RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 TMEM238C9JI98 176 aa8.74□□□□□ -1.01
HDAC5-206ENST00000587776 IGLV5-39A0A0G2JS06 123 aa8.73□□□□□ -1.01
HDAC5-206ENST00000587776 KRTAP9-6A0A140TA67 174 aa8.73□□□□□ -1.01
HDAC5-206ENST00000587776 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
HDAC5-206ENST00000587776 CTAG1AP78358 180 aa8.73□□□□□ -1.01
HDAC5-206ENST00000587776 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
HDAC5-206ENST00000587776 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
HDAC5-206ENST00000587776 ATP6V1G1O75348 118 aa8.72□□□□□ -1.01
HDAC5-206ENST00000587776 VPREB1P12018 145 aa8.72□□□□□ -1.01
HDAC5-206ENST00000587776 RPL24P83731 157 aaKnown RBP8.72□□□□□ -1.01
HDAC5-206ENST00000587776 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
HDAC5-206ENST00000587776 SND1-IT1Q9HBX3 110 aa8.72□□□□□ -1.01
HDAC5-206ENST00000587776 C11orf86A6NJI1 115 aa8.71□□□□□ -1.02
HDAC5-206ENST00000587776 NDUFA6P56556 154 aa8.71□□□□□ -1.02
HDAC5-206ENST00000587776 CHCHD1Q96BP2 118 aaKnown RBP8.71□□□□□ -1.02
HDAC5-206ENST00000587776 HIGD2AQ9BW72 106 aa8.71□□□□□ -1.02
HDAC5-206ENST00000587776 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
HDAC5-206ENST00000587776 BAGE3Q86Y29 109 aa8.7□□□□□ -1.02
HDAC5-206ENST00000587776 PLEKHB2Q96CS7 222 aa8.7□□□□□ -1.02
HDAC5-206ENST00000587776 M0R378 163 aa8.69□□□□□ -1.02
HDAC5-206ENST00000587776 TRGC2P03986 189 aa8.69□□□□□ -1.02
HDAC5-206ENST00000587776 LINC00310P59036 64 aa8.69□□□□□ -1.02
HDAC5-206ENST00000587776 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
HDAC5-206ENST00000587776 COX17Q14061 63 aa8.68□□□□□ -1.02
HDAC5-206ENST00000587776 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
HDAC5-206ENST00000587776 SPAG11AQ6PDA7 123 aa8.68□□□□□ -1.02
HDAC5-206ENST00000587776 LINC00337Q8N6G1 96 aa8.67□□□□□ -1.02
HDAC5-206ENST00000587776 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
HDAC5-206ENST00000587776 COLCA2A8K830 154 aa8.66□□□□□ -1.02
HDAC5-206ENST00000587776 FAM19A2Q8N3H0 131 aa8.66□□□□□ -1.02
HDAC5-206ENST00000587776 IFI27L1Q96BM0 104 aa8.66□□□□□ -1.02
HDAC5-206ENST00000587776 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
HDAC5-206ENST00000587776 FP248Q71RG6 208 aaPredicted RBP8.65□□□□□ -1.02
HDAC5-206ENST00000587776 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
HDAC5-206ENST00000587776 TMEM170BQ5T4T1 132 aa8.64□□□□□ -1.03
HDAC5-206ENST00000587776 Q8NDZ9 215 aa8.64□□□□□ -1.03
HDAC5-206ENST00000587776 SPRR4Q96PI1 79 aa8.64□□□□□ -1.03
HDAC5-206ENST00000587776 MUC17Q685J3 4493 aa8.63□□□□□ -1.03
HDAC5-206ENST00000587776 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
HDAC5-206ENST00000587776 HSBP1O75506 76 aa8.63□□□□□ -1.03
HDAC5-206ENST00000587776 SERF1AO75920 110 aa8.63□□□□□ -1.03
HDAC5-206ENST00000587776 SFTA2Q6UW10 78 aa8.63□□□□□ -1.03
HDAC5-206ENST00000587776 LINC00158P58513 81 aa8.62□□□□□ -1.03
HDAC5-206ENST00000587776 DAND5Q8N907 189 aa8.61□□□□□ -1.03
HDAC5-206ENST00000587776 Q8NBF4 154 aa8.61□□□□□ -1.03
HDAC5-206ENST00000587776 LINC01547P58512 204 aaPredicted RBP8.6□□□□□ -1.03
HDAC5-206ENST00000587776 A0A0U1RRA0 63 aa8.59□□□□□ -1.03
HDAC5-206ENST00000587776 PRYO14603 147 aa8.58□□□□□ -1.04
HDAC5-206ENST00000587776 LEPROTL1O95214 131 aa8.58□□□□□ -1.04
HDAC5-206ENST00000587776 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
HDAC5-206ENST00000587776 ASB16-AS1Q495Z4 193 aa8.57□□□□□ -1.04
HDAC5-206ENST00000587776 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
HDAC5-206ENST00000587776 ETDCA0A1B0GVM5 59 aa8.56□□□□□ -1.04
HDAC5-206ENST00000587776 NCR3O14931 201 aa8.56□□□□□ -1.04
HDAC5-206ENST00000587776 SPINK1P00995 79 aa8.56□□□□□ -1.04
HDAC5-206ENST00000587776 SEC61BP60468 96 aaKnown RBP8.55□□□□□ -1.04
HDAC5-206ENST00000587776 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
HDAC5-206ENST00000587776 SMCR5Q8TEV8 140 aa8.55□□□□□ -1.04
HDAC5-206ENST00000587776 H0Y8G0 127 aa8.54□□□□□ -1.04
HDAC5-206ENST00000587776 MEIG1Q5JSS6 88 aa8.54□□□□□ -1.04
HDAC5-206ENST00000587776 SMIM13P0DJ93 91 aa8.53□□□□□ -1.04
HDAC5-206ENST00000587776 FABP4P15090 132 aa8.53□□□□□ -1.04
HDAC5-206ENST00000587776 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
HDAC5-206ENST00000587776 HIST1H2BKO60814 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST1H2BJP06899 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST1H2BOP23527 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST1H2BBP33778 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST1H2BDP58876 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST1H2BCP62807 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 S100A12P80511 92 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST2H2BEQ16778 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.52□□□□□ -1.05
HDAC5-206ENST00000587776 GAGE2AQ6NT46 116 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST1H2BHQ93079 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST1H2BNQ99877 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HIST1H2BMQ99879 126 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 HSPB8Q9UJY1 196 aa8.52□□□□□ -1.05
HDAC5-206ENST00000587776 IGLV9-49A0A0B4J1Y8 123 aa8.51□□□□□ -1.05
HDAC5-206ENST00000587776 MOBPQ13875 183 aa8.51□□□□□ -1.05
HDAC5-206ENST00000587776 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
HDAC5-206ENST00000587776 KCNQ1DNQ9H478 68 aa8.51□□□□□ -1.05
HDAC5-206ENST00000587776 SPRR1AP35321 89 aa8.5□□□□□ -1.05
HDAC5-206ENST00000587776 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
HDAC5-206ENST00000587776 TRBV10-3A0A0K0K1G6 114 aa8.49□□□□□ -1.05
HDAC5-206ENST00000587776 S100A6P06703 90 aa8.49□□□□□ -1.05
HDAC5-206ENST00000587776 PLNP26678 52 aa8.49□□□□□ -1.05
HDAC5-206ENST00000587776 HERV-K104P63124 156 aa8.49□□□□□ -1.05
HDAC5-206ENST00000587776 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
HDAC5-206ENST00000587776 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
HDAC5-206ENST00000587776 LEPROTO15243 131 aa8.48□□□□□ -1.05
HDAC5-206ENST00000587776 DPM2O94777 84 aa8.48□□□□□ -1.05
HDAC5-206ENST00000587776 KRTAP4-16G5E9R7 235 aaPredicted RBP8.47□□□□□ -1.05
HDAC5-206ENST00000587776 IGKCP01834 107 aa8.47□□□□□ -1.05
HDAC5-206ENST00000587776 Q8N377 158 aa8.47□□□□□ -1.05
HDAC5-206ENST00000587776 MYMXA0A1B0GTQ4 84 aa8.46□□□□□ -1.06
HDAC5-206ENST00000587776 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
HDAC5-206ENST00000587776 SLC25A20O43772 301 aa8.46□□□□□ -1.06
HDAC5-206ENST00000587776 RPS29P62273 56 aaKnown RBP8.46□□□□□ -1.06
HDAC5-206ENST00000587776 MAP1LC3CQ9BXW4 147 aa8.46□□□□□ -1.06
HDAC5-206ENST00000587776 J3QQQ9 107 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms