RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 IGLC3P0DOY3 106 aa7.73□□□□□ -1.17
CLPTM1-208ENST00000588274 LINC01547P58512 204 aaPredicted RBP7.73□□□□□ -1.17
CLPTM1-208ENST00000588274 TMEM238LA0A1B0GVL6 79 aa7.72□□□□□ -1.17
CLPTM1-208ENST00000588274 PMVKQ15126 192 aa7.72□□□□□ -1.17
CLPTM1-208ENST00000588274 COMMD7Q86VX2 200 aa7.72□□□□□ -1.17
CLPTM1-208ENST00000588274 HIGD2AQ9BW72 106 aa7.72□□□□□ -1.17
CLPTM1-208ENST00000588274 GNB1LQ9BYB4 327 aa7.72□□□□□ -1.17
CLPTM1-208ENST00000588274 MRPL18Q9H0U6 180 aaKnown RBP7.72□□□□□ -1.17
CLPTM1-208ENST00000588274 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.18
CLPTM1-208ENST00000588274 DAND5Q8N907 189 aa7.71□□□□□ -1.18
CLPTM1-208ENST00000588274 Q8NBF4 154 aa7.71□□□□□ -1.18
CLPTM1-208ENST00000588274 A0A096LNJ9 63 aa7.7□□□□□ -1.18
CLPTM1-208ENST00000588274 H3BRM9 83 aa7.69□□□□□ -1.18
CLPTM1-208ENST00000588274 COX17Q14061 63 aa7.69□□□□□ -1.18
CLPTM1-208ENST00000588274 ZNF625Q96I27 306 aaPredicted RBP7.69□□□□□ -1.18
CLPTM1-208ENST00000588274 LINC01549A6NIU2 74 aa7.68□□□□□ -1.18
CLPTM1-208ENST00000588274 KRTAP4-16G5E9R7 235 aaPredicted RBP7.68□□□□□ -1.18
CLPTM1-208ENST00000588274 SPRR1AP35321 89 aa7.68□□□□□ -1.18
CLPTM1-208ENST00000588274 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
CLPTM1-208ENST00000588274 LINC00337Q8N6G1 96 aa7.68□□□□□ -1.18
CLPTM1-208ENST00000588274 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
CLPTM1-208ENST00000588274 LINC00483Q53H64 154 aa7.67□□□□□ -1.18
CLPTM1-208ENST00000588274 XP32Q5T750 250 aa7.67□□□□□ -1.18
CLPTM1-208ENST00000588274 SPINK1P00995 79 aa7.66□□□□□ -1.18
CLPTM1-208ENST00000588274 S100A12P80511 92 aa7.66□□□□□ -1.18
CLPTM1-208ENST00000588274 Q8N377 158 aa7.66□□□□□ -1.18
CLPTM1-208ENST00000588274 SMCR5Q8TEV8 140 aa7.65□□□□□ -1.18
CLPTM1-208ENST00000588274 URB1-AS1Q96HZ7 61 aa7.65□□□□□ -1.18
CLPTM1-208ENST00000588274 MT1HP80294 61 aa7.64□□□□□ -1.19
CLPTM1-208ENST00000588274 ZNF706Q9Y5V0 76 aaPredicted RBP7.64□□□□□ -1.19
CLPTM1-208ENST00000588274 TRAV9-1A0A075B6T8 112 aa7.63□□□□□ -1.19
CLPTM1-208ENST00000588274 C11orf86A6NJI1 115 aa7.63□□□□□ -1.19
CLPTM1-208ENST00000588274 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
CLPTM1-208ENST00000588274 PRYO14603 147 aa7.62□□□□□ -1.19
CLPTM1-208ENST00000588274 ANKRD39Q53RE8 183 aa7.62□□□□□ -1.19
CLPTM1-208ENST00000588274 C4orf48Q5BLP8 95 aa7.62□□□□□ -1.19
CLPTM1-208ENST00000588274 UQCC3Q6UW78 93 aa7.62□□□□□ -1.19
CLPTM1-208ENST00000588274 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
CLPTM1-208ENST00000588274 SFTA2Q6UW10 78 aa7.6□□□□□ -1.19
CLPTM1-208ENST00000588274 FA2HQ7L5A8 372 aa7.6□□□□□ -1.19
CLPTM1-208ENST00000588274 ERC2-IT1O76042 136 aa7.59□□□□□ -1.19
CLPTM1-208ENST00000588274 TMEM218A2RU14 115 aa7.58□□□□□ -1.2
CLPTM1-208ENST00000588274 NCR3O14931 201 aa7.58□□□□□ -1.2
CLPTM1-208ENST00000588274 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
CLPTM1-208ENST00000588274 MOBPQ13875 183 aa7.58□□□□□ -1.2
CLPTM1-208ENST00000588274 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
CLPTM1-208ENST00000588274 LINC00158P58513 81 aa7.57□□□□□ -1.2
CLPTM1-208ENST00000588274 FAM19A2Q8N3H0 131 aa7.57□□□□□ -1.2
CLPTM1-208ENST00000588274 SMCO4Q9NRQ5 59 aa7.57□□□□□ -1.2
CLPTM1-208ENST00000588274 TRBV10-3A0A0K0K1G6 114 aa7.56□□□□□ -1.2
CLPTM1-208ENST00000588274 NDUFA6P56556 154 aa7.56□□□□□ -1.2
CLPTM1-208ENST00000588274 PMCHL1Q16048 86 aa7.56□□□□□ -1.2
CLPTM1-208ENST00000588274 TMEM170BQ5T4T1 132 aa7.56□□□□□ -1.2
CLPTM1-208ENST00000588274 Q9BRP9 147 aa7.56□□□□□ -1.2
CLPTM1-208ENST00000588274 TMEM223A0PJW6 202 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 A6NJY4 79 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 B5MCH6 92 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 HBDP02042 147 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 GAGE2AQ6NT46 116 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 C18orf32Q8TCD1 76 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 SEC11CQ9BY50 192 aa7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 FLGP20930 4061 aaPredicted RBP7.55□□□□□ -1.2
CLPTM1-208ENST00000588274 IGLV9-49A0A0B4J1Y8 123 aa7.54□□□□□ -1.2
CLPTM1-208ENST00000588274 SLC25A20O43772 301 aa7.54□□□□□ -1.2
CLPTM1-208ENST00000588274 APOC3P02656 99 aa7.54□□□□□ -1.2
CLPTM1-208ENST00000588274 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
CLPTM1-208ENST00000588274 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
CLPTM1-208ENST00000588274 NDUFA12Q9UI09 145 aa7.54□□□□□ -1.2
CLPTM1-208ENST00000588274 ETDCA0A1B0GVM5 59 aa7.53□□□□□ -1.2
CLPTM1-208ENST00000588274 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
CLPTM1-208ENST00000588274 C10orf91Q5T1B1 145 aa7.53□□□□□ -1.2
CLPTM1-208ENST00000588274 MIR7-3HGQ8N6C7 128 aa7.53□□□□□ -1.2
CLPTM1-208ENST00000588274 LINC00614P0C842 121 aa7.52□□□□□ -1.21
CLPTM1-208ENST00000588274 KRTAP10-6P60371 365 aaPredicted RBP7.52□□□□□ -1.21
CLPTM1-208ENST00000588274 COX19Q49B96 90 aa7.52□□□□□ -1.21
CLPTM1-208ENST00000588274 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
CLPTM1-208ENST00000588274 S100PP25815 95 aa7.5□□□□□ -1.21
CLPTM1-208ENST00000588274 Q6ZRX8 168 aa7.5□□□□□ -1.21
CLPTM1-208ENST00000588274 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
CLPTM1-208ENST00000588274 LOC107984156A0A0G2JMH3 177 aa7.49□□□□□ -1.21
CLPTM1-208ENST00000588274 SNAPINO95295 136 aa7.49□□□□□ -1.21
CLPTM1-208ENST00000588274 PCOTHQ58A44 107 aa7.49□□□□□ -1.21
CLPTM1-208ENST00000588274 ARL17AQ8IVW1 177 aa7.49□□□□□ -1.21
CLPTM1-208ENST00000588274 SVBPQ8N300 66 aa7.49□□□□□ -1.21
CLPTM1-208ENST00000588274 LINC00518Q8N0U6 118 aa7.48□□□□□ -1.21
CLPTM1-208ENST00000588274 TRAV12-1A0A0B4J245 112 aa7.47□□□□□ -1.21
CLPTM1-208ENST00000588274 TSPEAR-AS2P59090 65 aa7.47□□□□□ -1.21
CLPTM1-208ENST00000588274 PCP4L1A6NKN8 68 aa7.46□□□□□ -1.22
CLPTM1-208ENST00000588274 HERV-K104P63124 156 aa7.46□□□□□ -1.22
CLPTM1-208ENST00000588274 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
CLPTM1-208ENST00000588274 IGLV8-61A0A075B6I0 122 aa7.45□□□□□ -1.22
CLPTM1-208ENST00000588274 TRBV10-2A0A0K0K1G8 114 aa7.45□□□□□ -1.22
CLPTM1-208ENST00000588274 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
CLPTM1-208ENST00000588274 DDTP30046 118 aa7.45□□□□□ -1.22
CLPTM1-208ENST00000588274 RPS10P5Q9NQ39 176 aa7.45□□□□□ -1.22
CLPTM1-208ENST00000588274 RHEBQ15382 184 aa7.44□□□□□ -1.22
CLPTM1-208ENST00000588274 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
CLPTM1-208ENST00000588274 CBY1Q9Y3M2 126 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms