RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-215ENST00000588030 HMCN2Q8NDA2 5059 aa12.14□□□□□ -0.47
CIRBP-215ENST00000588030 COX17Q14061 63 aa12.14□□□□□ -0.47
CIRBP-215ENST00000588030 LBHQ53QV2 105 aaPredicted RBP12.14□□□□□ -0.47
CIRBP-215ENST00000588030 MRPL55Q7Z7F7 128 aaKnown RBP12.14□□□□□ -0.47
CIRBP-215ENST00000588030 SND1-IT1Q9HBX3 110 aa12.14□□□□□ -0.47
CIRBP-215ENST00000588030 TNXBP22105 4242 aa12.13□□□□□ -0.47
CIRBP-215ENST00000588030 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
CIRBP-215ENST00000588030 SYS1-DBNDD2H3BUS1 97 aa12.12□□□□□ -0.47
CIRBP-215ENST00000588030 NKAPP1Q8N9T2 125 aa12.12□□□□□ -0.47
CIRBP-215ENST00000588030 NDUFA12Q9UI09 145 aa12.12□□□□□ -0.47
CIRBP-215ENST00000588030 IGLV7-43P04211 117 aa12.11□□□□□ -0.47
CIRBP-215ENST00000588030 HERVK_113P61574 105 aa12.11□□□□□ -0.47
CIRBP-215ENST00000588030 MEIG1Q5JSS6 88 aa12.11□□□□□ -0.47
CIRBP-215ENST00000588030 PLA2G2DQ9UNK4 145 aa12.11□□□□□ -0.47
CIRBP-215ENST00000588030 RPL37AP8A6NKH3 93 aa12.11□□□□□ -0.47
CIRBP-215ENST00000588030 TSPEAR-AS2P59090 65 aa12.11□□□□□ -0.47
CIRBP-215ENST00000588030 TP73-AS1Q9UF72 201 aa12.11□□□□□ -0.47
CIRBP-215ENST00000588030 LEPROTO15243 131 aa12.1□□□□□ -0.47
CIRBP-215ENST00000588030 SMIM13P0DJ93 91 aa12.1□□□□□ -0.47
CIRBP-215ENST00000588030 LINC00167Q96N53 147 aa12.1□□□□□ -0.47
CIRBP-215ENST00000588030 COA6Q5JTJ3 125 aaKnown RBP12.09□□□□□ -0.47
CIRBP-215ENST00000588030 PLEKHB2Q96CS7 222 aa12.09□□□□□ -0.47
CIRBP-215ENST00000588030 LINC01600Q96MT4 127 aa12.09□□□□□ -0.47
CIRBP-215ENST00000588030 MYMXA0A1B0GTQ4 84 aa12.08□□□□□ -0.48
CIRBP-215ENST00000588030 REG3GQ6UW15 175 aa12.08□□□□□ -0.48
CIRBP-215ENST00000588030 J3QQQ9 107 aa12.07□□□□□ -0.48
CIRBP-215ENST00000588030 HERV-K104P63124 156 aa12.07□□□□□ -0.48
CIRBP-215ENST00000588030 IGLV5-37A0A075B6J1 123 aa12.06□□□□□ -0.48
CIRBP-215ENST00000588030 LGALS3P17931 250 aaKnown RBP12.06□□□□□ -0.48
CIRBP-215ENST00000588030 KRTDAPP60985 99 aa12.06□□□□□ -0.48
CIRBP-215ENST00000588030 C3orf79P0CE67 100 aa12.05□□□□□ -0.48
CIRBP-215ENST00000588030 VPREB1P12018 145 aa12.05□□□□□ -0.48
CIRBP-215ENST00000588030 RPL24P83731 157 aaKnown RBP12.05□□□□□ -0.48
CIRBP-215ENST00000588030 PET117Q6UWS5 81 aa12.05□□□□□ -0.48
CIRBP-215ENST00000588030 Q8NDZ9 215 aa12.05□□□□□ -0.48
CIRBP-215ENST00000588030 IGKV2-28A0A075B6P5 120 aa12.04□□□□□ -0.48
CIRBP-215ENST00000588030 IGKV2D-28P01615 120 aa12.04□□□□□ -0.48
CIRBP-215ENST00000588030 LINC01545Q5VT33 79 aa12.04□□□□□ -0.48
CIRBP-215ENST00000588030 MIR7-3HGQ8N6C7 128 aa12.04□□□□□ -0.48
CIRBP-215ENST00000588030 DIRC1Q969H9 104 aa12.03□□□□□ -0.48
CIRBP-215ENST00000588030 S100A2P29034 98 aa12.02□□□□□ -0.48
CIRBP-215ENST00000588030 LINC00587B1AMM8 73 aa12.01□□□□□ -0.49
CIRBP-215ENST00000588030 KRTAP10-8P60410 259 aa12.01□□□□□ -0.49
CIRBP-215ENST00000588030 DAND5Q8N907 189 aa12.01□□□□□ -0.49
CIRBP-215ENST00000588030 E9PLD3 99 aa12.01□□□□□ -0.49
CIRBP-215ENST00000588030 H0Y9J4 135 aa12□□□□□ -0.49
CIRBP-215ENST00000588030 NMUP48645 174 aa12□□□□□ -0.49
CIRBP-215ENST00000588030 BOD1L2Q8IYS8 172 aa12□□□□□ -0.49
CIRBP-215ENST00000588030 BCE1O60756 84 aa11.99□□□□□ -0.49
CIRBP-215ENST00000588030 ZNF861PO60384 105 aa11.98□□□□□ -0.49
CIRBP-215ENST00000588030 HIST3H2BBQ8N257 126 aa11.98□□□□□ -0.49
CIRBP-215ENST00000588030 PCP4L1A6NKN8 68 aa11.97□□□□□ -0.49
CIRBP-215ENST00000588030 IGLV1-50A0A075B6I6 118 aa11.96□□□□□ -0.49
CIRBP-215ENST00000588030 C20orf202A1L168 122 aa11.96□□□□□ -0.5
CIRBP-215ENST00000588030 TMEM238C9JI98 176 aa11.96□□□□□ -0.5
CIRBP-215ENST00000588030 NCR3O14931 201 aa11.96□□□□□ -0.5
CIRBP-215ENST00000588030 RPL28P46779 137 aaKnown RBP11.95□□□□□ -0.5
CIRBP-215ENST00000588030 UBE2AP49459 152 aa11.94□□□□□ -0.5
CIRBP-215ENST00000588030 ATOH7Q8N100 152 aa11.94□□□□□ -0.5
CIRBP-215ENST00000588030 A0A0J9YXY3 114 aa11.93□□□□□ -0.5
CIRBP-215ENST00000588030 M0R378 163 aa11.93□□□□□ -0.5
CIRBP-215ENST00000588030 IGKV2D-26A0A0A0MRZ7 120 aa11.92□□□□□ -0.5
CIRBP-215ENST00000588030 PYY3Q5JQD4 70 aa11.92□□□□□ -0.5
CIRBP-215ENST00000588030 TMEM126AQ9H061 195 aa11.92□□□□□ -0.5
CIRBP-215ENST00000588030 NPC2P61916 151 aa11.91□□□□□ -0.5
CIRBP-215ENST00000588030 MIEN1Q9BRT3 115 aa11.91□□□□□ -0.5
CIRBP-215ENST00000588030 TTTY13Q9BZ97 58 aa11.91□□□□□ -0.5
CIRBP-215ENST00000588030 FAM19A1Q7Z5A9 133 aa11.91□□□□□ -0.5
CIRBP-215ENST00000588030 PRR26Q8N8Z3 221 aa11.91□□□□□ -0.5
CIRBP-215ENST00000588030 ZNF815PA8K554 130 aa11.9□□□□□ -0.5
CIRBP-215ENST00000588030 PRLHP81277 87 aa11.9□□□□□ -0.5
CIRBP-215ENST00000588030 ADAMTSL4-AS1Q5T5F5 129 aa11.9□□□□□ -0.5
CIRBP-215ENST00000588030 HIST1H2BLQ99880 126 aa11.9□□□□□ -0.5
CIRBP-215ENST00000588030 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
CIRBP-215ENST00000588030 UBR4Q5T4S7 5183 aa11.89□□□□□ -0.51
CIRBP-215ENST00000588030 KRTAP1-4P0C5Y4 121 aa11.88□□□□□ -0.51
CIRBP-215ENST00000588030 KRTAP13-1Q8IUC0 172 aa11.86□□□□□ -0.51
CIRBP-215ENST00000588030 LOC107984156A0A0G2JMH3 177 aa11.86□□□□□ -0.51
CIRBP-215ENST00000588030 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
CIRBP-215ENST00000588030 ARL17AQ8IVW1 177 aa11.86□□□□□ -0.51
CIRBP-215ENST00000588030 TRBV10-3A0A0K0K1G6 114 aa11.85□□□□□ -0.51
CIRBP-215ENST00000588030 EIF4EBP3O60516 100 aaPredicted RBP11.85□□□□□ -0.51
CIRBP-215ENST00000588030 SOSTDC1Q6X4U4 206 aa11.85□□□□□ -0.51
CIRBP-215ENST00000588030 TSTD3H0UI37 97 aa11.82□□□□□ -0.52
CIRBP-215ENST00000588030 LITAFQ99732 161 aa11.82□□□□□ -0.52
CIRBP-215ENST00000588030 PRYO14603 147 aa11.81□□□□□ -0.52
CIRBP-215ENST00000588030 SCGB1D4Q6XE38 83 aa11.81□□□□□ -0.52
CIRBP-215ENST00000588030 SPANXB1Q9NS25 103 aaPredicted RBP11.81□□□□□ -0.52
CIRBP-215ENST00000588030 DDTP30046 118 aa11.81□□□□□ -0.52
CIRBP-215ENST00000588030 HIGD2AQ9BW72 106 aa11.81□□□□□ -0.52
CIRBP-215ENST00000588030 ANAPC11Q9NYG5 84 aa11.81□□□□□ -0.52
CIRBP-215ENST00000588030 TRBV10-2A0A0K0K1G8 114 aa11.8□□□□□ -0.52
CIRBP-215ENST00000588030 TIMM17BO60830 172 aa11.8□□□□□ -0.52
CIRBP-215ENST00000588030 NDUFC2O95298 119 aa11.8□□□□□ -0.52
CIRBP-215ENST00000588030 S100A7L2Q5SY68 101 aa11.8□□□□□ -0.52
CIRBP-215ENST00000588030 LINC00308Q8TCZ7 52 aa11.8□□□□□ -0.52
CIRBP-215ENST00000588030 KCNQ1DNQ9H478 68 aa11.8□□□□□ -0.52
CIRBP-215ENST00000588030 LRP2P98164 4655 aa11.79□□□□□ -0.52
CIRBP-215ENST00000588030 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
CIRBP-215ENST00000588030 ETDCA0A1B0GVM5 59 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms