RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 POLQO75417 2590 aa11.16□□□□□ -0.62
RANBP3-209ENST00000587411 TRAV10A0A0B4J240 114 aa11.15□□□□□ -0.62
RANBP3-209ENST00000587411 LYRM9A8MSI8 78 aa11.15□□□□□ -0.62
RANBP3-209ENST00000587411 C10orf25Q5T742 122 aa11.15□□□□□ -0.62
RANBP3-209ENST00000587411 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
RANBP3-209ENST00000587411 DIRC1Q969H9 104 aa11.14□□□□□ -0.63
RANBP3-209ENST00000587411 AKAP9Q99996 3911 aa11.14□□□□□ -0.63
RANBP3-209ENST00000587411 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
RANBP3-209ENST00000587411 NDUFC1O43677 76 aa11.13□□□□□ -0.63
RANBP3-209ENST00000587411 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
RANBP3-209ENST00000587411 SETXQ7Z333 2677 aaKnown RBP11.13□□□□□ -0.63
RANBP3-209ENST00000587411 TRBV7-4A0A0J9YYF1 115 aa11.12□□□□□ -0.63
RANBP3-209ENST00000587411 CYSRT1A8MQ03 144 aa11.12□□□□□ -0.63
RANBP3-209ENST00000587411 Q8N3U1 123 aa11.12□□□□□ -0.63
RANBP3-209ENST00000587411 TEX15Q9BXT5 2789 aa11.12□□□□□ -0.63
RANBP3-209ENST00000587411 GVQW2A0A096LPI5 108 aaPredicted RBP11.12□□□□□ -0.63
RANBP3-209ENST00000587411 MRAPQ8TCY5 172 aa11.11□□□□□ -0.63
RANBP3-209ENST00000587411 JMJD1CQ15652 2540 aa11.1□□□□□ -0.63
RANBP3-209ENST00000587411 SNURFQ9Y675 71 aa11.1□□□□□ -0.63
RANBP3-209ENST00000587411 RMI2Q96E14 147 aa11.1□□□□□ -0.63
RANBP3-209ENST00000587411 NAV2Q8IVL1 2488 aa11.09□□□□□ -0.63
RANBP3-209ENST00000587411 TRBV7-6A0A0J9YX20 115 aa11.09□□□□□ -0.63
RANBP3-209ENST00000587411 F8WEM9 126 aa11.09□□□□□ -0.63
RANBP3-209ENST00000587411 COX7BP24311 80 aa11.09□□□□□ -0.63
RANBP3-209ENST00000587411 ATP5EP56381 51 aaPredicted RBP11.09□□□□□ -0.63
RANBP3-209ENST00000587411 SMIM26A0A096LP01 95 aa11.08□□□□□ -0.64
RANBP3-209ENST00000587411 ZNF73O43830 326 aaPredicted RBP11.08□□□□□ -0.64
RANBP3-209ENST00000587411 NBPF19A0A087WUL8 3843 aa11.07□□□□□ -0.64
RANBP3-209ENST00000587411 ELOF1P60002 83 aaKnown RBP11.06□□□□□ -0.64
RANBP3-209ENST00000587411 PTPN13Q12923 2485 aa11.06□□□□□ -0.64
RANBP3-209ENST00000587411 PRR34Q9NV39 138 aa11.06□□□□□ -0.64
RANBP3-209ENST00000587411 ABCA12Q86UK0 2595 aa11.06□□□□□ -0.64
RANBP3-209ENST00000587411 LELP1Q5T871 98 aa11.05□□□□□ -0.64
RANBP3-209ENST00000587411 WFDC11Q8NEX6 87 aa11.05□□□□□ -0.64
RANBP3-209ENST00000587411 TM2D3Q9BRN9 247 aa11.05□□□□□ -0.64
RANBP3-209ENST00000587411 DAD1P61803 113 aa11.04□□□□□ -0.64
RANBP3-209ENST00000587411 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
RANBP3-209ENST00000587411 C6orf48Q9UBA6 75 aa11.04□□□□□ -0.64
RANBP3-209ENST00000587411 MIFP14174 115 aa11.03□□□□□ -0.64
RANBP3-209ENST00000587411 NREPQ16612 68 aa11.03□□□□□ -0.64
RANBP3-209ENST00000587411 SCXQ7RTU7 201 aa11.03□□□□□ -0.64
RANBP3-209ENST00000587411 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
RANBP3-209ENST00000587411 UBR5O95071 2799 aaPredicted RBP11.01□□□□□ -0.65
RANBP3-209ENST00000587411 PRO0628Q9UI54 55 aa11.01□□□□□ -0.65
RANBP3-209ENST00000587411 KLK12Q9UKR0 248 aa11.01□□□□□ -0.65
RANBP3-209ENST00000587411 BPY2O14599 106 aa11.01□□□□□ -0.65
RANBP3-209ENST00000587411 DEFB4AO15263 64 aa10.99□□□□□ -0.65
RANBP3-209ENST00000587411 TMEM254Q8TBM7 123 aa10.99□□□□□ -0.65
RANBP3-209ENST00000587411 FP248Q71RG6 208 aaPredicted RBP10.99□□□□□ -0.65
RANBP3-209ENST00000587411 VPREB1P12018 145 aa10.98□□□□□ -0.65
RANBP3-209ENST00000587411 DEFB135Q30KP9 77 aa10.98□□□□□ -0.65
RANBP3-209ENST00000587411 M0R378 163 aa10.98□□□□□ -0.65
RANBP3-209ENST00000587411 NIPBLQ6KC79 2804 aaeCLIP10.97□□□□□ -0.65
RANBP3-209ENST00000587411 APOC4P55056 127 aa10.97□□□□□ -0.65
RANBP3-209ENST00000587411 LINC00336Q6ZUF6 198 aa10.97□□□□□ -0.65
RANBP3-209ENST00000587411 SONP18583 2426 aaKnown RBP10.96□□□□□ -0.65
RANBP3-209ENST00000587411 KRTAP1-1Q07627 177 aa10.96□□□□□ -0.66
RANBP3-209ENST00000587411 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.66
RANBP3-209ENST00000587411 CELA1Q9UNI1 258 aa10.95□□□□□ -0.66
RANBP3-209ENST00000587411 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
RANBP3-209ENST00000587411 IGKV4-1P06312 121 aa10.94□□□□□ -0.66
RANBP3-209ENST00000587411 OXLD1Q5BKU9 147 aa10.94□□□□□ -0.66
RANBP3-209ENST00000587411 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
RANBP3-209ENST00000587411 CUBNO60494 3623 aa10.93□□□□□ -0.66
RANBP3-209ENST00000587411 SPART-AS1P0CW21 52 aa10.93□□□□□ -0.66
RANBP3-209ENST00000587411 Q8NAQ8 132 aa10.93□□□□□ -0.66
RANBP3-209ENST00000587411 NF1P21359 2839 aa10.93□□□□□ -0.66
RANBP3-209ENST00000587411 FN1P02751 2386 aaKnown RBP10.93□□□□□ -0.66
RANBP3-209ENST00000587411 HTN3P15516 51 aa10.92□□□□□ -0.66
RANBP3-209ENST00000587411 ITPR3Q14573 2671 aa10.92□□□□□ -0.66
RANBP3-209ENST00000587411 OCR1Q9BZK8 76 aa10.92□□□□□ -0.66
RANBP3-209ENST00000587411 ZNF469Q96JG9 3925 aaPredicted RBP10.91□□□□□ -0.66
RANBP3-209ENST00000587411 PRYO14603 147 aa10.91□□□□□ -0.66
RANBP3-209ENST00000587411 KRTAP10-3P60369 221 aa10.91□□□□□ -0.66
RANBP3-209ENST00000587411 A0A0U1RQV1 116 aa10.9□□□□□ -0.66
RANBP3-209ENST00000587411 CCDC168Q8NDH2 2452 aa10.89□□□□□ -0.67
RANBP3-209ENST00000587411 HIGD2BQ4VC39 106 aa10.89□□□□□ -0.67
RANBP3-209ENST00000587411 Q8N9L7 120 aa10.89□□□□□ -0.67
RANBP3-209ENST00000587411 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
RANBP3-209ENST00000587411 SETD2Q9BYW2 2564 aaPredicted RBP10.87□□□□□ -0.67
RANBP3-209ENST00000587411 APCP25054 2843 aa10.86□□□□□ -0.67
RANBP3-209ENST00000587411 Q6ZRU5 148 aa10.86□□□□□ -0.67
RANBP3-209ENST00000587411 TENM4Q6N022 2769 aa10.86□□□□□ -0.67
RANBP3-209ENST00000587411 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
RANBP3-209ENST00000587411 A0A1B0GW54 56 aa10.85□□□□□ -0.67
RANBP3-209ENST00000587411 KRTAP26-1Q6PEX3 210 aa10.84□□□□□ -0.67
RANBP3-209ENST00000587411 GCN1Q92616 2671 aaKnown RBP10.83□□□□□ -0.68
RANBP3-209ENST00000587411 IGLV5-48A0A075B6I7 105 aa10.82□□□□□ -0.68
RANBP3-209ENST00000587411 F8WDY8 70 aa10.82□□□□□ -0.68
RANBP3-209ENST00000587411 C3orf84H3BNL1 204 aa10.82□□□□□ -0.68
RANBP3-209ENST00000587411 C15orf56Q8N910 161 aa10.82□□□□□ -0.68
RANBP3-209ENST00000587411 KCNQ1DNQ9H478 68 aa10.81□□□□□ -0.68
RANBP3-209ENST00000587411 FLNAP21333 2647 aaKnown RBP10.81□□□□□ -0.68
RANBP3-209ENST00000587411 C1orf43Q9BWL3 253 aa10.81□□□□□ -0.68
RANBP3-209ENST00000587411 ESRGQ1W209 222 aa10.81□□□□□ -0.68
RANBP3-209ENST00000587411 Q6ZTC4 211 aa10.8□□□□□ -0.68
RANBP3-209ENST00000587411 NBEAL2Q6ZNJ1 2754 aa10.8□□□□□ -0.68
RANBP3-209ENST00000587411 KPRPQ5T749 579 aaPredicted RBP10.8□□□□□ -0.68
RANBP3-209ENST00000587411 WFDC10BQ8IUB3 73 aa10.8□□□□□ -0.68
RANBP3-209ENST00000587411 Q8N377 158 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms