RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 MIEN1Q9BRT3 115 aa8.1□□□□□ -1.11
DDX39A-213ENST00000590315 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.11
DDX39A-213ENST00000590315 JOSD1Q15040 202 aaPredicted RBP8.09□□□□□ -1.11
DDX39A-213ENST00000590315 PCP2Q8IVA1 136 aa8.09□□□□□ -1.11
DDX39A-213ENST00000590315 Q8N1X5 172 aa8.09□□□□□ -1.11
DDX39A-213ENST00000590315 VAMP8Q9BV40 100 aa8.09□□□□□ -1.11
DDX39A-213ENST00000590315 PAM16Q9Y3D7 125 aa8.09□□□□□ -1.11
DDX39A-213ENST00000590315 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
DDX39A-213ENST00000590315 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
DDX39A-213ENST00000590315 SPATA45Q537H7 98 aa8.07□□□□□ -1.12
DDX39A-213ENST00000590315 BOD1L2Q8IYS8 172 aa8.07□□□□□ -1.12
DDX39A-213ENST00000590315 HSPG2P98160 4391 aa8.07□□□□□ -1.12
DDX39A-213ENST00000590315 GAGE10A6NGK3 116 aa8.06□□□□□ -1.12
DDX39A-213ENST00000590315 C22orf24Q9Y442 160 aa8.06□□□□□ -1.12
DDX39A-213ENST00000590315 TMEM238C9JI98 176 aa8.05□□□□□ -1.12
DDX39A-213ENST00000590315 NCR3O14931 201 aa8.05□□□□□ -1.12
DDX39A-213ENST00000590315 LBHQ53QV2 105 aaPredicted RBP8.05□□□□□ -1.12
DDX39A-213ENST00000590315 MRPL55Q7Z7F7 128 aaKnown RBP8.05□□□□□ -1.12
DDX39A-213ENST00000590315 TIMM17BO60830 172 aa8.04□□□□□ -1.12
DDX39A-213ENST00000590315 PYY3Q5JQD4 70 aa8.04□□□□□ -1.12
DDX39A-213ENST00000590315 ADAMTSL4-AS1Q5T5F5 129 aa8.04□□□□□ -1.12
DDX39A-213ENST00000590315 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
DDX39A-213ENST00000590315 PLA2G2DQ9UNK4 145 aa8.04□□□□□ -1.12
DDX39A-213ENST00000590315 RPL37AP8A6NKH3 93 aa8.03□□□□□ -1.12
DDX39A-213ENST00000590315 VPREB1P12018 145 aa8.03□□□□□ -1.12
DDX39A-213ENST00000590315 TP73-AS1Q9UF72 201 aa8.02□□□□□ -1.13
DDX39A-213ENST00000590315 IGLV5-37A0A075B6J1 123 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 COX8AP10176 69 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 PRR3P79522 188 aaKnown RBP8.01□□□□□ -1.13
DDX39A-213ENST00000590315 C1orf137Q5JT78 98 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 Q8NDZ9 215 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 C14orf144Q96I85 54 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 LITAFQ99732 161 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
DDX39A-213ENST00000590315 S100A12P80511 92 aa8□□□□□ -1.13
DDX39A-213ENST00000590315 SRSF9Q13242 221 aaKnown RBP eCLIP8□□□□□ -1.13
DDX39A-213ENST00000590315 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
DDX39A-213ENST00000590315 COPS9Q8WXC6 57 aa8□□□□□ -1.13
DDX39A-213ENST00000590315 SPANXDQ9BXN6 97 aa8□□□□□ -1.13
DDX39A-213ENST00000590315 SPANXCQ9NY87 97 aa8□□□□□ -1.13
DDX39A-213ENST00000590315 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
DDX39A-213ENST00000590315 M0R378 163 aa7.99□□□□□ -1.13
DDX39A-213ENST00000590315 SOSTDC1Q6X4U4 206 aa7.99□□□□□ -1.13
DDX39A-213ENST00000590315 SLC25A34Q6PIV7 304 aa7.98□□□□□ -1.13
DDX39A-213ENST00000590315 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
DDX39A-213ENST00000590315 HERC2O95714 4834 aa7.98□□□□□ -1.13
DDX39A-213ENST00000590315 S100A7L2Q5SY68 101 aa7.97□□□□□ -1.13
DDX39A-213ENST00000590315 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
DDX39A-213ENST00000590315 SPANXB1Q9NS25 103 aaPredicted RBP7.97□□□□□ -1.13
DDX39A-213ENST00000590315 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
DDX39A-213ENST00000590315 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
DDX39A-213ENST00000590315 Q6ZVH6 145 aa7.96□□□□□ -1.14
DDX39A-213ENST00000590315 HIST1H4GQ99525 98 aa7.96□□□□□ -1.14
DDX39A-213ENST00000590315 LOC107984156A0A0G2JMH3 177 aa7.95□□□□□ -1.14
DDX39A-213ENST00000590315 NDUFC2O95298 119 aa7.95□□□□□ -1.14
DDX39A-213ENST00000590315 IFITM1P13164 125 aa7.95□□□□□ -1.14
DDX39A-213ENST00000590315 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
DDX39A-213ENST00000590315 ARL17AQ8IVW1 177 aa7.95□□□□□ -1.14
DDX39A-213ENST00000590315 OR13C6PQ8NH95 151 aa7.95□□□□□ -1.14
DDX39A-213ENST00000590315 VPS13BQ7Z7G8 4022 aa7.94□□□□□ -1.14
DDX39A-213ENST00000590315 DLEU1O43261 78 aa7.94□□□□□ -1.14
DDX39A-213ENST00000590315 DDTP30046 118 aa7.94□□□□□ -1.14
DDX39A-213ENST00000590315 IGLV1-50A0A075B6I6 118 aa7.93□□□□□ -1.14
DDX39A-213ENST00000590315 TRBV10-3A0A0K0K1G6 114 aa7.93□□□□□ -1.14
DDX39A-213ENST00000590315 TRBV10-2A0A0K0K1G8 114 aa7.93□□□□□ -1.14
DDX39A-213ENST00000590315 SMIM6P0DI80 62 aa7.93□□□□□ -1.14
DDX39A-213ENST00000590315 UBE2AP49459 152 aa7.93□□□□□ -1.14
DDX39A-213ENST00000590315 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
DDX39A-213ENST00000590315 LOC105371267A0A1B0GV96 52 aa7.92□□□□□ -1.14
DDX39A-213ENST00000590315 PRYO14603 147 aa7.92□□□□□ -1.14
DDX39A-213ENST00000590315 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
DDX39A-213ENST00000590315 HNRNPA3P51991 378 aaKnown RBP7.92□□□□□ -1.14
DDX39A-213ENST00000590315 KRTAP10-4P60372 401 aaPredicted RBP7.92□□□□□ -1.14
DDX39A-213ENST00000590315 FAM19A1Q7Z5A9 133 aa7.92□□□□□ -1.14
DDX39A-213ENST00000590315 BCE1O60756 84 aa7.91□□□□□ -1.14
DDX39A-213ENST00000590315 TMEM126AQ9H061 195 aa7.91□□□□□ -1.14
DDX39A-213ENST00000590315 FAT1Q14517 4588 aa7.9□□□□□ -1.14
DDX39A-213ENST00000590315 LINC00518Q8N0U6 118 aa7.9□□□□□ -1.14
DDX39A-213ENST00000590315 ETDCA0A1B0GVM5 59 aa7.89□□□□□ -1.15
DDX39A-213ENST00000590315 A6NDN8 102 aa7.89□□□□□ -1.15
DDX39A-213ENST00000590315 C2orf91Q6ZV80 131 aa7.89□□□□□ -1.15
DDX39A-213ENST00000590315 C12orf57Q99622 126 aa7.89□□□□□ -1.15
DDX39A-213ENST00000590315 PRO1933Q9H354 126 aa7.89□□□□□ -1.15
DDX39A-213ENST00000590315 HIGD1BQ9P298 99 aa7.89□□□□□ -1.15
DDX39A-213ENST00000590315 UQCR10Q9UDW1 63 aa7.89□□□□□ -1.15
DDX39A-213ENST00000590315 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
DDX39A-213ENST00000590315 TRAV23DV6A0A075B6W5 121 aa7.88□□□□□ -1.15
DDX39A-213ENST00000590315 A4D1N5 150 aa7.88□□□□□ -1.15
DDX39A-213ENST00000590315 RPL28P46779 137 aaKnown RBP7.88□□□□□ -1.15
DDX39A-213ENST00000590315 PRLHP81277 87 aa7.88□□□□□ -1.15
DDX39A-213ENST00000590315 CBY1Q9Y3M2 126 aa7.88□□□□□ -1.15
DDX39A-213ENST00000590315 SPINK6Q6UWN8 80 aa7.87□□□□□ -1.15
DDX39A-213ENST00000590315 LINC00337Q8N6G1 96 aa7.87□□□□□ -1.15
DDX39A-213ENST00000590315 DIRC1Q969H9 104 aa7.87□□□□□ -1.15
DDX39A-213ENST00000590315 PPDPFQ9H3Y8 114 aa7.87□□□□□ -1.15
DDX39A-213ENST00000590315 IGLV6-57P01721 117 aa7.86□□□□□ -1.15
DDX39A-213ENST00000590315 KCNQ1DNQ9H478 68 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms