RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
NEDD4L-227ENST00000590020 A0A1B0GXF2 115 aa6.89□□□□□ -1.31
NEDD4L-227ENST00000590020 RPL23P62829 140 aaKnown RBP6.89□□□□□ -1.31
NEDD4L-227ENST00000590020 ADIRFQ15847 76 aa6.89□□□□□ -1.31
NEDD4L-227ENST00000590020 RGS21Q2M5E4 152 aa6.89□□□□□ -1.31
NEDD4L-227ENST00000590020 KRTAP4-16G5E9R7 235 aaPredicted RBP6.88□□□□□ -1.31
NEDD4L-227ENST00000590020 SRP19P09132 144 aaKnown RBP6.88□□□□□ -1.31
NEDD4L-227ENST00000590020 SLC51BQ86UW2 128 aa6.88□□□□□ -1.31
NEDD4L-227ENST00000590020 SMCR5Q8TEV8 140 aa6.88□□□□□ -1.31
NEDD4L-227ENST00000590020 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
NEDD4L-227ENST00000590020 GAGE2AQ6NT46 116 aa6.87□□□□□ -1.31
NEDD4L-227ENST00000590020 Q8N8P6 123 aa6.87□□□□□ -1.31
NEDD4L-227ENST00000590020 MAP1LC3AQ9H492 121 aa6.87□□□□□ -1.31
NEDD4L-227ENST00000590020 PRSS47A8MTI9 375 aa6.86□□□□□ -1.31
NEDD4L-227ENST00000590020 ATP5LO75964 103 aa6.86□□□□□ -1.31
NEDD4L-227ENST00000590020 S100A8P05109 93 aa6.86□□□□□ -1.31
NEDD4L-227ENST00000590020 RPL24P83731 157 aaKnown RBP6.86□□□□□ -1.31
NEDD4L-227ENST00000590020 ALKAL2Q6UX46 152 aa6.86□□□□□ -1.31
NEDD4L-227ENST00000590020 AKAP14Q86UN6 197 aa6.86□□□□□ -1.31
NEDD4L-227ENST00000590020 NPSP0C0P6 89 aa6.85□□□□□ -1.31
NEDD4L-227ENST00000590020 BLOC1S1P78537 153 aa6.85□□□□□ -1.31
NEDD4L-227ENST00000590020 ORMDL2Q53FV1 153 aa6.85□□□□□ -1.31
NEDD4L-227ENST00000590020 LINC00483Q53H64 154 aa6.84□□□□□ -1.31
NEDD4L-227ENST00000590020 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
NEDD4L-227ENST00000590020 SYNE2Q8WXH0 6885 aaKnown RBP6.84□□□□□ -1.32
NEDD4L-227ENST00000590020 IGLV5-45A0A087WSX0 123 aa6.83□□□□□ -1.32
NEDD4L-227ENST00000590020 TINCRA0A1B0GVN0 87 aa6.83□□□□□ -1.32
NEDD4L-227ENST00000590020 PAPPA-AS1Q5QFB9 102 aa6.83□□□□□ -1.32
NEDD4L-227ENST00000590020 TIMM17AQ99595 171 aa6.83□□□□□ -1.32
NEDD4L-227ENST00000590020 ERG28Q9UKR5 140 aa6.83□□□□□ -1.32
NEDD4L-227ENST00000590020 ADCYAP1P18509 176 aa6.82□□□□□ -1.32
NEDD4L-227ENST00000590020 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
NEDD4L-227ENST00000590020 ERC2-IT1O76042 136 aa6.8□□□□□ -1.32
NEDD4L-227ENST00000590020 TOMM6Q96B49 74 aa6.8□□□□□ -1.32
NEDD4L-227ENST00000590020 NAT8Q9UHE5 227 aa6.8□□□□□ -1.32
NEDD4L-227ENST00000590020 LAMTOR2Q9Y2Q5 125 aa6.8□□□□□ -1.32
NEDD4L-227ENST00000590020 SCGB3A1Q96QR1 104 aa6.79□□□□□ -1.32
NEDD4L-227ENST00000590020 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
NEDD4L-227ENST00000590020 C9JQL5 133 aa6.78□□□□□ -1.32
NEDD4L-227ENST00000590020 C9orf153Q5TBE3 101 aa6.78□□□□□ -1.32
NEDD4L-227ENST00000590020 KRTAP4-11Q9BYQ6 195 aa6.78□□□□□ -1.32
NEDD4L-227ENST00000590020 ETDCA0A1B0GVM5 59 aa6.77□□□□□ -1.33
NEDD4L-227ENST00000590020 PRYO14603 147 aa6.77□□□□□ -1.33
NEDD4L-227ENST00000590020 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
NEDD4L-227ENST00000590020 ERASQ7Z444 233 aa6.77□□□□□ -1.33
NEDD4L-227ENST00000590020 CST9LQ9H4G1 147 aa6.77□□□□□ -1.33
NEDD4L-227ENST00000590020 A0A0U1RRA0 63 aa6.76□□□□□ -1.33
NEDD4L-227ENST00000590020 NCR3O14931 201 aa6.76□□□□□ -1.33
NEDD4L-227ENST00000590020 SPRR1AP35321 89 aa6.76□□□□□ -1.33
NEDD4L-227ENST00000590020 ATP5L2Q7Z4Y8 100 aa6.76□□□□□ -1.33
NEDD4L-227ENST00000590020 H3BRM9 83 aa6.75□□□□□ -1.33
NEDD4L-227ENST00000590020 K7EMI3 77 aa6.75□□□□□ -1.33
NEDD4L-227ENST00000590020 IGLV6-57P01721 117 aa6.75□□□□□ -1.33
NEDD4L-227ENST00000590020 COX17Q14061 63 aa6.75□□□□□ -1.33
NEDD4L-227ENST00000590020 HRCT1Q6UXD1 115 aa6.75□□□□□ -1.33
NEDD4L-227ENST00000590020 NXT2Q9NPJ8 142 aaKnown RBP6.75□□□□□ -1.33
NEDD4L-227ENST00000590020 IGLV5-39A0A0G2JS06 123 aa6.74□□□□□ -1.33
NEDD4L-227ENST00000590020 Q6Q795 121 aa6.74□□□□□ -1.33
NEDD4L-227ENST00000590020 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
NEDD4L-227ENST00000590020 LINC00158P58513 81 aa6.73□□□□□ -1.33
NEDD4L-227ENST00000590020 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
NEDD4L-227ENST00000590020 CFC1P0CG37 223 aa6.72□□□□□ -1.33
NEDD4L-227ENST00000590020 TCTE3Q8IZS6 198 aa6.72□□□□□ -1.33
NEDD4L-227ENST00000590020 TRBV10-3A0A0K0K1G6 114 aa6.71□□□□□ -1.34
NEDD4L-227ENST00000590020 B5MCH6 92 aa6.71□□□□□ -1.34
NEDD4L-227ENST00000590020 G0S2P27469 103 aa6.71□□□□□ -1.34
NEDD4L-227ENST00000590020 PMVKQ15126 192 aa6.71□□□□□ -1.34
NEDD4L-227ENST00000590020 Q9BRP9 147 aa6.71□□□□□ -1.34
NEDD4L-227ENST00000590020 ZNF22P17026 224 aaPredicted RBP6.7□□□□□ -1.34
NEDD4L-227ENST00000590020 RPL37P61927 97 aaKnown RBP6.7□□□□□ -1.34
NEDD4L-227ENST00000590020 BOD1L2Q8IYS8 172 aa6.7□□□□□ -1.34
NEDD4L-227ENST00000590020 KIAA1644Q3SXP7 199 aa6.69□□□□□ -1.34
NEDD4L-227ENST00000590020 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
NEDD4L-227ENST00000590020 NDUFA6P56556 154 aa6.67□□□□□ -1.34
NEDD4L-227ENST00000590020 LIMD2Q9BT23 127 aa6.67□□□□□ -1.34
NEDD4L-227ENST00000590020 TRAV9-1A0A075B6T8 112 aa6.66□□□□□ -1.34
NEDD4L-227ENST00000590020 SMIM13P0DJ93 91 aa6.66□□□□□ -1.34
NEDD4L-227ENST00000590020 ST20-AS1Q8NBB2 130 aa6.66□□□□□ -1.34
NEDD4L-227ENST00000590020 Q6ZRX8 168 aa6.64□□□□□ -1.35
NEDD4L-227ENST00000590020 ATP6V1G1O75348 118 aa6.63□□□□□ -1.35
NEDD4L-227ENST00000590020 PEA15Q15121 130 aa6.63□□□□□ -1.35
NEDD4L-227ENST00000590020 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
NEDD4L-227ENST00000590020 MIR7-3HGQ8N6C7 128 aa6.63□□□□□ -1.35
NEDD4L-227ENST00000590020 CHTOPQ9Y3Y2 248 aaKnown RBP6.63□□□□□ -1.35
NEDD4L-227ENST00000590020 H7C2G1 150 aa6.62□□□□□ -1.35
NEDD4L-227ENST00000590020 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
NEDD4L-227ENST00000590020 C11orf86A6NJI1 115 aa6.61□□□□□ -1.35
NEDD4L-227ENST00000590020 S100A12P80511 92 aa6.61□□□□□ -1.35
NEDD4L-227ENST00000590020 LINC01546A6NGU7 62 aa6.6□□□□□ -1.35
NEDD4L-227ENST00000590020 MT2AP02795 61 aa6.6□□□□□ -1.35
NEDD4L-227ENST00000590020 DDTP30046 118 aa6.6□□□□□ -1.35
NEDD4L-227ENST00000590020 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
NEDD4L-227ENST00000590020 SFTA2Q6UW10 78 aa6.6□□□□□ -1.35
NEDD4L-227ENST00000590020 LINC01549A6NIU2 74 aa6.58□□□□□ -1.36
NEDD4L-227ENST00000590020 C1orf195Q5TG92 126 aa6.57□□□□□ -1.36
NEDD4L-227ENST00000590020 MT1FP04733 61 aa6.56□□□□□ -1.36
NEDD4L-227ENST00000590020 LCE5AQ5TCM9 118 aa6.56□□□□□ -1.36
NEDD4L-227ENST00000590020 FA2HQ7L5A8 372 aa6.56□□□□□ -1.36
NEDD4L-227ENST00000590020 A0A096LNJ9 63 aa6.55□□□□□ -1.36
NEDD4L-227ENST00000590020 ANAPC16Q96DE5 110 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms