RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FAM229AH3BQW9 127 aa11.86□□□□□ -0.51
CLPTM1-209ENST00000588855 M0QXV9 152 aa11.86□□□□□ -0.51
CLPTM1-209ENST00000588855 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-209ENST00000588855 DAND5Q8N907 189 aa11.86□□□□□ -0.51
CLPTM1-209ENST00000588855 KRTAP4-5Q9BYR2 181 aa11.86□□□□□ -0.51
CLPTM1-209ENST00000588855 SRRM2Q9UQ35 2752 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-209ENST00000588855 PCP2Q8IVA1 136 aa11.85□□□□□ -0.51
CLPTM1-209ENST00000588855 C7orf33Q8WU49 177 aa11.85□□□□□ -0.51
CLPTM1-209ENST00000588855 PLA2G2DQ9UNK4 145 aa11.84□□□□□ -0.51
CLPTM1-209ENST00000588855 Q8NDZ9 215 aa11.83□□□□□ -0.52
CLPTM1-209ENST00000588855 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
CLPTM1-209ENST00000588855 C22orf24Q9Y442 160 aa11.82□□□□□ -0.52
CLPTM1-209ENST00000588855 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
CLPTM1-209ENST00000588855 PKHD1L1Q86WI1 4243 aa11.81□□□□□ -0.52
CLPTM1-209ENST00000588855 PLA2G1BP04054 148 aaKnown RBP11.81□□□□□ -0.52
CLPTM1-209ENST00000588855 VPREB1P12018 145 aa11.81□□□□□ -0.52
CLPTM1-209ENST00000588855 KRTAP10-4P60372 401 aaPredicted RBP11.81□□□□□ -0.52
CLPTM1-209ENST00000588855 LITAFQ99732 161 aa11.81□□□□□ -0.52
CLPTM1-209ENST00000588855 IGLV5-37A0A075B6J1 123 aa11.8□□□□□ -0.52
CLPTM1-209ENST00000588855 PYY3Q5JQD4 70 aa11.8□□□□□ -0.52
CLPTM1-209ENST00000588855 KRTAP11-1Q8IUC1 163 aa11.79□□□□□ -0.52
CLPTM1-209ENST00000588855 NKAPP1Q8N9T2 125 aa11.79□□□□□ -0.52
CLPTM1-209ENST00000588855 TP73-AS1Q9UF72 201 aa11.79□□□□□ -0.52
CLPTM1-209ENST00000588855 TIMM17BO60830 172 aa11.78□□□□□ -0.52
CLPTM1-209ENST00000588855 SCGB1D4Q6XE38 83 aa11.78□□□□□ -0.52
CLPTM1-209ENST00000588855 MRPL55Q7Z7F7 128 aaKnown RBP11.78□□□□□ -0.52
CLPTM1-209ENST00000588855 BOD1L2Q8IYS8 172 aa11.78□□□□□ -0.52
CLPTM1-209ENST00000588855 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
CLPTM1-209ENST00000588855 NPC2P61916 151 aa11.77□□□□□ -0.52
CLPTM1-209ENST00000588855 UBE2BP63146 152 aa11.77□□□□□ -0.52
CLPTM1-209ENST00000588855 RPL24P83731 157 aaKnown RBP11.77□□□□□ -0.52
CLPTM1-209ENST00000588855 PAM16Q9Y3D7 125 aa11.77□□□□□ -0.52
CLPTM1-209ENST00000588855 PRR3P79522 188 aaKnown RBP11.76□□□□□ -0.53
CLPTM1-209ENST00000588855 VAMP8Q9BV40 100 aa11.76□□□□□ -0.53
CLPTM1-209ENST00000588855 LOC107984156A0A0G2JMH3 177 aa11.76□□□□□ -0.53
CLPTM1-209ENST00000588855 GAGE10A6NGK3 116 aa11.76□□□□□ -0.53
CLPTM1-209ENST00000588855 LBHQ53QV2 105 aaPredicted RBP11.76□□□□□ -0.53
CLPTM1-209ENST00000588855 SOSTDC1Q6X4U4 206 aa11.76□□□□□ -0.53
CLPTM1-209ENST00000588855 ARL17AQ8IVW1 177 aa11.76□□□□□ -0.53
CLPTM1-209ENST00000588855 PSORS1C2Q9UIG4 136 aa11.76□□□□□ -0.53
CLPTM1-209ENST00000588855 EIF4EBP3O60516 100 aaPredicted RBP11.75□□□□□ -0.53
CLPTM1-209ENST00000588855 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
CLPTM1-209ENST00000588855 LINC00167Q96N53 147 aa11.75□□□□□ -0.53
CLPTM1-209ENST00000588855 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
CLPTM1-209ENST00000588855 TMEM238C9JI98 176 aa11.73□□□□□ -0.53
CLPTM1-209ENST00000588855 RPL37AP8A6NKH3 93 aa11.72□□□□□ -0.53
CLPTM1-209ENST00000588855 NCR3O14931 201 aa11.72□□□□□ -0.53
CLPTM1-209ENST00000588855 COX8AP10176 69 aa11.71□□□□□ -0.53
CLPTM1-209ENST00000588855 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.53
CLPTM1-209ENST00000588855 SPANXDQ9BXN6 97 aa11.71□□□□□ -0.53
CLPTM1-209ENST00000588855 SPANXCQ9NY87 97 aa11.71□□□□□ -0.53
CLPTM1-209ENST00000588855 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
CLPTM1-209ENST00000588855 C1orf137Q5JT78 98 aa11.7□□□□□ -0.54
CLPTM1-209ENST00000588855 IGKV2-28A0A075B6P5 120 aa11.69□□□□□ -0.54
CLPTM1-209ENST00000588855 M0R378 163 aa11.69□□□□□ -0.54
CLPTM1-209ENST00000588855 IGKV2D-28P01615 120 aa11.69□□□□□ -0.54
CLPTM1-209ENST00000588855 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
CLPTM1-209ENST00000588855 NDUFC2O95298 119 aa11.67□□□□□ -0.54
CLPTM1-209ENST00000588855 IGLV1-50A0A075B6I6 118 aa11.66□□□□□ -0.54
CLPTM1-209ENST00000588855 SPANXB1Q9NS25 103 aaPredicted RBP11.66□□□□□ -0.54
CLPTM1-209ENST00000588855 DLEU1O43261 78 aa11.65□□□□□ -0.54
CLPTM1-209ENST00000588855 INAFM2P0DMQ5 153 aa11.65□□□□□ -0.54
CLPTM1-209ENST00000588855 MYCBP2O75592 4640 aa11.65□□□□□ -0.54
CLPTM1-209ENST00000588855 Q6ZVH6 145 aa11.65□□□□□ -0.55
CLPTM1-209ENST00000588855 TRBV10-2A0A0K0K1G8 114 aa11.64□□□□□ -0.55
CLPTM1-209ENST00000588855 IFITM1P13164 125 aa11.64□□□□□ -0.55
CLPTM1-209ENST00000588855 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
CLPTM1-209ENST00000588855 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
CLPTM1-209ENST00000588855 MUSTN1Q8IVN3 82 aa11.63□□□□□ -0.55
CLPTM1-209ENST00000588855 FLG2Q5D862 2391 aaPredicted RBP11.62□□□□□ -0.55
CLPTM1-209ENST00000588855 TRBV10-3A0A0K0K1G6 114 aa11.61□□□□□ -0.55
CLPTM1-209ENST00000588855 SRSF9Q13242 221 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLPTM1-209ENST00000588855 COPS9Q8WXC6 57 aa11.61□□□□□ -0.55
CLPTM1-209ENST00000588855 PPDPFQ9H3Y8 114 aa11.61□□□□□ -0.55
CLPTM1-209ENST00000588855 LOC105371267A0A1B0GV96 52 aa11.6□□□□□ -0.55
CLPTM1-209ENST00000588855 TMEM126AQ9H061 195 aa11.6□□□□□ -0.55
CLPTM1-209ENST00000588855 FAT3Q8TDW7 4589 aa11.6□□□□□ -0.55
CLPTM1-209ENST00000588855 BCE1O60756 84 aa11.6□□□□□ -0.55
CLPTM1-209ENST00000588855 DDTP30046 118 aa11.6□□□□□ -0.55
CLPTM1-209ENST00000588855 S100A12P80511 92 aa11.59□□□□□ -0.55
CLPTM1-209ENST00000588855 REG3GQ6UW15 175 aa11.59□□□□□ -0.55
CLPTM1-209ENST00000588855 C2orf91Q6ZV80 131 aa11.59□□□□□ -0.55
CLPTM1-209ENST00000588855 S100A7L2Q5SY68 101 aa11.58□□□□□ -0.56
CLPTM1-209ENST00000588855 LRP1Q07954 4544 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-209ENST00000588855 PRYO14603 147 aa11.57□□□□□ -0.56
CLPTM1-209ENST00000588855 IGLV6-57P01721 117 aa11.57□□□□□ -0.56
CLPTM1-209ENST00000588855 KCNQ1DNQ9H478 68 aa11.57□□□□□ -0.56
CLPTM1-209ENST00000588855 HIGD1BQ9P298 99 aa11.57□□□□□ -0.56
CLPTM1-209ENST00000588855 SMIM6P0DI80 62 aa11.56□□□□□ -0.56
CLPTM1-209ENST00000588855 SPINK6Q6UWN8 80 aa11.56□□□□□ -0.56
CLPTM1-209ENST00000588855 HIST1H4GQ99525 98 aa11.56□□□□□ -0.56
CLPTM1-209ENST00000588855 LINC00337Q8N6G1 96 aa11.55□□□□□ -0.56
CLPTM1-209ENST00000588855 LINC00518Q8N0U6 118 aa11.55□□□□□ -0.56
CLPTM1-209ENST00000588855 ZNF861PO60384 105 aa11.54□□□□□ -0.56
CLPTM1-209ENST00000588855 FAM19A1Q7Z5A9 133 aa11.54□□□□□ -0.56
CLPTM1-209ENST00000588855 OR13C6PQ8NH95 151 aa11.54□□□□□ -0.56
CLPTM1-209ENST00000588855 SPRR1AP35321 89 aa11.53□□□□□ -0.56
CLPTM1-209ENST00000588855 UBE2AP49459 152 aa11.53□□□□□ -0.56
CLPTM1-209ENST00000588855 KRTAP13-1Q8IUC0 172 aa11.53□□□□□ -0.56
CLPTM1-209ENST00000588855 PRLHP81277 87 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms