RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	C1orf137	Q5JT78	98 aa		14.32	□□□□□ -0.12
CIRBP-231	ENST00000591097	MRPL55	Q7Z7F7	128 aa	Known RBP	14.32	□□□□□ -0.12
CIRBP-231	ENST00000591097	MYMX	A0A1B0GTQ4	84 aa		14.31	□□□□□ -0.12
CIRBP-231	ENST00000591097	OXT	P01178	125 aa		14.31	□□□□□ -0.12
CIRBP-231	ENST00000591097	KRTDAP	P60985	99 aa		14.31	□□□□□ -0.12
CIRBP-231	ENST00000591097	LBH	Q53QV2	105 aa	Predicted RBP	14.31	□□□□□ -0.12
CIRBP-231	ENST00000591097	SMIM13	P0DJ93	91 aa		14.3	□□□□□ -0.12
CIRBP-231	ENST00000591097	LINC00158	P58513	81 aa		14.3	□□□□□ -0.12
CIRBP-231	ENST00000591097	SPINK6	Q6UWN8	80 aa		14.3	□□□□□ -0.12
CIRBP-231	ENST00000591097		E9PLD3	99 aa		14.29	□□□□□ -0.12
CIRBP-231	ENST00000591097		Q8NDZ9	215 aa		14.29	□□□□□ -0.12
CIRBP-231	ENST00000591097		A0A0U1RRA0	63 aa		14.28	□□□□□ -0.12
CIRBP-231	ENST00000591097	VPREB1	P12018	145 aa		14.28	□□□□□ -0.12
CIRBP-231	ENST00000591097	IGLV7-43	P04211	117 aa		14.27	□□□□□ -0.12
CIRBP-231	ENST00000591097	NMU	P48645	174 aa		14.27	□□□□□ -0.12
CIRBP-231	ENST00000591097	MEIG1	Q5JSS6	88 aa		14.27	□□□□□ -0.12
CIRBP-231	ENST00000591097	HIST3H2BB	Q8N257	126 aa		14.27	□□□□□ -0.12
CIRBP-231	ENST00000591097	LINC00167	Q96N53	147 aa		14.26	□□□□□ -0.13
CIRBP-231	ENST00000591097	LGALS3	P17931	250 aa	Known RBP	14.25	□□□□□ -0.13
CIRBP-231	ENST00000591097	TNXB	P22105	4242 aa		14.25	□□□□□ -0.13
CIRBP-231	ENST00000591097	LINC00587	B1AMM8	73 aa		14.25	□□□□□ -0.13
CIRBP-231	ENST00000591097	MIR7-3HG	Q8N6C7	128 aa		14.25	□□□□□ -0.13
CIRBP-231	ENST00000591097	NKAPP1	Q8N9T2	125 aa		14.25	□□□□□ -0.13
CIRBP-231	ENST00000591097		J3QL48	77 aa		14.24	□□□□□ -0.13
CIRBP-231	ENST00000591097	HIST1H2BL	Q99880	126 aa		14.24	□□□□□ -0.13
CIRBP-231	ENST00000591097	GAGE10	A6NGK3	116 aa		14.23	□□□□□ -0.13
CIRBP-231	ENST00000591097	RPL37AP8	A6NKH3	93 aa		14.22	□□□□□ -0.13
CIRBP-231	ENST00000591097	RPL24	P83731	157 aa	Known RBP	14.22	□□□□□ -0.13
CIRBP-231	ENST00000591097	IGKV2D-26	A0A0A0MRZ7	120 aa		14.2	□□□□□ -0.14
CIRBP-231	ENST00000591097	C20orf202	A1L168	122 aa		14.2	□□□□□ -0.14
CIRBP-231	ENST00000591097	S100A6	P06703	90 aa		14.2	□□□□□ -0.14
CIRBP-231	ENST00000591097	MT1HL1	P0DM35	61 aa		14.19	□□□□□ -0.14
CIRBP-231	ENST00000591097	S100A2	P29034	98 aa		14.18	□□□□□ -0.14
CIRBP-231	ENST00000591097	DAND5	Q8N907	189 aa		14.18	□□□□□ -0.14
CIRBP-231	ENST00000591097	LOC107984156	A0A0G2JMH3	177 aa		14.16	□□□□□ -0.14
CIRBP-231	ENST00000591097		A0A0J9YXY3	114 aa		14.16	□□□□□ -0.14
CIRBP-231	ENST00000591097	ARL17A	Q8IVW1	177 aa		14.16	□□□□□ -0.14
CIRBP-231	ENST00000591097	BOD1L2	Q8IYS8	172 aa		14.16	□□□□□ -0.14
CIRBP-231	ENST00000591097	IGLV1-50	A0A075B6I6	118 aa		14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097	IGKV2-28	A0A075B6P5	120 aa		14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097	IGKV2D-28	P01615	120 aa		14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097	REG3G	Q6UW15	175 aa		14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097	LINC01600	Q96MT4	127 aa		14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097	BCE1	O60756	84 aa		14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097	SNRPE	P62304	92 aa	Known RBP	14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097	ATOH7	Q8N100	152 aa		14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097	DIRC1	Q969H9	104 aa		14.15	□□□□□ -0.14
CIRBP-231	ENST00000591097		H0Y9J4	135 aa		14.14	□□□□□ -0.15
CIRBP-231	ENST00000591097	C5orf52	A6NGY3	159 aa		14.13	□□□□□ -0.15
CIRBP-231	ENST00000591097	ZNF861P	O60384	105 aa		14.13	□□□□□ -0.15
CIRBP-231	ENST00000591097	ADAMTSL4-AS1	Q5T5F5	129 aa		14.13	□□□□□ -0.15
CIRBP-231	ENST00000591097	TTTY13	Q9BZ97	58 aa		14.13	□□□□□ -0.15
CIRBP-231	ENST00000591097	AKR1D1	P51857	326 aa		14.12	□□□□□ -0.15
CIRBP-231	ENST00000591097	ANKRD39	Q53RE8	183 aa		14.12	□□□□□ -0.15
CIRBP-231	ENST00000591097	LITAF	Q99732	161 aa		14.11	□□□□□ -0.15
CIRBP-231	ENST00000591097	ZNF815P	A8K554	130 aa		14.1	□□□□□ -0.15
CIRBP-231	ENST00000591097		M0R378	163 aa		14.1	□□□□□ -0.15
CIRBP-231	ENST00000591097	KRTAP13-1	Q8IUC0	172 aa		14.1	□□□□□ -0.15
CIRBP-231	ENST00000591097	TMEM238	C9JI98	176 aa		14.08	□□□□□ -0.16
CIRBP-231	ENST00000591097	EIF4EBP3	O60516	100 aa	Predicted RBP	14.08	□□□□□ -0.16
CIRBP-231	ENST00000591097	SOSTDC1	Q6X4U4	206 aa		14.08	□□□□□ -0.16
CIRBP-231	ENST00000591097	TMEM126A	Q9H061	195 aa		14.08	□□□□□ -0.16
CIRBP-231	ENST00000591097	NCR3	O14931	201 aa		14.07	□□□□□ -0.16
CIRBP-231	ENST00000591097	TIMM17B	O60830	172 aa		14.07	□□□□□ -0.16
CIRBP-231	ENST00000591097	RPL28	P46779	137 aa	Known RBP	14.06	□□□□□ -0.16
CIRBP-231	ENST00000591097	KRTAP1-4	P0C5Y4	121 aa		14.05	□□□□□ -0.16
CIRBP-231	ENST00000591097	MIEN1	Q9BRT3	115 aa		14.05	□□□□□ -0.16
CIRBP-231	ENST00000591097	KRTAP10-8	P60410	259 aa		14.04	□□□□□ -0.16
CIRBP-231	ENST00000591097	NDUFC2	O95298	119 aa		14.03	□□□□□ -0.16
CIRBP-231	ENST00000591097	TRBV10-2	A0A0K0K1G8	114 aa		14.02	□□□□□ -0.16
CIRBP-231	ENST00000591097	NPC2	P61916	151 aa		14.02	□□□□□ -0.16
CIRBP-231	ENST00000591097	PCP2	Q8IVA1	136 aa		14.01	□□□□□ -0.17
CIRBP-231	ENST00000591097	SPANXB1	Q9NS25	103 aa	Predicted RBP	14.01	□□□□□ -0.17
CIRBP-231	ENST00000591097	TRBV10-3	A0A0K0K1G6	114 aa		14	□□□□□ -0.17
CIRBP-231	ENST00000591097	UBE2A	P49459	152 aa		14	□□□□□ -0.17
CIRBP-231	ENST00000591097	KCNQ1DN	Q9H478	68 aa		14	□□□□□ -0.17
CIRBP-231	ENST00000591097	PRLH	P81277	87 aa		14	□□□□□ -0.17
CIRBP-231	ENST00000591097	LINC00308	Q8TCZ7	52 aa		14	□□□□□ -0.17
CIRBP-231	ENST00000591097	PRY	O14603	147 aa		13.98	□□□□□ -0.17
CIRBP-231	ENST00000591097	SPRR1A	P35321	89 aa		13.98	□□□□□ -0.17
CIRBP-231	ENST00000591097	FAM19A1	Q7Z5A9	133 aa		13.97	□□□□□ -0.17
CIRBP-231	ENST00000591097	SCGB1D4	Q6XE38	83 aa		13.96	□□□□□ -0.17
CIRBP-231	ENST00000591097	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	13.95	□□□□□ -0.18
CIRBP-231	ENST00000591097	IGLV6-57	P01721	117 aa		13.95	□□□□□ -0.18
CIRBP-231	ENST00000591097	PRR26	Q8N8Z3	221 aa		13.95	□□□□□ -0.18
CIRBP-231	ENST00000591097	SPANXD	Q9BXN6	97 aa		13.95	□□□□□ -0.18
CIRBP-231	ENST00000591097	SPANXC	Q9NY87	97 aa		13.95	□□□□□ -0.18
CIRBP-231	ENST00000591097	HMCN2	Q8NDA2	5059 aa		13.94	□□□□□ -0.18
CIRBP-231	ENST00000591097	SCGB1D1	O95968	90 aa		13.94	□□□□□ -0.18
CIRBP-231	ENST00000591097	DDT	P30046	118 aa		13.94	□□□□□ -0.18
CIRBP-231	ENST00000591097	HSBP1L1	C9JCN9	74 aa		13.93	□□□□□ -0.18
CIRBP-231	ENST00000591097	LINC00337	Q8N6G1	96 aa		13.93	□□□□□ -0.18
CIRBP-231	ENST00000591097	S100A7L2	Q5SY68	101 aa		13.89	□□□□□ -0.19
CIRBP-231	ENST00000591097	PPDPF	Q9H3Y8	114 aa		13.89	□□□□□ -0.19
CIRBP-231	ENST00000591097		Q6ZVH6	145 aa		13.88	□□□□□ -0.19
CIRBP-231	ENST00000591097	S100A12	P80511	92 aa		13.87	□□□□□ -0.19
CIRBP-231	ENST00000591097	IFITM1	P13164	125 aa		13.85	□□□□□ -0.19
CIRBP-231	ENST00000591097	HIGD2A	Q9BW72	106 aa		13.85	□□□□□ -0.19
CIRBP-231	ENST00000591097		A0A087X002	238 aa		13.85	□□□□□ -0.19
CIRBP-231	ENST00000591097	ETDC	A0A1B0GVM5	59 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms