q8N0U6 118 aa6.02□□□□□ -1.45
DDX39A-220ENST00000593008 COPS9Q8WXC6 57 aa6.02□□□□□ -1.45
DDX39A-220ENST00000593008 DLEU1O43261 78 aa6.01□□□□□ -1.45
DDX39A-220ENST00000593008 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
DDX39A-220ENST00000593008 RPL37AP61513 92 aaKnown RBP6.01□□□□□ -1.45
DDX39A-220ENST00000593008 S100A12P80511 92 aa6.01□□□□□ -1.45
DDX39A-220ENST00000593008 RPL24P83731 157 aaKnown RBP6.01□□□□□ -1.45
DDX39A-220ENST00000593008 LBHQ53QV2 105 aaPredicted RBP6.01□□□□□ -1.45
DDX39A-220ENST00000593008 MUSTN1Q8IVN3 82 aa6.01□□□□□ -1.45
DDX39A-220ENST00000593008 SPANXDQ9BXN6 97 aa6.01□□□□□ -1.45
DDX39A-220ENST00000593008 SPANXCQ9NY87 97 aa6.01□□□□□ -1.45
DDX39A-220ENST00000593008 TMEM238C9JI98 176 aa6□□□□□ -1.45
DDX39A-220ENST00000593008 C22orf24Q9Y442 160 aa6□□□□□ -1.45
DDX39A-220ENST00000593008 DMBT1Q9UGM3 2413 aaPredicted RBP6□□□□□ -1.45
DDX39A-220ENST00000593008 IGKV2-28A0A075B6P5 120 aa5.99□□□□□ -1.45
DDX39A-220ENST00000593008 RPL37AP8A6NKH3 93 aa5.99□□□□□ -1.45
DDX39A-220ENST00000593008 IGKV2D-28P01615 120 aa5.99□□□□□ -1.45
DDX39A-220ENST00000593008 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
DDX39A-220ENST00000593008 CBY1Q9Y3M2 126 aa5.99□□□□□ -1.45
DDX39A-220ENST00000593008 IGLV5-37A0A075B6J1 123 aa5.98□□□□□ -1.45
DDX39A-220ENST00000593008 LOC107984156A0A0G2JMH3 177 aa5.98□□□□□ -1.45
DDX39A-220ENST00000593008 HNRNPA3P51991 378 aaKnown RBP5.98□□□□□ -1.45
DDX39A-220ENST00000593008 ARL17AQ8IVW1 177 aa5.98□□□□□ -1.45
DDX39A-220ENST00000593008 LINC00167Q96N53 147 aa5.98□□□□□ -1.45
DDX39A-220ENST00000593008 MIEN1Q9BRT3 115 aa5.98□□□□□ -1.45
DDX39A-220ENST00000593008 UQCR10Q9UDW1 63 aa5.98□□□□□ -1.45
DDX39A-220ENST00000593008 PLA2G2DQ9UNK4 145 aa5.98□□□□□ -1.45
DDX39A-220ENST00000593008 HERC1Q15751 4861 aa5.97□□□□□ -1.45
DDX39A-220ENST00000593008 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
DDX39A-220ENST00000593008 MRPL55Q7Z7F7 128 aaKnown RBP5.97□□□□□ -1.45
DDX39A-220ENST00000593008 LINC00337Q8N6G1 96 aa5.97□□□□□ -1.45
DDX39A-220ENST00000593008 NKAPP1Q8N9T2 125 aa5.97□□□□□ -1.45
DDX39A-220ENST00000593008 HIST1H4GQ99525 98 aa5.97□□□□□ -1.45
DDX39A-220ENST00000593008 HIGD1BQ9P298 99 aa5.97□□□□□ -1.45
DDX39A-220ENST00000593008 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
DDX39A-220ENST00000593008 TRBV10-3A0A0K0K1G6 114 aa5.96□□□□□ -1.46
DDX39A-220ENST00000593008 A4D1N5 150 aa5.96□□□□□ -1.46
DDX39A-220ENST00000593008 FXYD2P54710 66 aa5.96□□□□□ -1.46
DDX39A-220ENST00000593008 Q6ZVH6 145 aa5.96□□□□□ -1.46
DDX39A-220ENST00000593008 J3QL48 77 aa5.95□□□□□ -1.46
DDX39A-220ENST00000593008 UBE2BP63146 152 aa5.95□□□□□ -1.46
DDX39A-220ENST00000593008 PSORS1C2Q9UIG4 136 aa5.95□□□□□ -1.46
DDX39A-220ENST00000593008 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
DDX39A-220ENST00000593008 K7ERJ3 54 aa5.94□□□□□ -1.46
DDX39A-220ENST00000593008 IGLV1-50A0A075B6I6 118 aa5.93□□□□□ -1.46
DDX39A-220ENST00000593008 M0R378 163 aa5.93□□□□□ -1.46
DDX39A-220ENST00000593008 NDUFC2O95298 119 aa5.93□□□□□ -1.46
DDX39A-220ENST00000593008 IFITM1P13164 125 aa5.93□□□□□ -1.46
DDX39A-220ENST00000593008 CTAG1AP78358 180 aa5.93□□□□□ -1.46
DDX39A-220ENST00000593008 HSD52Q0P140 79 aa5.93□□□□□ -1.46
DDX39A-220ENST00000593008 KRTAP29-1A8MX34 341 aaPredicted RBP5.92□□□□□ -1.46
DDX39A-220ENST00000593008 IGLV6-57P01721 117 aa5.92□□□□□ -1.46
DDX39A-220ENST00000593008 CEND1Q8N111 149 aa5.92□□□□□ -1.46
DDX39A-220ENST00000593008 TSTD3H0UI37 97 aa5.91□□□□□ -1.46
DDX39A-220ENST00000593008 DDTP30046 118 aa5.91□□□□□ -1.46
DDX39A-220ENST00000593008 HINT1P49773 126 aaPredicted RBP5.91□□□□□ -1.46
DDX39A-220ENST00000593008 C1orf137Q5JT78 98 aa5.91□□□□□ -1.46
DDX39A-220ENST00000593008 OR13C6PQ8NH95 151 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms