RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
NPC1-208ENST00000590301 RPL28P46779 137 aaKnown RBP4.57□□□□□ -1.68
NPC1-208ENST00000590301 SEC61BP60468 96 aaKnown RBP4.57□□□□□ -1.68
NPC1-208ENST00000590301 FABP9Q0Z7S8 132 aa4.57□□□□□ -1.68
NPC1-208ENST00000590301 IGLV5-37A0A075B6J1 123 aa4.56□□□□□ -1.68
NPC1-208ENST00000590301 A0A096LNJ9 63 aa4.56□□□□□ -1.68
NPC1-208ENST00000590301 BCE1O60756 84 aa4.56□□□□□ -1.68
NPC1-208ENST00000590301 SFTA2Q6UW10 78 aa4.56□□□□□ -1.68
NPC1-208ENST00000590301 IGLV5-39A0A0G2JS06 123 aa4.55□□□□□ -1.68
NPC1-208ENST00000590301 SPINK8P0C7L1 97 aa4.55□□□□□ -1.68
NPC1-208ENST00000590301 IGLC3P0DOY3 106 aa4.55□□□□□ -1.68
NPC1-208ENST00000590301 A0A0U1RRA0 63 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 PCP4L1A6NKN8 68 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 SNAPINO95295 136 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 RAB5BP61020 215 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 COX17Q14061 63 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 SVBPQ8N300 66 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 C18orf32Q8TCD1 76 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 LINC00167Q96N53 147 aa4.54□□□□□ -1.68
NPC1-208ENST00000590301 HBDP02042 147 aa4.53□□□□□ -1.68
NPC1-208ENST00000590301 LINC00614P0C842 121 aa4.53□□□□□ -1.68
NPC1-208ENST00000590301 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
NPC1-208ENST00000590301 SLC7A5P1Q8MH63 180 aa4.53□□□□□ -1.68
NPC1-208ENST00000590301 TRAPPC1Q9Y5R8 145 aa4.53□□□□□ -1.68
NPC1-208ENST00000590301 CRYGAP11844 174 aa4.52□□□□□ -1.69
NPC1-208ENST00000590301 ZNF22P17026 224 aaPredicted RBP4.52□□□□□ -1.69
NPC1-208ENST00000590301 NDUFA6P56556 154 aa4.52□□□□□ -1.69
NPC1-208ENST00000590301 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
NPC1-208ENST00000590301 NDUFA5Q16718 116 aa4.52□□□□□ -1.69
NPC1-208ENST00000590301 RPL37AP8A6NKH3 93 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 PFN2P35080 140 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 UBE2AP49459 152 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 HERV-K104P63124 156 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 FAM229BQ4G0N7 80 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 Q75L30 129 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 KRTAP13-1Q8IUC0 172 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 CBLN2Q8IUK8 224 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 ERG28Q9UKR5 140 aa4.51□□□□□ -1.69
NPC1-208ENST00000590301 CTAG1AP78358 180 aa4.5□□□□□ -1.69
NPC1-208ENST00000590301 PRR4Q16378 134 aa4.5□□□□□ -1.69
NPC1-208ENST00000590301 BAGE3Q86Y29 109 aa4.5□□□□□ -1.69
NPC1-208ENST00000590301 TYMSOSQ8TAI1 123 aa4.5□□□□□ -1.69
NPC1-208ENST00000590301 SND1-IT1Q9HBX3 110 aa4.5□□□□□ -1.69
NPC1-208ENST00000590301 TRAV12-1A0A0B4J245 112 aa4.49□□□□□ -1.69
NPC1-208ENST00000590301 C11orf86A6NJI1 115 aa4.49□□□□□ -1.69
NPC1-208ENST00000590301 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
NPC1-208ENST00000590301 TMEM170BQ5T4T1 132 aa4.49□□□□□ -1.69
NPC1-208ENST00000590301 CHCHD1Q96BP2 118 aaKnown RBP4.49□□□□□ -1.69
NPC1-208ENST00000590301 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
NPC1-208ENST00000590301 A0A087X002 238 aa4.48□□□□□ -1.69
NPC1-208ENST00000590301 COLCA2A8K830 154 aa4.48□□□□□ -1.69
NPC1-208ENST00000590301 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
NPC1-208ENST00000590301 ZNF625Q96I27 306 aaPredicted RBP4.48□□□□□ -1.69
NPC1-208ENST00000590301 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
NPC1-208ENST00000590301 TMEM126AQ9H061 195 aa4.48□□□□□ -1.69
NPC1-208ENST00000590301 CHTOPQ9Y3Y2 248 aaKnown RBP4.48□□□□□ -1.69
NPC1-208ENST00000590301 LINC00587B1AMM8 73 aa4.47□□□□□ -1.69
NPC1-208ENST00000590301 IGKV2D-26A0A0A0MRZ7 120 aa4.46□□□□□ -1.7
NPC1-208ENST00000590301 TMEM223A0PJW6 202 aa4.46□□□□□ -1.7
NPC1-208ENST00000590301 M0R378 163 aa4.46□□□□□ -1.7
NPC1-208ENST00000590301 TSPAN13O95857 204 aa4.46□□□□□ -1.7
NPC1-208ENST00000590301 TRGC2P03986 189 aa4.46□□□□□ -1.7
NPC1-208ENST00000590301 LINC00158P58513 81 aa4.46□□□□□ -1.7
NPC1-208ENST00000590301 FAM19A1Q7Z5A9 133 aa4.46□□□□□ -1.7
NPC1-208ENST00000590301 IFI27L1Q96BM0 104 aa4.46□□□□□ -1.7
NPC1-208ENST00000590301 TMEM238C9JI98 176 aa4.45□□□□□ -1.7
NPC1-208ENST00000590301 SCO1O75880 301 aa4.45□□□□□ -1.7
NPC1-208ENST00000590301 PRLHP81277 87 aa4.45□□□□□ -1.7
NPC1-208ENST00000590301 KRTAP13-2Q52LG2 175 aa4.45□□□□□ -1.7
NPC1-208ENST00000590301 LINC00304Q8N9R0 145 aa4.45□□□□□ -1.7
NPC1-208ENST00000590301 HSBP1O75506 76 aa4.44□□□□□ -1.7
NPC1-208ENST00000590301 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
NPC1-208ENST00000590301 PLEKHB2Q96CS7 222 aa4.44□□□□□ -1.7
NPC1-208ENST00000590301 MAP1LC3CQ9BXW4 147 aa4.44□□□□□ -1.7
NPC1-208ENST00000590301 ANAPC11Q9NYG5 84 aa4.44□□□□□ -1.7
NPC1-208ENST00000590301 ZNF706Q9Y5V0 76 aaPredicted RBP4.44□□□□□ -1.7
NPC1-208ENST00000590301 A0A0U1RQV1 116 aa4.43□□□□□ -1.7
NPC1-208ENST00000590301 S100A12P80511 92 aa4.43□□□□□ -1.7
NPC1-208ENST00000590301 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
NPC1-208ENST00000590301 MEIG1Q5JSS6 88 aa4.43□□□□□ -1.7
NPC1-208ENST00000590301 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
NPC1-208ENST00000590301 FAM19A2Q8N3H0 131 aa4.43□□□□□ -1.7
NPC1-208ENST00000590301 Q8NDZ9 215 aa4.43□□□□□ -1.7
NPC1-208ENST00000590301 MYMXA0A1B0GTQ4 84 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 SERF1AO75920 110 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 SMIM13P0DJ93 91 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 PLNP26678 52 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 BOD1L2Q8IYS8 172 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 LINC00337Q8N6G1 96 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 HIGD2AQ9BW72 106 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 NDUFA12Q9UI09 145 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 LPAP08519 4548 aa4.42□□□□□ -1.7
NPC1-208ENST00000590301 LEPROTL1O95214 131 aa4.41□□□□□ -1.7
NPC1-208ENST00000590301 MIR7-3HGQ8N6C7 128 aa4.41□□□□□ -1.7
NPC1-208ENST00000590301 SPRR4Q96PI1 79 aa4.41□□□□□ -1.7
NPC1-208ENST00000590301 KCNQ1DNQ9H478 68 aa4.41□□□□□ -1.7
NPC1-208ENST00000590301 HSPB8Q9UJY1 196 aa4.41□□□□□ -1.7
NPC1-208ENST00000590301 MUC2Q02817 5179 aa4.41□□□□□ -1.7
NPC1-208ENST00000590301 LOC107984156A0A0G2JMH3 177 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms