RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 GAGE2DQ9UEU5 116 aa20.04■□□□□ 0.8
CAPNS1-206ENST00000588815 PRO1854Q9UHT4 67 aa20.04■□□□□ 0.8
CAPNS1-206ENST00000588815 XAGE1AQ9HD64 81 aa20.03■□□□□ 0.8
CAPNS1-206ENST00000588815 DNAH2Q9P225 4427 aa20.02■□□□□ 0.8
CAPNS1-206ENST00000588815 K7ERJ3 54 aa20.01■□□□□ 0.79
CAPNS1-206ENST00000588815 TNP2Q05952 138 aa20.01■□□□□ 0.79
CAPNS1-206ENST00000588815 TRAV13-2A0A0B4J235 113 aa19.99■□□□□ 0.79
CAPNS1-206ENST00000588815 TAX1BP3O14907 124 aa19.99■□□□□ 0.79
CAPNS1-206ENST00000588815 C16orf90A8MZG2 172 aa19.98■□□□□ 0.79
CAPNS1-206ENST00000588815 IGKV2-28A0A075B6P5 120 aa19.97■□□□□ 0.79
CAPNS1-206ENST00000588815 IGKV2D-28P01615 120 aa19.97■□□□□ 0.79
CAPNS1-206ENST00000588815 C9orf129Q5T035 196 aaKnown RBP19.97■□□□□ 0.79
CAPNS1-206ENST00000588815 PLA2G2DQ9UNK4 145 aa19.97■□□□□ 0.79
CAPNS1-206ENST00000588815 GAGE2BQ13066 116 aa19.96■□□□□ 0.79
CAPNS1-206ENST00000588815 TRBV10-2A0A0K0K1G8 114 aa19.94■□□□□ 0.78
CAPNS1-206ENST00000588815 SACSQ9NZJ4 4579 aa19.94■□□□□ 0.78
CAPNS1-206ENST00000588815 DNAH17Q9UFH2 4485 aa19.93■□□□□ 0.78
CAPNS1-206ENST00000588815 HYDINQ4G0P3 5121 aa19.93■□□□□ 0.78
CAPNS1-206ENST00000588815 LINC00337Q8N6G1 96 aa19.92■□□□□ 0.78
CAPNS1-206ENST00000588815 PGPEP1Q9NXJ5 209 aa19.92■□□□□ 0.78
CAPNS1-206ENST00000588815 C9orf118A6NHY6 69 aa19.91■□□□□ 0.78
CAPNS1-206ENST00000588815 VPREB1P12018 145 aa19.91■□□□□ 0.78
CAPNS1-206ENST00000588815 SDIM1Q6ZPB5 146 aa19.91■□□□□ 0.78
CAPNS1-206ENST00000588815 LINC00336Q6ZUF6 198 aa19.91■□□□□ 0.78
CAPNS1-206ENST00000588815 FRAS1Q86XX4 4008 aa19.9■□□□□ 0.78
CAPNS1-206ENST00000588815 A0A096LNI7 61 aa19.9■□□□□ 0.78
CAPNS1-206ENST00000588815 Q8NDZ9 215 aa19.9■□□□□ 0.78
CAPNS1-206ENST00000588815 LINC00474Q9P2X8 69 aa19.9■□□□□ 0.78
CAPNS1-206ENST00000588815 IGLV5-52A0A0A0MRZ9 124 aa19.89■□□□□ 0.77
CAPNS1-206ENST00000588815 RPL13AP40429 203 aaKnown RBP19.89■□□□□ 0.77
CAPNS1-206ENST00000588815 TSPAN13O95857 204 aa19.86■□□□□ 0.77
CAPNS1-206ENST00000588815 TMEM126AQ9H061 195 aa19.86■□□□□ 0.77
CAPNS1-206ENST00000588815 IGLV5-37A0A075B6J1 123 aa19.85■□□□□ 0.77
CAPNS1-206ENST00000588815 PRR3P79522 188 aaKnown RBP19.85■□□□□ 0.77
CAPNS1-206ENST00000588815 M0R378 163 aa19.84■□□□□ 0.77
CAPNS1-206ENST00000588815 NCR3O14931 201 aa19.84■□□□□ 0.77
CAPNS1-206ENST00000588815 Q1RN00 199 aa19.84■□□□□ 0.77
CAPNS1-206ENST00000588815 OR13C6PQ8NH95 151 aa19.83■□□□□ 0.76
CAPNS1-206ENST00000588815 IGKV2-24A0A0C4DH68 120 aa19.82■□□□□ 0.76
CAPNS1-206ENST00000588815 H3BUT2 72 aa19.82■□□□□ 0.76
CAPNS1-206ENST00000588815 NKAPP1Q8N9T2 125 aa19.82■□□□□ 0.76
CAPNS1-206ENST00000588815 S100A7L2Q5SY68 101 aa19.81■□□□□ 0.76
CAPNS1-206ENST00000588815 H7C2G1 150 aa19.8■□□□□ 0.76
CAPNS1-206ENST00000588815 LINC01620Q4KN68 170 aa19.79■□□□□ 0.76
CAPNS1-206ENST00000588815 SERTAD4-AS1Q5TG53 156 aa19.79■□□□□ 0.76
CAPNS1-206ENST00000588815 IGLV6-57P01721 117 aa19.78■□□□□ 0.76
CAPNS1-206ENST00000588815 CBY1Q9Y3M2 126 aa19.78■□□□□ 0.76
CAPNS1-206ENST00000588815 LYRM7Q5U5X0 104 aa19.76■□□□□ 0.75
CAPNS1-206ENST00000588815 A0A1W2PPM0 123 aa19.75■□□□□ 0.75
CAPNS1-206ENST00000588815 RPL28P46779 137 aaKnown RBP19.75■□□□□ 0.75
CAPNS1-206ENST00000588815 FAM168BA1KXE4 195 aa19.74■□□□□ 0.75
CAPNS1-206ENST00000588815 PSMB2P49721 201 aa19.74■□□□□ 0.75
CAPNS1-206ENST00000588815 NAA38Q9BRA0 125 aaKnown RBP19.74■□□□□ 0.75
CAPNS1-206ENST00000588815 KRTAP10-2P60368 255 aa19.73■□□□□ 0.75
CAPNS1-206ENST00000588815 COX6CP09669 75 aa19.73■□□□□ 0.75
CAPNS1-206ENST00000588815 CHTF8P0CG12 524 aa19.73■□□□□ 0.75
CAPNS1-206ENST00000588815 HECTD4Q9Y4D8 3996 aa19.72■□□□□ 0.75
CAPNS1-206ENST00000588815 FABP2P12104 132 aa19.72■□□□□ 0.75
CAPNS1-206ENST00000588815 FAM19A5Q7Z5A7 132 aaPredicted RBP19.72■□□□□ 0.75
CAPNS1-206ENST00000588815 KRTAP7-1Q8IUC3 87 aa19.72■□□□□ 0.75
CAPNS1-206ENST00000588815 SPACA4Q8TDM5 124 aa19.72■□□□□ 0.75
CAPNS1-206ENST00000588815 C22orf24Q9Y442 160 aa19.72■□□□□ 0.75
CAPNS1-206ENST00000588815 SMIM11BQ8TCY0 68 aa19.71■□□□□ 0.75
CAPNS1-206ENST00000588815 TRBV10-3A0A0K0K1G6 114 aa19.7■□□□□ 0.74
CAPNS1-206ENST00000588815 FUSP35637 526 aaKnown RBP eCLIP19.7■□□□□ 0.74
CAPNS1-206ENST00000588815 TRIAP1O43715 76 aa19.69■□□□□ 0.74
CAPNS1-206ENST00000588815 MRPL55Q7Z7F7 128 aaKnown RBP19.69■□□□□ 0.74
CAPNS1-206ENST00000588815 C7orf33Q8WU49 177 aa19.69■□□□□ 0.74
CAPNS1-206ENST00000588815 A0A1B0GV90 55 aa19.67■□□□□ 0.74
CAPNS1-206ENST00000588815 A0A1W2PNN7 141 aa19.67■□□□□ 0.74
CAPNS1-206ENST00000588815 FAT2Q9NYQ8 4349 aa19.67■□□□□ 0.74
CAPNS1-206ENST00000588815 M0QXV9 152 aa19.66■□□□□ 0.74
CAPNS1-206ENST00000588815 SCGB1C2P0DMR2 95 aa19.66■□□□□ 0.74
CAPNS1-206ENST00000588815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP19.66■□□□□ 0.74
CAPNS1-206ENST00000588815 EPM2AB3EWF7 344 aa19.65■□□□□ 0.74
CAPNS1-206ENST00000588815 TRAV23DV6A0A075B6W5 121 aa19.64■□□□□ 0.73
CAPNS1-206ENST00000588815 DPH3Q96FX2 82 aa19.64■□□□□ 0.73
CAPNS1-206ENST00000588815 VAMP3Q15836 100 aa19.63■□□□□ 0.73
CAPNS1-206ENST00000588815 LINC00167Q96N53 147 aa19.63■□□□□ 0.73
CAPNS1-206ENST00000588815 PANO1I0J062 215 aa19.62■□□□□ 0.73
CAPNS1-206ENST00000588815 RYR2Q92736 4967 aa19.61■□□□□ 0.73
CAPNS1-206ENST00000588815 KMT2CQ8NEZ4 4911 aaKnown RBP19.61■□□□□ 0.73
CAPNS1-206ENST00000588815 IGLV1-50A0A075B6I6 118 aa19.6■□□□□ 0.73
CAPNS1-206ENST00000588815 TRBV20-1A0A075B6N2 111 aa19.6■□□□□ 0.73
CAPNS1-206ENST00000588815 KCNQ1DNQ9H478 68 aa19.6■□□□□ 0.73
CAPNS1-206ENST00000588815 GAGE10A6NGK3 116 aa19.6■□□□□ 0.73
CAPNS1-206ENST00000588815 DNAH11Q96DT5 4516 aa19.59■□□□□ 0.73
CAPNS1-206ENST00000588815 H0YGX0 51 aa19.59■□□□□ 0.73
CAPNS1-206ENST00000588815 SPCS1Q9Y6A9 102 aa19.59■□□□□ 0.73
CAPNS1-206ENST00000588815 A0A087WYN8 130 aa19.57■□□□□ 0.72
CAPNS1-206ENST00000588815 PRYO14603 147 aa19.57■□□□□ 0.72
CAPNS1-206ENST00000588815 GTF2H5Q6ZYL4 71 aa19.57■□□□□ 0.72
CAPNS1-206ENST00000588815 ZNF73O43830 326 aaPredicted RBP19.56■□□□□ 0.72
CAPNS1-206ENST00000588815 C6orf99Q4VX62 202 aa19.56■□□□□ 0.72
CAPNS1-206ENST00000588815 DIRC1Q969H9 104 aa19.56■□□□□ 0.72
CAPNS1-206ENST00000588815 A0A1B0GVY2 172 aa19.55■□□□□ 0.72
CAPNS1-206ENST00000588815 PLAC8Q9NZF1 115 aa19.55■□□□□ 0.72
CAPNS1-206ENST00000588815 TRBV7-6A0A0J9YX20 115 aa19.54■□□□□ 0.72
CAPNS1-206ENST00000588815 K7EP34 96 aa19.54■□□□□ 0.72
CAPNS1-206ENST00000588815 PKD1P98161 4303 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms