RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 M0QXV9 152 aa6.18□□□□□ -1.42
TPM4-216ENST00000592822 ANKRD39Q53RE8 183 aa6.18□□□□□ -1.42
TPM4-216ENST00000592822 MEIG1Q5JSS6 88 aa6.18□□□□□ -1.42
TPM4-216ENST00000592822 KRTAP11-1Q8IUC1 163 aa6.18□□□□□ -1.42
TPM4-216ENST00000592822 PLA2G2DQ9UNK4 145 aa6.18□□□□□ -1.42
TPM4-216ENST00000592822 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
TPM4-216ENST00000592822 LINC00587B1AMM8 73 aa6.17□□□□□ -1.42
TPM4-216ENST00000592822 AKR1D1P51857 326 aa6.17□□□□□ -1.42
TPM4-216ENST00000592822 MIR7-3HGQ8N6C7 128 aa6.17□□□□□ -1.42
TPM4-216ENST00000592822 TTTY13Q9BZ97 58 aa6.17□□□□□ -1.42
TPM4-216ENST00000592822 C22orf24Q9Y442 160 aa6.17□□□□□ -1.42
TPM4-216ENST00000592822 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
TPM4-216ENST00000592822 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
TPM4-216ENST00000592822 PRR3P79522 188 aaKnown RBP6.16□□□□□ -1.42
TPM4-216ENST00000592822 Q8NDZ9 215 aa6.16□□□□□ -1.42
TPM4-216ENST00000592822 ZNF815PA8K554 130 aa6.15□□□□□ -1.42
TPM4-216ENST00000592822 SCGB1D1O95968 90 aa6.15□□□□□ -1.42
TPM4-216ENST00000592822 INAFM2P0DMQ5 153 aa6.15□□□□□ -1.42
TPM4-216ENST00000592822 VPREB1P12018 145 aa6.15□□□□□ -1.42
TPM4-216ENST00000592822 HNRNPA3P51991 378 aaKnown RBP6.15□□□□□ -1.42
TPM4-216ENST00000592822 DAND5Q8N907 189 aa6.15□□□□□ -1.42
TPM4-216ENST00000592822 TP73-AS1Q9UF72 201 aa6.15□□□□□ -1.42
TPM4-216ENST00000592822 PSORS1C2Q9UIG4 136 aa6.15□□□□□ -1.42
TPM4-216ENST00000592822 LBHQ53QV2 105 aaPredicted RBP6.14□□□□□ -1.43
TPM4-216ENST00000592822 ADAMTSL4-AS1Q5T5F5 129 aa6.14□□□□□ -1.43
TPM4-216ENST00000592822 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
TPM4-216ENST00000592822 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
TPM4-216ENST00000592822 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
TPM4-216ENST00000592822 UBE2BP63146 152 aa6.13□□□□□ -1.43
TPM4-216ENST00000592822 RPL24P83731 157 aaKnown RBP6.13□□□□□ -1.43
TPM4-216ENST00000592822 PCP2Q8IVA1 136 aa6.13□□□□□ -1.43
TPM4-216ENST00000592822 NKAPP1Q8N9T2 125 aa6.13□□□□□ -1.43
TPM4-216ENST00000592822 LINC00167Q96N53 147 aa6.13□□□□□ -1.43
TPM4-216ENST00000592822 LITAFQ99732 161 aa6.13□□□□□ -1.43
TPM4-216ENST00000592822 LOC107984156A0A0G2JMH3 177 aa6.12□□□□□ -1.43
TPM4-216ENST00000592822 GAGE10A6NGK3 116 aa6.12□□□□□ -1.43
TPM4-216ENST00000592822 RPL37AP8A6NKH3 93 aa6.12□□□□□ -1.43
TPM4-216ENST00000592822 HSBP1L1C9JCN9 74 aa6.12□□□□□ -1.43
TPM4-216ENST00000592822 TIMM17BO60830 172 aa6.12□□□□□ -1.43
TPM4-216ENST00000592822 ARL17AQ8IVW1 177 aa6.12□□□□□ -1.43
TPM4-216ENST00000592822 BOD1L2Q8IYS8 172 aa6.12□□□□□ -1.43
TPM4-216ENST00000592822 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
TPM4-216ENST00000592822 C1orf137Q5JT78 98 aa6.11□□□□□ -1.43
TPM4-216ENST00000592822 SOSTDC1Q6X4U4 206 aa6.11□□□□□ -1.43
TPM4-216ENST00000592822 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
TPM4-216ENST00000592822 SRSF9Q13242 221 aaKnown RBP eCLIP6.1□□□□□ -1.43
TPM4-216ENST00000592822 JOSD1Q15040 202 aaPredicted RBP6.1□□□□□ -1.43
TPM4-216ENST00000592822 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
TPM4-216ENST00000592822 NCR3O14931 201 aa6.09□□□□□ -1.43
TPM4-216ENST00000592822 IGLV7-43P04211 117 aa6.09□□□□□ -1.43
TPM4-216ENST00000592822 NPC2P61916 151 aa6.09□□□□□ -1.43
TPM4-216ENST00000592822 SCGB1D4Q6XE38 83 aa6.09□□□□□ -1.43
TPM4-216ENST00000592822 IGKV2-28A0A075B6P5 120 aa6.08□□□□□ -1.44
TPM4-216ENST00000592822 M0R378 163 aa6.08□□□□□ -1.44
TPM4-216ENST00000592822 IGKV2D-28P01615 120 aa6.08□□□□□ -1.44
TPM4-216ENST00000592822 LINC00308Q8TCZ7 52 aa6.08□□□□□ -1.44
TPM4-216ENST00000592822 MIEN1Q9BRT3 115 aa6.08□□□□□ -1.44
TPM4-216ENST00000592822 PYY3Q5JQD4 70 aa6.07□□□□□ -1.44
TPM4-216ENST00000592822 SPINK6Q6UWN8 80 aa6.07□□□□□ -1.44
TPM4-216ENST00000592822 SPANXDQ9BXN6 97 aa6.07□□□□□ -1.44
TPM4-216ENST00000592822 SPANXCQ9NY87 97 aa6.07□□□□□ -1.44
TPM4-216ENST00000592822 TMEM238C9JI98 176 aa6.06□□□□□ -1.44
TPM4-216ENST00000592822 BCE1O60756 84 aa6.06□□□□□ -1.44
TPM4-216ENST00000592822 NDUFC2O95298 119 aa6.06□□□□□ -1.44
TPM4-216ENST00000592822 PAM16Q9Y3D7 125 aa6.06□□□□□ -1.44
TPM4-216ENST00000592822 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
TPM4-216ENST00000592822 TRBV10-2A0A0K0K1G8 114 aa6.05□□□□□ -1.44
TPM4-216ENST00000592822 COX8AP10176 69 aa6.05□□□□□ -1.44
TPM4-216ENST00000592822 SPATA45Q537H7 98 aa6.05□□□□□ -1.44
TPM4-216ENST00000592822 VAMP8Q9BV40 100 aa6.05□□□□□ -1.44
TPM4-216ENST00000592822 TMEM126AQ9H061 195 aa6.05□□□□□ -1.44
TPM4-216ENST00000592822 SPANXB1Q9NS25 103 aaPredicted RBP6.05□□□□□ -1.44
TPM4-216ENST00000592822 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
TPM4-216ENST00000592822 TRBV10-3A0A0K0K1G6 114 aa6.04□□□□□ -1.44
TPM4-216ENST00000592822 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
TPM4-216ENST00000592822 Q6ZVH6 145 aa6.04□□□□□ -1.44
TPM4-216ENST00000592822 ZNF861PO60384 105 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 IFITM1P13164 125 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 DDTP30046 118 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 MUSTN1Q8IVN3 82 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 DIRC1Q969H9 104 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 C14orf144Q96I85 54 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 PPDPFQ9H3Y8 114 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
TPM4-216ENST00000592822 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
TPM4-216ENST00000592822 H0Y9J4 135 aa6.02□□□□□ -1.45
TPM4-216ENST00000592822 PRYO14603 147 aa6.02□□□□□ -1.45
TPM4-216ENST00000592822 DLEU1O43261 78 aa6.02□□□□□ -1.45
TPM4-216ENST00000592822 IGLV6-57P01721 117 aa6.02□□□□□ -1.45
TPM4-216ENST00000592822 OXTP01178 125 aa6.01□□□□□ -1.45
TPM4-216ENST00000592822 SPRR1AP35321 89 aa6.01□□□□□ -1.45
TPM4-216ENST00000592822 RPL28P46779 137 aaKnown RBP6.01□□□□□ -1.45
TPM4-216ENST00000592822 S100A7L2Q5SY68 101 aa6.01□□□□□ -1.45
TPM4-216ENST00000592822 FAM19A1Q7Z5A9 133 aa6.01□□□□□ -1.45
TPM4-216ENST00000592822 COPS9Q8WXC6 57 aa6.01□□□□□ -1.45
TPM4-216ENST00000592822 KRTAP4-16G5E9R7 235 aaPredicted RBP6□□□□□ -1.45
TPM4-216ENST00000592822 UBE2AP49459 152 aa6□□□□□ -1.45
TPM4-216ENST00000592822 PRLHP81277 87 aa6□□□□□ -1.45
TPM4-216ENST00000592822 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms