RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 TRAV26-2A0A0B4J265 109 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 TRBV10-2A0A0K0K1G8 114 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 GAGE12JA6NER3 117 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 J3QQQ9 107 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 M0R2P5 195 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 COX6CP09669 75 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 CHTF8P0CG12 524 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 LGALS3P17931 250 aaKnown RBP7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 GAGE4Q13068 117 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 SPACA4Q8TDM5 124 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 COPS9Q8WXC6 57 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 C1orf43Q9BWL3 253 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
SMARCA4-211ENST00000586921 TIMM17BO60830 172 aa7.89□□□□□ -1.15
SMARCA4-211ENST00000586921 PIK3CD-AS1Q5SR53 167 aa7.89□□□□□ -1.15
SMARCA4-211ENST00000586921 ZFP2Q6ZN57 461 aa7.89□□□□□ -1.15
SMARCA4-211ENST00000586921 AMELXQ99217 191 aa7.89□□□□□ -1.15
SMARCA4-211ENST00000586921 TMEM126AQ9H061 195 aa7.89□□□□□ -1.15
SMARCA4-211ENST00000586921 PYGO1Q9Y3Y4 419 aa7.89□□□□□ -1.15
SMARCA4-211ENST00000586921 TRBV6-4A0A1B0GX49 114 aa7.88□□□□□ -1.15
SMARCA4-211ENST00000586921 IFITM1P13164 125 aa7.88□□□□□ -1.15
SMARCA4-211ENST00000586921 NDUFV3P56181 108 aaKnown RBP7.88□□□□□ -1.15
SMARCA4-211ENST00000586921 TRBV7-7A0A0K0K1E9 115 aa7.87□□□□□ -1.15
SMARCA4-211ENST00000586921 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
SMARCA4-211ENST00000586921 TMEM170BQ5T4T1 132 aa7.87□□□□□ -1.15
SMARCA4-211ENST00000586921 TRGV11A0A075B6L2 103 aa7.86□□□□□ -1.15
SMARCA4-211ENST00000586921 RNASE3P12724 160 aaKnown RBP7.86□□□□□ -1.15
SMARCA4-211ENST00000586921 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
SMARCA4-211ENST00000586921 TRAV8-4A0A0B4J246 113 aa7.85□□□□□ -1.15
SMARCA4-211ENST00000586921 TSHBP01222 138 aa7.85□□□□□ -1.15
SMARCA4-211ENST00000586921 IGHV3-73A0A0B4J1V6 119 aa7.84□□□□□ -1.15
SMARCA4-211ENST00000586921 C9JAW5 83 aa7.84□□□□□ -1.15
SMARCA4-211ENST00000586921 C14orf178Q8N769 122 aaPredicted RBP7.84□□□□□ -1.15
SMARCA4-211ENST00000586921 PTH2Q96A98 100 aa7.84□□□□□ -1.15
SMARCA4-211ENST00000586921 PSORS1C2Q9UIG4 136 aa7.84□□□□□ -1.15
SMARCA4-211ENST00000586921 A4D1N5 150 aa7.83□□□□□ -1.16
SMARCA4-211ENST00000586921 MGPP08493 103 aa7.83□□□□□ -1.16
SMARCA4-211ENST00000586921 CFAP161Q6P656 301 aa7.83□□□□□ -1.16
SMARCA4-211ENST00000586921 C9orf85Q96MD7 179 aa7.83□□□□□ -1.16
SMARCA4-211ENST00000586921 ZNF22P17026 224 aaPredicted RBP7.82□□□□□ -1.16
SMARCA4-211ENST00000586921 CNBPP62633 177 aaKnown RBP7.82□□□□□ -1.16
SMARCA4-211ENST00000586921 MRPS36P82909 103 aaKnown RBP7.82□□□□□ -1.16
SMARCA4-211ENST00000586921 FAM159AQ6UWV7 190 aa7.82□□□□□ -1.16
SMARCA4-211ENST00000586921 C20orf203Q8NBC4 194 aa7.82□□□□□ -1.16
SMARCA4-211ENST00000586921 RPL39LQ96EH5 51 aaKnown RBP7.82□□□□□ -1.16
SMARCA4-211ENST00000586921 I3L3M4 83 aa7.81□□□□□ -1.16
SMARCA4-211ENST00000586921 CRPP02741 224 aa7.81□□□□□ -1.16
SMARCA4-211ENST00000586921 LINC00694P0DN24 101 aa7.81□□□□□ -1.16
SMARCA4-211ENST00000586921 SUMO4Q6EEV6 95 aa7.81□□□□□ -1.16
SMARCA4-211ENST00000586921 TMEM101Q96IK0 257 aa7.81□□□□□ -1.16
SMARCA4-211ENST00000586921 CHCHD7Q9BUK0 85 aa7.81□□□□□ -1.16
SMARCA4-211ENST00000586921 LST1O00453 97 aa7.8□□□□□ -1.16
SMARCA4-211ENST00000586921 ENHOQ6UWT2 76 aa7.8□□□□□ -1.16
SMARCA4-211ENST00000586921 CXCL5P42830 114 aa7.79□□□□□ -1.16
SMARCA4-211ENST00000586921 TSPEAR-AS2P59090 65 aa7.79□□□□□ -1.16
SMARCA4-211ENST00000586921 MIAQ16674 131 aa7.79□□□□□ -1.16
SMARCA4-211ENST00000586921 IGHV1-58A0A0C4DH39 117 aa7.78□□□□□ -1.16
SMARCA4-211ENST00000586921 TINCRA0A1B0GVN0 87 aa7.78□□□□□ -1.16
SMARCA4-211ENST00000586921 M0QY20 66 aa7.78□□□□□ -1.16
SMARCA4-211ENST00000586921 C2orf82Q6UX34 121 aa7.78□□□□□ -1.16
SMARCA4-211ENST00000586921 GNRH2O43555 120 aa7.77□□□□□ -1.17
SMARCA4-211ENST00000586921 Q1RN00 199 aa7.77□□□□□ -1.17
SMARCA4-211ENST00000586921 Q6ZRP5 223 aa7.77□□□□□ -1.17
SMARCA4-211ENST00000586921 MUSTN1Q8IVN3 82 aa7.77□□□□□ -1.17
SMARCA4-211ENST00000586921 PRR26Q8N8Z3 221 aa7.77□□□□□ -1.17
SMARCA4-211ENST00000586921 TIMM21Q9BVV7 248 aa7.77□□□□□ -1.17
SMARCA4-211ENST00000586921 IGLV4-3A0A075B6K6 122 aa7.76□□□□□ -1.17
SMARCA4-211ENST00000586921 B5MCH6 92 aa7.76□□□□□ -1.17
SMARCA4-211ENST00000586921 TRACP01848 142 aa7.76□□□□□ -1.17
SMARCA4-211ENST00000586921 LINC01547P58512 204 aaPredicted RBP7.76□□□□□ -1.17
SMARCA4-211ENST00000586921 LINC00643Q86TS7 51 aa7.76□□□□□ -1.17
SMARCA4-211ENST00000586921 LITAFQ99732 161 aa7.76□□□□□ -1.17
SMARCA4-211ENST00000586921 IGLV5-45A0A087WSX0 123 aa7.75□□□□□ -1.17
SMARCA4-211ENST00000586921 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.75□□□□□ -1.17
SMARCA4-211ENST00000586921 TRIAP1O43715 76 aa7.75□□□□□ -1.17
SMARCA4-211ENST00000586921 FAM19A3Q7Z5A8 133 aa7.75□□□□□ -1.17
SMARCA4-211ENST00000586921 DAND5Q8N907 189 aa7.75□□□□□ -1.17
SMARCA4-211ENST00000586921 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
SMARCA4-211ENST00000586921 IGKV2-24A0A0C4DH68 120 aa7.74□□□□□ -1.17
SMARCA4-211ENST00000586921 H7C423 109 aa7.74□□□□□ -1.17
SMARCA4-211ENST00000586921 SS18L2Q9UHA2 77 aa7.74□□□□□ -1.17
SMARCA4-211ENST00000586921 A0A1B0GX51 115 aa7.73□□□□□ -1.17
SMARCA4-211ENST00000586921 F5H697 171 aa7.73□□□□□ -1.17
SMARCA4-211ENST00000586921 UQCRQO14949 82 aa7.73□□□□□ -1.17
SMARCA4-211ENST00000586921 NDUFA1O15239 70 aa7.73□□□□□ -1.17
SMARCA4-211ENST00000586921 ANGP03950 147 aaKnown RBP7.73□□□□□ -1.17
SMARCA4-211ENST00000586921 COX6A2Q02221 97 aa7.73□□□□□ -1.17
SMARCA4-211ENST00000586921 Q9UF83 564 aa7.73□□□□□ -1.17
SMARCA4-211ENST00000586921 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
SMARCA4-211ENST00000586921 SLPIP03973 132 aa7.72□□□□□ -1.17
SMARCA4-211ENST00000586921 RPL39P62891 51 aaKnown RBP7.72□□□□□ -1.17
SMARCA4-211ENST00000586921 NDUFA12Q9UI09 145 aa7.72□□□□□ -1.17
SMARCA4-211ENST00000586921 TEX49A0A1B0GTD5 131 aa7.71□□□□□ -1.18
SMARCA4-211ENST00000586921 COX7A2LO14548 114 aa7.71□□□□□ -1.18
SMARCA4-211ENST00000586921 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.18
SMARCA4-211ENST00000586921 HERV-K104P63124 156 aa7.7□□□□□ -1.18
SMARCA4-211ENST00000586921 ZNF56Q15929 161 aa7.7□□□□□ -1.18
SMARCA4-211ENST00000586921 KRTAP26-1Q6PEX3 210 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms